| Entry |
|
|---|
| Name |
(RefSeq) probable helicase with zinc finger domain
|
|---|
| KO |
| K25168 | helicase with zinc finger domain [EC:5.6.2.-] |
|
|---|
| Organism |
cbri Culicoides brevitarsis
|
|---|
| Brite |
Messenger RNA biogenesis [BR:cbri03019]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
134828175
3'-5' decay
Other 3'-5' decay factors
134828175
|
|---|
| SSDB |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
1:2154866..2164777
|
|---|
| AA seq |
1912 aa
MEEETLERAFRAFLDQKDLKSAATAFDEVMSKKNCPSDAMNTALLGRSMVCFESKEYKEV
LSYTNQLVNSLRNAKNTELTVCLARNFSVRASVLLKDPEPLMQDAKKLVETLKSLEQSDK
LTSLATKIDEILDKSTNEQLKSVFSKEHEEIGDICKEIHDILVTELPLDEHTKWLRKRET
TQNGETKEENLAKKVETALTVNEVDEKSSESNSCTYCGISFSDKTELRLHCQTQEHQNVL
MSDEGREWKWRPPPRGHSAESYSLCDNFVENAICHYGNQCADAHGTDELNEWKERLEYRK
TRLQRARETELYGKTYTEQLLDKWYSASSPEKVMKEKIEGVDESCSSELVTTVSSKTSKR
EWVFMLRTKKSIKAVALMQDLHRNHFVIKQILPADVRAKKGGKEAELTSDQEWVAPATEN
KPETENTTVNLEHRVKIVFSTDIYGTFRQSVVFDFGTEPVLVKHICVDVIPVTDADKIQE
IKKEIVNTTAERWCEDNADVVYYQQTSGAHLQNAQYLADVAREKDLFERYPCPRASTFVL
TQTTITEKKLTRHNYRSRMHELLYVEEIARYEQIARYNLTASLKITTNYLLTPSGMATST
AKYSHSGELFALMNLSKDVSEDTSAGRLILNNCASVYVSSKDPPPAGEKRKIYEAVIEDK
GKNMIYLKLSAAAVTGLGLKPDTEFTGDIQFLPNRLSYCEWHQAIDKITDYKIIFPETTV
EPSIPWTPTRQWDSTLDPKLNAKQKEAIMAITTDMKYALPPILLIGPFGTGKTFTLAQAI
KQLLLQPDARILICTHSNSAADLYIKDYLHPWVEAGCEEARPLRVYYHKRWVATVNNIVQ
KYCLIDLNVNMRNFRRPSAEDILKHRIVVVTLSISMELASLDLPKGHFTHILLDEAAQAM
ECEAIMPLALASENTRIVLAGDHMQMSPEIFSNFAKERRLHISLLERLYDHYPSDFPCKI
LLCENYRAHEAIIKYTSELFYEQKLVASGRIPKHEKFYPLTFFTTRGEDVQDKNSTTFYN
NAEVYEVVERVCELRKKWPSAWGKINDQSIGIMTPYADQVFRIRSELRKRRMAGISVERV
LNVQGKQFRAIFLSTVRTRRTCTNNKDTNSNEEVDYGFLSNSKLLNTAITRAQSLVAVVG
DPIALCSIGKCRKIWERFIEICNQNKSLFGITWSLLRSQLDGVELKKTYVLNPLAPEFIP
RALQHEAYLRHQTDHYSHYHHPNQYHHSHQNHFQNYHPPHNYRNAGGPPHNMMSHPNMPP
GGMNHNQIGPPAYGNGPVPHGMHPNLGPGHPPPPQGPNSQQFPYQNPLYYQNQQMIRGPP
PNLQGPQPNAGPPMPFRSTGPGFVNQTPPINMMNQQHAPRTMNMNQNHMYHQPNLLPPRG
PPNQFHPELQVPPVQNVRNQLPPPQQPPLRSPGSHNLQMPYGMQKTQQAPYLPPPPQQQT
PNQMFAPSQQNALPPNLRQSAAPQMSPAPPYAQHFNQEHHIGAPLPNDILNSMRNNAAVA
QQQVVQQKMPYPSLDQQASQARHVENKDFTFLQNVHFPEKLPQIQQQPPSHVHQSHLSSQ
QQLQPHHGASQNHLHSNFGGSHTSDLSSLLPPNMSFYEMALESKDIQLKWFLRLMETQGI
EAANKFTEILRQVPNLMSNSGMNNHQQQPMMPQKTESANDLELDNFFDNLPQPLLKDILG
LSTSNAPNLGSTASHGTGLGSSHLLGNGIMGSHSSKSSVDSELKDSHQSVPLYRRQAGQS
YSSSMASSTSASTKNHSIASSTPDILETNFFESIEKLSQNFTTSLFNQQTFNNDHNGFQA
GLPPLQQLLNQANSQFSHHPANSQQQPRMMNMGSHQMSSQNVQQQQQQRANESVEEMLNR
HNSTTYASVLSGAGAGKQPSANNHGKEDPDKDPFTANLCASRKSNGFYNYFQ |
|---|
| NT seq |
5739 nt +upstreamnt +downstreamnt
atggaggaagagacacttgaacgggcattccgggcgtttctggaccaaaaagacctcaaa
tccgcagcaactgccttcgacgaagtgatgagcaagaaaaattgtccatcggatgcgatg
aacactgcgctgctggggcgttcgatggtctgtttcgagtcaaaagagtacaaggaagtc
cttagctacacaaaccaactcgtcaattcgcttcggaacgcaaaaaataccgaactgacg
gtatgccttgcgagaaatttcagcgttcgagcatcggttttgctaaaagatcccgaaccg
