Culicoides brevitarsis: 134829635
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Entry
134829635 CDS
T10947
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
cbri Culicoides brevitarsis
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbri03041
]
134829635
03036 Chromosome and associated proteins [BR:
cbri03036
]
134829635
Spliceosome [BR:
cbri03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
134829635
Chromosome and associated proteins [BR:
cbri03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
134829635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
Suf
HAT_PRP39_C
RRM_occluded
RRM_7
Lsm_interact
HAT_Syf1_CNRKL1_C
RRM_3
HAT_Syf1_CNRKL1_N
RRM_5
DIRP
NRDE-2
RRM_MARF1
Motif
Other DBs
NCBI-GeneID:
134829635
NCBI-ProteinID:
XP_063698935
LinkDB
All DBs
Position
1:2130237..2133158
Genome browser
AA seq
853 aa
AA seq
DB search
MSEEKEDMEVVEIDDDTLSSESEDEEADNQNLLLYLEALQRINENKYSYNDYIQLVDVSF
KISDLDKIREAYDLFAAVFPIAPNLWAKRLKIESSLASTEEDLVYVDKLYKKALGDYFCA
EIAFEYADFLIKLPNPVNFWNEILYPYALDCMKGSQIFKLWRENVYEELEETPEKPQAIC
DFFESEIELPLFALDDTFLEFKSFYETHKEQLSTCDWSKIEEKYQKTRKTLQLILPFEKK
LNQLDKGSHQDRANLYREYIETCRKSLPTKIVVVLYERMVTDCCLDANVWLDYVTFLQEN
KDSMEKLRSEHNSVVFRQTPLDVINRSLRNCTWSHLLYIEKMRIMEQNDAKWEDVQTILE
EATVAGFQTPEPIVSIWLEYLTYLARKTDFQKDTERENLRRNFQFAWDTLGRDWGALADS
QCKILQYWSKLEYGKLGSAVKGRDLWYTVMESSDNSTKASLWIEFAYLELQRGLEAARKI
YKKAVSTPNMDDLESLVSSWIQFERCYGSLAQLKSCQEYCLPILAHHRHRKQTKGSRKGD
EKPQKGAKNEENRKSDTKTTKRKNQEEENAGNSEDKGKKKLKAAETDDELPCALEHVKLN
QDLHKEGDTEIDKSKDHVTVFFSNLNYDITEDRIKASFPELSIKNVNLIKNATGKTRGYG
YIELDSELEVEKALALDRKELDGRPVYISKINRDKSERQKFRYATDLEPNKLFVRGLPFE
MTQEQVHELFAKYGKLKDVRLVVHKSGKSKGFAYVEFENKNDASNAILKLDQTDLQGFKL
QVAISAPPPRAKQETKRREFPVNLGGAKRQVHQGDAKPRISLIPMSVQKKVLGAETQNKP
KSNEEFRKMLLNK
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaggaaaaggaagatatggaagttgtcgagatcgacgacgatacattgtcttct
gagagcgaagatgaagaagccgacaaccaaaatcttctcctgtacctcgaggcgcttcag
agaatcaacgagaacaagtacagctataacgattacatccaactcgtcgatgtttcattt
aaaatttctgacttggataaaattcgtgaggcatacgatttattcgctgcagtttttccc
attgccccgaatttgtgggctaaaaggcttaaaatcgagtcttcgctggcttcgacggaa
gaagatctcgtttatgtcgataaattatacaaaaaagccctcggggattacttttgtgct
gaaatcgccttcgaatatgcggattttttgatcaaacttcccaatccggtcaacttttgg
aacgaaattttgtatccttatgccttggattgcatgaaagggtcgcaaattttcaaactt
tggcgtgaaaatgtatatgaagagctcgaagagacgccggaaaagcctcaagccatatgt
gatttcttcgaaagtgagattgagctgcctttattcgcgcttgacgatacttttttggag
tttaaatcgttttacgagacgcataaggagcaactttcgacctgtgattggagtaaaatc
gaagaaaaatatcaaaaaacacgaaaaactttacaactaatcttaccttttgagaaaaaa
ttgaatcagctcgataagggaagtcatcaggaccgtgccaatttgtatcgtgaatacatc
gagacgtgtcgaaaaagtcttccaacgaaaattgtcgttgttttgtacgaacgaatggtc
accgattgttgcttggatgccaatgtttggttggattacgtcacttttttgcaagaaaac
aaagattctatggaaaaacttcgttccgagcacaattctgtggtttttcgacaaacgccg
ctcgatgttataaatcgctcgttgcgaaattgcacatggagtcacttgttgtacatcgaa
aaaatgcgaattatggagcaaaatgacgcaaaatgggaagatgttcaaacaattttggaa
gaagcaactgtggcgggcttccaaacgcccgaaccgatcgtcagtatttggctggagtac
ctcacatatctcgcccggaagacagattttcaaaaagacaccgaacgagagaatctccgg
cgcaattttcagttcgcatgggacactttaggacgagattggggcgctttagcggattcg
caatgcaaaatcctgcaatattggagcaagctggagtatggaaagttgggaagtgcagta
aagggacgcgatttgtggtataccgtcatggaaagttcggataattcgacgaaagcgagt
ctctggatcgaatttgcgtatcttgaactgcaacgaggactcgaagcagcacgaaaaatc
tacaaaaaagcagtttcaaccccaaatatggatgatttggagtctcttgtgtcttcgtgg
atccaatttgagcgttgttacggttcattggctcagttaaagtcgtgtcaggaatattgt
ttgcccattttagcgcatcatagacaccgaaaacagacaaagggatcgagaaaaggcgat
gaaaagccccaaaaaggcgcgaaaaatgaggaaaatcgaaaatctgacacgaaaacgacc
aaaagaaagaatcaagaggaagaaaatgcgggaaattccgaagataaaggcaaaaaaaag
ttaaaagcagctgaaacggatgatgaattgccgtgtgcgttggagcatgtgaagctaaat
caagacctacacaaggaaggggatacggaaatcgataaatccaaagatcacgtgacagtt
ttctttagcaatcttaattacgacatcaccgaagatcgtataaaggcgagttttccggaa
ttgtcgatcaaaaatgtaaatttaatcaaaaatgcgacaggaaaaacgcgtggatacggt
tatatcgagttagactcagagttagaagttgaaaaagccctcgctctcgatcgcaaagag
ctcgatggacgtcccgtgtacatttccaagataaatcgggacaaaagtgaacgtcaaaaa
ttccgttacgccacagatttggagccaaataagctttttgtgcgtggtttgcccttcgaa
atgacccaagaacaagttcacgagctcttcgccaaatacggaaaactcaaggacgttcgt
ttagtcgtgcataaaagcggaaaatccaagggattcgcatatgtcgagtttgagaacaaa
aatgacgcgagcaatgcaatactgaaactcgatcaaacggatttgcaaggctttaaattg
caagttgccatttcggcgccgcctccgagagcgaaacaggaaacaaaacggcgtgaattt
cccgtgaatttgggcggagcgaagagacaggtacatcaaggagatgctaagccgagaatt
tcgttgattccgatgagtgtgcagaagaaagttcttggcgccgagacacaaaacaagccg
aagtcgaatgaagagtttagaaaaatgcttttgaacaagtaa
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