KEGG   Culicoides brevitarsis: 134829919
Entry
134829919         CDS       T10947                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
cbri  Culicoides brevitarsis
Pathway
cbri03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cbri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    134829919
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cbri03041]
    134829919
   04121 Ubiquitin system [BR:cbri04121]
    134829919
Spliceosome [BR:cbri03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    134829919
Ubiquitin system [BR:cbri04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    134829919
SSDB
Motif
Pfam: SART-1 HIND
Other DBs
NCBI-GeneID: 134829919
NCBI-ProteinID: XP_063699284
LinkDB
Position
2:12401854..12404630
AA seq 806 aa
MGSDRKKHKKESKKHRHRSRSESEEDEEYRRDRAERKKVKKSKEKKRHRRSRSRSVEEVN
SDSSDCVEVPVLPPPAPTISSSRRRASPEVEVPPPPRRSRSPVKRKQRTPSPPPITQKRR
KSKSMSPIPDGGAGDCLSIEETNKLRAKLGLKPLDVTPAEKKPSPEKDAKPKKDGEPELK
VLKDDWGEFVHKPAENFAEKNNVAKIRERLKERREKRALEARITSLKTLGESDGEDDAKN
WVTKQRDTVKLKQEAEKRAKMLEEMDEEFEAPVLVDGELRRRKKKAYTNRDLQGLKVEHD
ISSFTEGKSVILTLKDKGVLDEEEDDTLVNVNFVDDERYKKSVENKKQNPHRYGYDVYEE
QVDEFGQPIERSLLKKYDEEVGEVKKSSFVIGESIEEERKRKRKLQELKAKLENKALVSL
DTIPLTLASEYYNEEELTKFKKPKKKVKKVRQKLKADDLLAMAADHDSKKDFGSRRNRHL
DTDDTEIPDIKPDDIKVEVDDDLEKVLSKARRLKQKEAIIQKPLPLEQLAVKEEIKQEDD
DEDVSNGLTFNSNIILNETAEFCRTLGDIPTYGLAGNRDTDTAEIMDFDNIDQDIDENTK
RHNTWNTVDPDEEMPDVIDITDDVKHVAEAAILDEEPDVASGVGAALKLAMSKGYLEKEE
SNRPSNAKFAHLQAKNYSIDDKAYGEDDKYSRRDRYSGPLMDFKEKEGFKPNVKLEYIDD
NGHILNAKEAFRYLSHKFHGKGPGKNKVEKRLKKAEQEGLMMKMSSTDTPLGTLSMLQQK
QKETHSAYVVLSGNKAGTSTSFVKEK
NT seq 2421 nt   +upstreamnt  +downstreamnt
atgggctccgataggaaaaaacataaaaaggagtctaagaagcacagacaccgttcaaga
tccgaatccgaggaagatgaagaatatcgtcgggatcgcgccgaaaggaaaaaagtcaag
aagagcaaggaaaagaaacgtcaccgtcgcagcagatcgcgatccgtagaggaagtcaat
agtgatagctccgattgcgttgaagttcccgttttgccacccccagctccaacaatttca
agttctcgtcgtcgtgccagtcccgaagttgaagttcctccgccgcctcgtcgatctcgt
tcgcctgttaaacgaaagcaacgtactccaagcccgccgccaatcacccagaaacgtcgc
aagagcaaatccatgtctccgattcccgatggcggcgcaggcgattgtctcagcatcgaa
gaaacgaacaaattgcgcgcgaaactcggattgaaaccgcttgacgtgacgccagcggaa
aagaaaccaagtcccgaaaaagatgcaaagcccaaaaaggacggcgaaccagaactgaaa
gttttgaaggacgattggggcgaattcgtgcataaaccagcagaaaacttcgccgagaag
aataacgtggcgaaaattcgtgaacgtctcaaggaaagacgcgaaaaacgagctttagag
gcacgaattacgtcgttaaaaacattgggcgagtccgatggggaagacgacgcgaaaaat
tgggtgacgaaacaacgtgacacggtgaaattgaagcaagaagccgaaaaacgggcaaaa
atgctcgaagaaatggacgaggaattcgaagcgccggtcttggtcgacggtgaattacgt
cgcaggaagaaaaaagcttacaccaaccgagatttgcaaggattgaaggtcgaacatgac
atcagcagcttcaccgaaggcaaatccgtgattttaacgctcaaggacaaaggcgttttg
gatgaagaggaagacgatactttggtcaatgtgaatttcgttgacgacgaaagatacaaa
aaaagtgtcgaaaataagaaacaaaacccgcatcgatacggctatgacgtgtacgaggag
caagttgacgagttcggacaaccgattgaacgtagtttgttgaaaaaatacgacgaagag
gtcggagaagtgaaaaaatcgagctttgtgattggcgaaagtatcgaagaagaacgaaaa
cgcaagagaaagttgcaagaattaaaggcgaagctcgaaaacaaggctcttgtctcactt
gacacgattcctctgaccctcgcttccgagtattacaacgaagaagagttaaccaaattc
aaaaaacccaaaaagaaggtcaaaaaagtccgtcaaaagttaaaagctgacgatttactc
gccatggcggcagatcacgactccaaaaaggactttggctcccgtcgaaatcgccatctc
gacaccgatgacacggaaatccccgacattaagccagacgacatcaaagttgaagtcgac
gatgacttggaaaaagttttatccaaagcaaggcgtctcaaacagaaggaagcgatcatc
cagaaacccctcccgttggaacaactggctgtcaaagaggaaattaagcaagaagacgac
gacgaagacgtttccaacggcttaacgttcaattcgaacatcatcctgaacgaaaccgct
gaattttgtcgaactctcggcgatattccaacttatggcttggcaggaaatcgcgatacc
gacacagcagaaatcatggactttgataatatcgatcaggatatcgacgagaacacaaaa
cgacataatacctggaacaccgtcgatccggacgaggaaatgcccgatgtgattgatatc
acggacgacgtaaagcatgtagcggaagcggcgattctcgatgaagagcctgatgtcgcg
agcggcgttggagcagcacttaaactcgcaatgtcgaagggttatttggagaaggaagag
tcaaatcgaccgagtaatgcgaaatttgcgcatttacaagccaaaaactactccattgat
gataaggcgtatggcgaggatgacaaatatagtcgtcgtgatcgatattcgggaccgctg
atggatttcaaagagaaagagggattcaagccaaacgtgaaactggaatatattgacgat
aatggacacattttgaatgcgaaagaggcatttaggtatttgtcacacaagttccatggc
aagggaccaggcaagaataaggttgagaagcgtctcaagaaggcggaacaggaagggttg
atgatgaaaatgagttcaactgacacgccattgggaacgctcagtatgctgcaacaaaag
caaaaagagacccacagtgcttacgtagtgttaagtggaaataaggctggcacgagtact
agtttcgttaaggaaaagtag

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