KEGG   Culicoides brevitarsis: 134829857
Entry
134829857         CDS       T10947                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
cbri  Culicoides brevitarsis
Pathway
cbri03030  DNA replication
cbri03410  Base excision repair
cbri03420  Nucleotide excision repair
cbri03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cbri00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    134829857
   03410 Base excision repair
    134829857
   03420 Nucleotide excision repair
    134829857
   03430 Mismatch repair
    134829857
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cbri03032]
    134829857
   03036 Chromosome and associated proteins [BR:cbri03036]
    134829857
   03400 DNA repair and recombination proteins [BR:cbri03400]
    134829857
DNA replication proteins [BR:cbri03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    134829857
  DNA Replication Termination Factors
   ELG1-RFC complex
    134829857
Chromosome and associated proteins [BR:cbri03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    134829857
DNA repair and recombination proteins [BR:cbri03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     134829857
  Check point factors
   HRAD17(Rad24)-RFC complex
    134829857
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_22 AAA_14 AAA_24 AAA_16 Rad17 Mg_chelatase AAA_11 AAA_5 AAA_19 RuvB_N AAA_assoc_2 nSTAND3 DNAX_ATPase_lid AAA_18 Viral_helicase1 MeaB NTPase_1 AAA_28 DUF2247 ABC_tran Gp44_lid IstB_IS21 AAA_3 AAA_23 ATPase_2 MCM RNA_helicase AAA_30 MipZ AAA_25 AAA_2 SRP54 MnmE_helical CbiA
Other DBs
NCBI-GeneID: 134829857
NCBI-ProteinID: XP_063699210
LinkDB
Position
2:42473086..42474356
AA seq 338 aa
MPDNEMDTTPNVGTSAERKSNLPWVEKYRPTTFDEIVGNVETVQRLSVFAKQGNAPNIII
AGPPGVGKTTTILCLARILLGDCFDEAVLEMNASNERGIDVVRNKIKSFAQQKITLPKGR
HKIIILDEADSMTEQAQQALRRTMEIYSNTTRFALACNSSEKIIEPIQSRCAMLRYTKLS
DAQLLAKCIEVCQKENVKYDESGLEAIVFTAQGDMRQALNNLQSTHNGFGFVNSENVFKV
CDEPHPLIVQEMLEHCVKGDIHKAYKIMAKLFQLGYAAEDIIGNVLRVCKRMKMPEKLKL
IYIRDIGEAHMKIIDGLNSLLQMTGLLAKLCEASYEYS
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgccggataatgaaatggatacaacccctaacgttgggacatctgcggaaagaaaaagt
aatcttccatgggttgagaaatatcgaccaacaacatttgatgaaattgtcggcaatgtc
gaaacagttcaacgcctttcagtattcgcaaaacagggaaatgctccaaatattataatt
gctggtcctccgggtgttggaaaaacaacaacaatcctttgtctcgcacgtatcttgctt
ggcgattgtttcgatgaagctgttttggaaatgaatgcctcaaatgagcgcggaatagat
gtcgttcgtaacaagatcaagagttttgcccaacagaagattacccttcctaaaggtcga
cacaagattatcattctcgatgaagctgattcgatgacagaacaagcccaacaagcactt
cgtcgaacaatggaaatttacagcaacacgactcgttttgctcttgcctgtaattcatcc
gagaaaattatcgagccaattcaatcgcgttgtgcgatgttacgttacacaaaactatca
gatgcacaattgctcgcgaaatgtatcgaagtttgtcaaaaagaaaatgtcaagtacgat
gaaagcggattggaagccattgtatttacagctcaaggcgatatgagacaagcattgaac
aatcttcaatccacacacaatggctttggatttgtcaacagcgaaaatgttttcaaagtt
tgtgatgagcctcatccattaattgtacaagaaatgttggaacattgcgtaaaaggagac
attcataaggcgtacaagatcatggcgaaattatttcaacttggatatgcagcggaagat
atcatcggaaacgttcttcgtgtttgcaaacgcatgaaaatgcctgaaaaattgaaactc
atttacattcgggatattggagaagcgcacatgaaaatcatcgacggattgaattcactc
ctgcaaatgacaggacttcttgcaaagctgtgcgaagcttcttacgaatattcataa

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