ctgatgcaagatgcgaaaaaactcgtcgagacactaaaatccctcgagcaaagtgacaaa
ttgacatcgttggcaaccaaaatcgatgaaattttggataaatccacgaatgagcaactt
aagagcgtcttttcgaaagaacacgaagaaattggggacatttgtaaagagattcatgac
attctcgtcacggaactccccttggatgagcacacaaagtggctacggaagcgagaaacg
acccaaaatggcgaaacgaaggaagaaaatctcgcgaaaaaggtcgaaactgcgctgact
gtgaatgaagttgacgagaaatcgagcgaaagcaattcttgcacgtattgcggcatcagt
ttcagtgataaaaccgaattgcgattgcattgtcaaacgcaggagcatcaaaatgttctc
atgtcagacgagggtcgcgaatggaaatggcgccctcccccgcgaggccattccgcggaa
tcgtattcgctgtgtgataactttgtcgagaacgcaatttgccattatggcaatcaatgt
gctgacgcgcacggcactgacgagctcaacgaatggaaagaacgtctcgaataccgcaaa
acgcgccttcaacgagcccgcgaaaccgaattatacggcaaaacgtacacggagcaactt
ttggacaaatggtattccgcctcgagccccgaaaaagtgatgaaagaaaagatcgagggc
gtcgacgaaagttgctcaagtgaacttgtgactaccgtttcgtcaaaaacatcgaaacgc
gagtgggtttttatgcttcgcacgaaaaaatccatcaaagcagtcgcgctaatgcaagat
ttgcaccgaaatcacttcgttattaaacaaatactgccggctgatgttcgagcaaagaag
ggcggcaaagaagctgaactcacgtcagatcaggaatgggttgctccggcgacggaaaat
aaaccagagacggaaaatacgacagttaatctcgaacatcgcgtgaaaattgtcttttcg
acggatatttatggaacatttcgtcaatcggtggtttttgatttcggcacggagcccgtt
ttggtcaagcatatttgtgtggatgtcattcccgtaacggatgcggacaaaattcaggaa
attaagaaggaaattgtgaatacgacggcggaaagatggtgcgaagacaacgctgatgtc
gtttattatcaacaaacgtcgggcgcgcatctccaaaatgcccaatatttggcggatgtt
gcccgggagaaggatttgttcgaacgatatccgtgtccgagagcgtcgacgttcgttttg
acgcaaactacgatcacggagaagaaattaacgcgacacaattacagatcgcgcatgcac
gagttgctctacgtcgaagaaattgcccgttacgagcaaattgcgcgctataatctcaca
gcatcactaaaaatcacgacaaattaccttctgacgccgagcgggatggcaacaagcact
gccaaatattcgcattcgggagaattgttcgcgctgatgaacttgagcaaagatgtctcc
gaagatacctccgccgggcgattaattctcaataattgcgcttcggtttacgtttcgtcg
aaggatccgcctcctgcgggcgaaaaaagaaaaatctacgaagctgtcatcgaagataag
ggcaaaaatatgatttacctgaaactttctgcggcggcggtgactggattgggcctcaaa
cccgacacggaattcacgggagacattcaatttctcccaaatcgcctgtcgtactgcgaa
tggcatcaagccatcgacaaaattacggattacaaaataatttttcccgaaacgacagtc
gagccgagtattccgtggaccccaacgcgacaatgggactcaacgttagaccccaaactc
aacgccaagcaaaaagaagcgattatggcaattacgacagacatgaaatacgcgctgccg
ccaattttgttgatcggaccttttggcacggggaagacttttacactggcgcaggcgatt
aaacaacttttgctgcaacccgatgcgcgaattctcatttgtacgcacagtaactcagct
gcagatctttacattaaagattatttgcatccttgggtagaggcgggctgtgaagaggca
cgacccctgcgtgtttattatcacaagagatgggtcgcaacggtgaacaatatcgtacaa
aagtattgcttgatcgatttgaatgtgaatatgaggaattttaggcgtccgagtgcggag
gatattctcaagcatcgcattgttgtcgttactctcagtatttccatggaattggcatcg
ctggatttgccaaaaggtcactttacacatattttactcgacgaagctgctcaagcaatg
gaatgcgaagcaataatgccattagcgctcgcaagtgaaaacacccgcatcgtcttagct
ggcgatcacatgcaaatgtctcccgaaatcttctccaacttcgccaaggaacgtcgtttg
cacatttcgctacttgaacgcttgtacgatcactatccatcggatttcccgtgcaaaatc
ctcctttgtgagaattatcgagcacatgaagccatcatcaaatacacgtcggagctcttt
tacgagcaaaaattggttgcatcaggtcgaatcccgaaacacgaaaaattctatccgctc
