Culicoides brevitarsis: 134828952
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Entry
134828952 CDS
T10947
Name
(RefSeq) collagen alpha-1(I) chain
Organism
cbri Culicoides brevitarsis
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GFIT
Other DBs
NCBI-GeneID:
134828952
NCBI-ProteinID:
XP_063698012
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Position
2:31400588..31409088
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AA seq
1675 aa
AA seq
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MLRSNWIKILIVAVVVDAALIREQNLPENELLRVKREPAKGKFRGQTQSQYMNFGTEEDG
KAEAEATVTSSRAVVSGKNGMGQAQSQSTGSDCGSECCGADCGRSRGDDYYAEKRPDPLR
SRSDGVIGQDSRSSYPGGGSLVTGPPGRRIEDHVNGRPPVNVPIQGGTTGLVDAYGRPIQ
GGSTVPVDAHGRPIQGGSTVPVDAHGRPIQGGSTVPVDAHGRPIQGGSTVPVDAQGRPIQ
GGTTGFVDAQGRPIQGGSTVPVDAHGRPIQGGSTVPVDAHGRPIQGGTTGFVDAQGRPIQ
GGSTVPVDAHGRPIQGGSTVPVDAHGRPIQGGTTGLVDAQGRPIQGGSTVPVDAHGRPIQ
GGTTGLVDAQGRPIQGGSTVPVDAQGRPIQGGSTVPVDAQGRPIQGGSTVPVDAHGRPIQ
GGSTVPVDAHGRPIQGHGGETIGADGTPMHGGVDAQGRPIGPHSTTVDAHGRPVDSQGRP
IASHHDGRGDIPGHLGGSITADSSHRMPDRNLINESGSHHRKYTERTHFITVPGTNQHVV
NPNEGMTVLIGTGNPRQSVVGSTGPVQVYSGPDDGKSAPHQTVHAKEGGLTVLIGTGGPT
QTVVHAPSSGIGPDGKPCVPVPALPGGEFRQVPSGHQVVGPSVTHPSHVPGTQTHGSQYP
QGPITHALIPGQQGTGGQTYAPGSQGYAPGSQVYAPAGQTTTGYTPGSQTYAPGSQVYAP
GSQGYAPGSQGFAPGSHGYAPGSQTYAPGSQGYAPGGQTTTGYAPGSQTYAPGSQVYAPG
SQGYAPGSQGYAPGSQIYAPGSQGYAPGSQGYAPGGQTSTGYAPGSQTYAPGSQVYAPGS
QGYAPAGYAPGGQGYAPGSQGYAPGGQTSTGYAPGSQGYAPGSQGFAPGSQGYAPGSQGY
APGGQTSTGYAPGSQTYAPGGQTYAPGSQGYAPGSQGFAPGSQGYAPGGQTTTGYAPGSQ
GYAPGSQTFAPGSQGYAPGSQVYAPGSQGYAPGSQGYAPGSQGYAPGGQTTTGYAPGSQG
YAPGSQVYAPGGQTTTGYAPGSQGYAPGSQGYAPGSQGYAPGGQTSTGYAPGSQGYAPGS
QGYAPGSQGYAPGSQGYAPGGQTTTGYAPGSQVYAPGSQVYGPGGQTGSQGSYAPGIPSY
SQVLLPGQVQPSYVPGHGQVIPQTQGGSIIARPGAKVTGDKELASGEVPEEDDDSFSLAE
TSIKEGAVSAAAQGRKNGGTAKTEVSGSYKDGGSFSASAQTSDSDRGAQVQVQGGKEGAQ
TSAQGTGGAAQSQSQLSVNAKTGATSATAQSSGIKHESESEVEASEKGGLADAQAEGPGR
TSSQAQIGFKPIDESEVQDNHIFNGGGQSSASSTKYSGQSQSQINGKFKFGISYHGASQS
ASGSKDHVAKYREQNKLVFQKISSLQQATKKAEADSEASGTKQRSQQTASFTTKKPEEYS
AEPEEYDEEEDEEDYEEQEYPVMEREGGLPQVKSSTVDDKDDTDEMELPVSTTTTARPRV
NFKAHTLPPKAKIFNQSSPGQKQTAVVANPDEKFKLVQTQNGRSTYHPRQQSTTTEKVPS
GFKEIEKKETPKALSQKQERKEVVTTKFLPSKASAQEIDKTKMPDSFVTVTKQVTGVNED
KKPGKLPGIEGKNFESTYYTKSSTCGYFTFTCNIVYGANGRSKICRPKPPTNGKC
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgatcaaattggattaaaatactgattgtggcagttgtggttgatgctgccctt
attcgggagcaaaatctgccagaaaatgaactacttcgcgtgaaacgagaaccggctaag
gggaaattcagggggcaaacacaatcgcaatacatgaactttggtactgaagaggatggc
aaagcagaagctgaggcgacagttacgtcatcacgtgcggtagtttccggcaaaaatggc
