KEGG   Culicoides brevitarsis: 134829625
Entry
134829625         CDS       T10947                                 
Name
(RefSeq) negative elongation factor B
  KO
K15180  negative elongation factor B
Organism
cbri  Culicoides brevitarsis
Pathway
cbri03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cbri00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    134829625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cbri03021]
    134829625
Transcription machinery [BR:cbri03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     134829625
SSDB
Motif
Pfam: COBRA1 RNA_pol_Rpb1_1
Other DBs
NCBI-GeneID: 134829625
NCBI-ProteinID: XP_063698871
LinkDB
Position
2:complement(37452025..37454155)
AA seq 591 aa
MSTSTRTGGTALEEVDIPGQAYLREALTSCIDPLKAIETFQLENGILLPSLRPMLPLLDL
HGVKRLDFHNSVLEELRDKLVQQISQLGEKGGKERDKKLKDLLVKSFPVVRVKALRPVVM
SILKNIPHIEDKYLRILVRDRELYADTDTEVKRQIWRDNQSLFGDEVSPLLSQYIREKEN
VLFDHTNLNNLFFTPTPKTRRQEDVVQKLAHMIGNSVKLYDMVLQFLRTLFLRTRNVHYC
TLRAELLMALHDLDVQEIITVDPCHKFTWCLDACIREKSVDIKRSRELQGFLDNIKRGQE
QVLGDLSMTLCDPFSINFLATSAIKILLHLQNTEALPRENTVLILLLRMLALGLSAWIMI
DSQDFKEPRLDNQVVTKFLPALMSLMVDDQVRYLHSRLPPDERESAITIIEHSGPAPETI
ETFIQEGTVASILAMYYTLHTAKQKDKVGLLRILAVLSSCKDDRAYEDPFLHSLVASLIN
MADEFANEDFCTVLFDEFLFAGLTRDNVTRHMLKLLWYIHAKLPPTRLQTMMKALQPTVN
HHENVHKLYEALNVKIGGAPSTNPAGHDGISQSTPMEMDVDSPLKDVLRMQ
NT seq 1776 nt   +upstreamnt  +downstreamnt
atgagcacaagtacgagaactggcggcacagctctcgaagaagtcgatattccggggcaa
gcttatctgcgggaagcattaacgagttgtattgatcctctaaaagcgattgaaacattc
caactcgaaaacggaattttactcccgtcactgcgcccgatgttaccgcttctcgacttg
cacggcgtgaaacgtttagatttccataattccgtgttggaagagcttcgggacaagctt
gtgcaacaaatttcgcaactcggcgagaagggcggcaaagaacgcgataaaaaactcaaa
gatttgctcgtcaaaagcttccccgtggtccgtgtcaaagctttacgtcccgttgtgatg
tcaattttgaagaatattccgcacatcgaggacaaataccttcgaattttggtccgggat
cgtgaattatacgccgataccgatacggaggtcaaacggcaaatttggcgcgacaaccaa
agtttgttcggagacgaagtttcgccacttttgtcgcaatacatccgcgaaaaggagaac
gttctcttcgatcacaccaatttaaacaatttatttttcacgccgaccccaaaaacgcgt
cgccaagaggatgtcgtgcaaaaactcgctcacatgatcggcaacagtgtcaaattatac
gacatggtgcttcaatttttacgaactttgttcctccggacacgaaatgttcattattgc
acgttacgagcggaacttttgatggcgctgcatgacttggatgtccaggaaatcatcacc
gtggatccgtgtcacaaatttacgtggtgcttggatgcctgtatccgcgaaaaatccgtc
gatatcaagagatctcgtgagttgcaaggatttttagacaatattaagcgaggacaggaa
caagttttgggcgatttatcgatgacgttgtgcgatccgttttcgataaattttttagcg
acctcagcgattaaaattttgctccatctgcaaaatacggaggccctgccgcgcgaaaat
acggtcctgatactgcttttgaggatgttggcgctcggtttaagcgcctggatcatgatt
gacagtcaagatttcaaggaaccccgtttagataatcaagttgtgacgaaattcttacct
gcgttgatgtctttgatggttgacgaccaagttcggtacttgcattcacgattgccgccc
gatgagcgtgaaagtgcgatcacaattattgaacattcgggtcctgcgcccgaaactatc
gaaactttcatccaagaaggcaccgtagcttccattttagccatgtactatacgctccat
acggcaaaacaaaaagataaagtcggtttattgcgaattttggcagttttatcgagttgc
aaggacgatcgcgcttacgaagatccatttttgcactccctcgtggcgtcgctgatcaac
atggcggacgaattcgcaaatgaggatttttgtacggtacttttcgatgaatttttgttc
gctggattgaccagagataatgtcacgagacacatgttgaagcttttgtggtatattcat
gcgaaattgccgcccacgagactgcaaacgatgatgaaggcacttcagccgacggtgaat
catcatgaaaatgtccataaattgtacgaagcgctaaatgtgaagattggaggagcgcca
tcgacaaatccagcgggacatgatgggatatcgcaatcgacgccgatggaaatggatgtc
gattcgccgctgaaggacgtcttgaggatgcaataa

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