acttttttcacgacgcgcggcgaagatgttcaggacaaaaattcgacgacattttacaac
aacgccgaagtgtacgaagtggttgaacgcgtttgtgagctgcgaaaaaaatggcccagt
gcatggggaaaaattaatgatcaaagtattggaattatgacgccgtatgcggatcaagtg
tttcgcatcagatccgagctgagaaaacgtcggatggcgggaattagtgttgaaagagtt
ttaaacgtgcaaggaaagcaatttcgagcgattttcttgtcaactgtgagaacaagacga
acttgcacaaataacaaggacacaaattcgaacgaggaagtcgattatggatttttgagc
aattcgaaattactcaacacagcaatcacgcgagctcaaagtctcgttgctgtggtcgga
gatccaattgccctgtgttcgatcgggaaatgtcgcaaaatttgggaacgtttcatcgaa
atttgcaatcaaaacaagagtttgttcggaattacgtggtctctgctccgttcgcagctc
gacggtgtcgaattgaagaaaacttacgtcttgaatccgcttgcgccggaatttattcct
cgcgcgctgcaacacgaggcatatttgcgacatcaaacggaccattacagtcattatcat
catccgaatcagtatcatcactcgcatcaaaatcactttcagaactaccatccgccccat
aattatcgcaatgcgggaggaccgccgcataacatgatgtcacatccgaatatgccgccc
ggcggtatgaatcacaatcaaattggacctccggcatacgggaatgggcctgttccgcat
ggcatgcatccaaatttgggtccgggacatccgccgccgccgcagggaccaaattcgcaa
cagtttccttatcagaatccgctctactatcaaaatcagcaaatgattcgcgggcctccg
cctaatttgcagggtccgcaacccaatgcgggacctccgatgccctttagatcgacaggt
cccggatttgtgaatcaaacgcctccgataaacatgatgaatcaacaacatgcgccgcga
acaatgaatatgaatcaaaatcacatgtatcatcaaccgaatttacttcctccgagagga
cctccgaatcaatttcatccagaattacaagttcctcccgttcaaaatgttcgtaaccaa
ttaccgcctccgcaacaacctcccttacgaagtcccggatctcacaatctccaaatgcct
tacggaatgcaaaagacacaacaggcgccttatttgccgccgccgccgcaacaacaaacg
cccaatcaaatgttcgcgccatcccaacaaaacgcattgccgcccaatttacgtcaatcc
gcagcgccgcaaatgagtccggcacctccgtacgcccagcatttcaaccaagagcatcac
attggagctcccttgccgaacgacatcctgaactcgatgcgaaataacgccgctgtggcc
cagcaacaagtcgttcagcaaaaaatgccgtatccgtcactcgatcaacaagcatcgcag
gcacgtcatgtcgagaacaaagattttacttttctccaaaatgtacattttcccgaaaaa
ttgccgcaaattcaacaacaacccccgtcgcatgttcatcaaagtcatttgtcgtcgcaa
caacagcttcagccccatcatggcgcttcgcaaaatcatcttcattcgaatttcggagga
agtcacacgagcgatttaagtagtcttttgccgccgaacatgagtttttacgaaatggcg
ctcgaatcgaaggatattcagctgaaatggttccttcgcttgatggaaacgcaaggaatc
gaagcagccaataaatttacggaaattttgagacaagtcccgaatctcatgtcgaattcc
ggcatgaataatcatcaacagcaaccgatgatgccacaaaaaacggaatctgccaacgat
ttggagctcgataactttttcgataatttgccgcaacccttgctgaaagacattctcggc
ttatcgacaagtaacgcaccgaatttgggttcaacagcatctcacggaacgggtttgggt
tcttcacatctcctcggaaacggaattatgggaagtcattcgtccaaaagtagcgtcgac
agcgaattaaaggattcgcatcaatcggtgccgctttatcgacgtcaagcagggcaaagt
tacagcagtagcatggcatcatcgacctccgcatcgacaaaaaatcactcaattgcgtca
tcgacacccgacattctcgagacaaactttttcgagtcgattgaaaaattatcgcaaaat
ttcacgacgtcacttttcaatcagcaaaccttcaataacgaccataatggcttccaagca
ggccttccgccattacagcaacttctgaatcaagcgaattcgcaattttcgcatcatccc
gcgaatagtcagcaacaaccacgtatgatgaacatgggaagtcatcaaatgtcgagtcaa
aatgtgcagcagcagcagcaacaacgcgccaacgaatctgtcgaggaaatgcttaatcgt
cacaattcgacgacatatgcgagcgttttgagtggcgcgggcgcaggtaagcaaccgtca
gcgaataatcatgggaaagaggatccggataaagatccatttactgctaatttgtgtgct
tctcgcaaaagtaatggattttacaattattttcaataa |
|---|