atgggacaagcacagagtcagtcgacgggatctgattgcggatctgaatgttgcggcgct
gattgcggaagaagcagaggagatgattattatgcggagaagcgtcctgatccattgaga
agtcgttctgatggagtaattgggcaagattcaagatcaagttatcccggcggtggatcg
ttagttacaggacctcctggaagaagaattgaagatcacgttaatggaagacctccagtt
aatgttcctattcaaggaggaacaacaggacttgtagatgcttatggaagaccaattcaa
ggaggttcgacagtacctgttgatgctcatggaagaccaattcaaggaggttcgacagta
cctgttgatgctcatggaagaccaattcaaggaggttcgacagtacctgttgatgctcat
ggaagaccaattcaaggaggttcgacagtacctgttgatgctcaaggtagaccaattcaa
ggaggaacaacaggatttgttgatgctcaaggaagaccaattcaaggaggttcgacagta
cctgttgatgctcatggaagaccaattcaaggaggttcgacagtacctgttgacgctcat
ggaagaccaattcaaggaggaacaacaggatttgttgatgctcaaggaagacccattcaa
ggaggttcgacagtacctgttgatgctcatggaagaccaattcaaggaggttcgacagta
cctgttgacgctcatggaagaccaattcaaggaggaacaactgggcttgttgatgctcaa
ggaagaccaattcaaggaggttcgacagtacctgttgatgctcatggaagaccaattcaa
ggaggaacaactgggcttgttgatgctcaaggaagaccaattcaaggaggttcgacagta
cctgttgatgctcaaggaagaccaattcaaggaggttcgacagtacctgttgatgctcaa
ggaagaccaattcaaggaggttcgacagtacctgttgacgctcatggaagaccaattcaa
ggaggttcgacagtacctgttgacgctcatggaagaccaattcaaggacatggcggagaa
actattggagctgatggaactccaatgcatggaggcgttgatgcgcaaggtcgcccaatt
ggtcctcattcaacaacagttgatgctcatggtcgtcctgttgattcacaaggcagacca
attgcttctcatcatgatggtcgaggagatattcccggacatcttggaggatctataacc
gcagattcatcccaccgaatgcctgatagaaacttaattaacgaatcaggatctcatcat
agaaaatacactgaaagaacacatttcattacagttcccggcacaaaccaacatgttgta
aatccaaatgaaggtatgacagttctcattggaacaggaaatcctcgacaaagtgttgtt
ggttctacaggccctgtacaagtttattcaggacctgatgatggaaaaagtgctcctcat
caaactgttcatgcaaaagaaggaggattaactgttcttattggaacaggaggaccaaca
caaacagttgttcatgcaccaagttcaggaattggacctgatggaaaaccttgtgttcct
gttccagcattgccaggaggtgaatttagacaagtaccatcaggacatcaagttgttgga
ccttctgtaacacatccatcacatgttcctggaacacaaacgcacggttcgcaatatcct
caaggtccaattacacatgcacttatccccggacaacaaggaacaggaggtcaaacatat
gctcctggaagtcaaggatacgctcctggaagtcaagtatacgctcccgcaggtcaaact
actacaggatatactccgggaagtcaaacatatgctcccggaagtcaagtttatgctccc
ggaagtcaaggatacgctcctggtagtcaaggattcgctcctggcagtcacggatatgct
cctggaagtcaaacatatgctccaggaagtcaaggatacgctcccggaggtcaaactact
acaggatatgctccgggaagtcaaacatatgctccaggaagtcaagtttatgctcccgga
agtcaaggatacgctcctggtagtcaaggatacgctccaggaagtcaaatttatgctccc
ggaagtcaaggatacgctcccggtagtcaaggatacgctcccggaggtcaaacttctaca
ggatatgctccgggaagtcaaacatatgctccaggaagtcaagtttatgctcccggaagt
caaggatacgctcccgcaggatatgctccaggaggtcaaggttacgctcctggaagtcaa
ggatacgctcccggaggtcaaacttctacaggatatgctccgggaagtcaaggatacgct
