Culicoides brevitarsis: 134829271
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Entry
134829271 CDS
T10947
Name
(RefSeq) transcription factor Sox-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
cbri Culicoides brevitarsis
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbri03000
]
134829271
Transcription factors [BR:
cbri03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
134829271
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
134829271
NCBI-ProteinID:
XP_063698359
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All DBs
Position
2:complement(14053726..14055653)
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AA seq
454 aa
AA seq
DB search
MLTMESDMKGGILHATMPPHHPSSLHSHGYGSLGPLSMMNLGQHQQQHLSHTNNYHSPHQ
AGISPGNSVVQNTSPSGIPSHHISSSTGHGHGGHGGHHMSGMNNNNNNTSASKAAAQAAA
DRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSETEKRPFIDEAKRLR
AVHMKEHPDYKYRPRRKTKTLTKNKEKYPMGVGGLLQTGESTQSTGGSTRNSSSHASSGA
QSTGSNRDMYQMPPNGYMPNGYMMHDPSSAAAYQSQQHAAAYMSNYPRYDMSQMHSGSAG
SLNTYMNAAAGYGMYGTVSGGQTSPYSLHQAPSSPYNSSSGVQQQAPGSPYGLNQQSCQS
HSPSDSSVKSEPVSPSPTNNNLLKQRDYVQQQQQQQVVQPAGGDLNHLINMYGVPEGMQQ
EHQRNLMHHYQQSVSPELHQQQQNLRTMAPLTHM
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgttgactatggaatctgacatgaaagggggaattttacacgcgacaatgcccccacat
cacccgtcatctttgcattcgcacggctacggaagtctcgggcccctgtcgatgatgaac
ttgggccagcaccaacaacaacacttaagtcacacaaataactaccattcgccgcaccaa
gcgggcatcagccccggcaattctgtcgtgcaaaatacttcgccatccggcatcccatcc
catcacatttcctcgagtacgggacacgggcatggcgggcacggagggcatcatatgagt
ggcatgaacaataataacaacaacacatccgccagcaaggcagctgctcaagcagcagcg
gatcgcgtcaaacgtcccatgaacgcgttcatggtttggtcacgagggcaacgccgcaaa
atggcttcggacaatccaaagatgcacaattccgagattagtaaacgactgggagcgcaa
tggaaagatctcagtgaaacggaaaagagaccatttattgacgaggcaaaacgtttaaga
gccgttcacatgaaggagcatcccgattacaaatatagaccacgacgaaaaaccaaaacg
ctgacaaagaacaaggaaaagtatccgatgggtgttggaggtttgttgcaaacgggcgaa
tcgacacaaagcacaggcggttcgacgcgtaactcgtcgtcgcatgccagctcgggagcc
caaagtacgggcagtaatcgcgatatgtatcaaatgccaccgaacggatacatgccaaat
gggtatatgatgcatgatccgtcttcggcagcagcgtaccaaagtcaacagcatgccgct
gcctacatgagcaattatcctcgctacgacatgagtcaaatgcattcgggcagtgccggg
agtctcaatacttatatgaatgcggcggcaggttatggcatgtatggcacagtttccggt
ggtcaaacgtcgccctatagtttgcatcaggcgcccagttctccgtacaacagctcgagc
ggcgtacaacaacaagcacctggatcaccatatggcctcaatcaacagtcctgccaaagt
cacagtcccagtgattccagcgtgaaatccgaaccggtatcgccgagtcccacaaacaac
aatctcctcaagcagcgcgattatgtgcagcagcagcagcaacaacaagttgttcagcca
gcgggcggcgatctgaatcacttgattaacatgtatggcgtcccggagggcatgcagcaa
gaacaccaacgcaatcttatgcatcactaccagcaaagtgtgtcgcccgaactgcatcag
caacaacaaaacctacggacaatggcacccctaacgcacatgtga
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