cctggaagtcaaggattcgctcctggaagtcaaggatacgctcctggaagtcaaggatac
gctcccggaggtcaaacttctacaggatatgctccgggaagtcaaacatatgctccagga
ggtcaaacatatgctcctggcagtcaaggatacgctcctggaagtcaaggattcgctcct
ggaagtcaaggatacgctcccggaggtcaaactactacaggatatgcgccgggaagtcaa
ggatacgctcctggaagtcaaacatttgctccaggaagtcaaggatacgctcctggaagt
caagtttatgctcccggaagtcaaggatacgctcctggaagtcaaggatacgctcctgga
agtcaaggatacgctcccggaggtcaaactactacaggatatgctccgggaagtcaagga
tacgctcctggaagtcaagtatacgctcccggaggtcaaactactacaggatatgctccg
ggaagtcaaggatacgctcctggaagtcaaggatacgctcctggaagtcaaggatacgct
cccggaggtcaaacttctacaggatatgctccgggaagtcaaggatatgctcctggaagt
caaggatacgctcctggaagtcaaggatacgctcctggaagtcaaggatacgctcccgga
ggtcaaactactacaggatacgctcctggcagtcaagtatacgctcctggaagtcaagtt
tacggacccggaggtcaaacaggatctcaaggaagttatgctcctggcataccttcttat
agccaagttttattaccaggacaagtacaaccttcttatgttccgggacatgggcaagta
attccccaaactcaaggcggaagcattattgcaagacctggcgctaaagttacaggcgac
aaagaattggcaagcggcgaagtccccgaagaagatgacgattcattctcgttagctgaa
acatcgatcaaagaaggagctgtttcagcagctgctcaaggtcgcaaaaatggaggaaca
gctaaaacagaagtttctggttcgtacaaagatggcggaagctttagcgcaagtgcacaa
acatctgattcggatcgaggagcacaagttcaagttcaaggaggcaaggaaggcgcacaa
acatctgctcaaggcacaggcggagcagcccaatctcaatctcaattgtccgttaacgct
aaaactggagcaacttctgctacagctcaaagctcaggaataaaacacgagagcgaatcc
gaagttgaagcaagcgaaaagggaggtttagctgatgctcaagctgaaggacctggaaga
acttcatcacaagcacaaattggtttcaaacctattgacgaaagcgaagtacaagacaat
cacattttcaatggcggaggacaatcttctgcttcttctacaaaatactctggccaatct
caatctcaaatcaacggaaaattcaaatttggaatttcttaccatggagcttctcagagt
gcatcaggatcaaaagatcacgtcgccaaatatcgtgaacagaacaaattagtcttccaa
aagatctcatctttgcaacaagctaccaagaaagcagaggctgattccgaagcatctggc
acaaaacaacgttcacaacaaactgcctcattcacgactaaaaagcccgaagagtattcc
gctgaacccgaagagtacgatgaagaagaagacgaagaagattacgaagaacaagaatat
cccgtgatggaacgcgaaggaggccttcctcaagtaaaatcgagcacagttgacgacaaa
gatgacaccgacgaaatggaattgcccgtttcaacaacaaccacagctcgtcctcgtgtc
aacttcaaagctcacacgttgccacccaaagcgaaaatcttcaatcaatccagtccggga
caaaaacaaactgctgtcgtcgccaaccccgatgaaaaattcaaactcgttcaaacacaa
aacggtcgttcgacataccatccacgccaacaatccacaactacggaaaaagttccctcg
ggcttcaaggaaatcgaaaagaaggaaactcccaaagccttgtcgcaaaaacaagaacgc
aaagaagttgtaacgacaaaattcctaccctcaaaggcaagcgcccaagaaatcgacaaa
accaaaatgcccgatagcttcgtaactgtcacgaaacaagtgactggcgtgaacgaggac
aagaaacccggcaaattgcccggcattgaaggaaagaactttgaatcgacttattacaca
aaatcatcaacttgtggctactttacgttcacatgcaacatcgtttatggcgccaatggc
agaagtaagatttgtcgaccaaagccgccaactaacggaaagtgctaa
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integrated database retrieval system
