Culicoides brevitarsis: 134830107
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Entry
134830107 CDS
T10947
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
cbri Culicoides brevitarsis
Pathway
cbri04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134830107
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
Laminin_B
EGF_LMN_ATRN
JAG1-like_EGF2
Rota_NSP4
Motif
Other DBs
NCBI-GeneID:
134830107
NCBI-ProteinID:
XP_063699548
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All DBs
Position
2:complement(29981762..29992846)
Genome browser
AA seq
1617 aa
AA seq
DB search
MSTKLTWKSVVFLFVVAAATSSSDNEHYQPPLECNDPYGRPQRCVPEFENAAYKVHIGAT
NTCGEDGPTDFCVQTGYANRKSCEQCHQGDHTSQYLTDIHDPLNPTWWQSETMFEGIQSP
NQVNLTLHLGKSFDITYIRLVFYSPRPESFAIYKRVTENGPWIPYQYYSATCRDTYGLPD
TVAIKQGEDEQRALCTSEYSDISPLRDGNIAFATLEGRPSAYNFDHSPELQQWVTATDIL
ISLDRLNTFGDEVFGDAAVLKSYFYAIADIAVGARCKCNGHASKCVESTGFNGERTRVCE
CKHFTDGPDCEKCLPFYNDVPWGRGTMKNVHECKPCNCNGFSQKCYFDRALYNLTGHGGH
CIDCAANRDGPNCERCKENFYMRDDGYCIHCGCDPVGSRSLQCNSEGKCQCKPGVTGEKC
DRCESDFYNFGPHGCQACNCDTRGSLDNVPACHPDTGICFCKENVEGRHCRECKPGFFNL
DLDNKFGCTPCFCYGHTSECQSAPGYSIVSTTSNFNKHQEKWMAVDRDNHPVDLKYNRYS
QNIGVSAHGNNFIYFLAPERFLGDQRASYNRVLKFRLQLVGQQRPDTSPYDVILEGAGTK
ISLPIFSQDNKLPDQQIREYSFRLHENSEYSWQPSQSARGFMQILSNLTAIKIRATYSHE
GEGFIDEVELQTAHRGAAGRPASWIEQCTCPEGYLGQFCESCAPGYRHSPPGGPFMPCIP
CDCNKHASICDSESGRCICQHNTAGDNCGQCAKGYYGNALSGTPFDCKRCPCPDNGACLE
MPGGDVICLECPVGYVGSRCELCSDGYYGDPTGVSGKVQVCQACDCNGNVDPNAVGNCNR
TTGECLKCIHNTAGPHCGQCLPGHFGDPFASPHGQCEQCRCYRRGTEQTEDGVDMCDQLS
GNCNCKPNVIGRDCNECKNGYWNIASGNGCESCNCDPVGSFNSSCDIYTGQCYCKPGVTG
DKCDQCQAYQYGFSTEGCKQCDCDAIGSKGRQCDQNGQCPCNDNVEGLRCDRCKENTYDR
EKGCVDCPDCYNLVQDAVNEHREKLDALKRTLQDIANNPTVSDDEEFESKLKATQEKLDI
LLDDAKSAAGGGDLTLVERVNELHDKLSNIRDLLDSADQLQQTANGETDKANSIAVQLEK
TILQANKELTDALEVLQTDGHQALQRAKERSASLDNQSKEISEISRQARTYADKLEAEAE
TAKATAQEALDKATKAFEVAKNTNNLQQQINADIKQNISTELSQLTQKLETVKRITEDSL
EKANEVYDDALTLFANINSLSAPEIDTKQIKEDAKRLIEESDRILKELDEVVDSHDNLLK
EVAENIELAKILIARAEAQKAEAIEMLDDVKVSHTKALEAVERGSKTLKEANETYHILAE
FQNKIKQSSENARVALEQIGNIEKQIRDAEVLVDTAEQALDGAKNNANDARKNAQEAQEK
YAEQASMDAENIRRKANETKVAARLLRSEADNLNARVASTEIRMSNLENAAKKDDELTKE
AKDKVGQANADAAEAQKQVEKALREVNAITEELASLRNIDVEDLNRLEQQLAAAEAELQR
ANLDARLESLTELKNNQNSMIKNYKDDIRMLEAEVTNIRLIAESLPDGCFKRVRLEP
NT seq
4854 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccaaattaacgtggaagagtgtcgtgttcctatttgtcgtcgctgctgccaca
agttcatcggataatgagcattatcagccaccgctcgagtgtaacgatccatatggtcgt
ccgcaacgttgcgtgcccgagttcgagaatgcagcgtacaaagtgcacatcggcgccacc
aatacatgtggcgaggacggtcccacggatttttgcgtgcaaacgggctacgcgaatcgc
aagagttgcgagcagtgccatcagggcgaccacacatcgcaatacctcacggatatccat
gatcccctgaatcccacatggtggcagtccgagacgatgttcgagggtatccaaagtccg
aatcaggtcaatttgacattacatttaggcaagtcatttgacatcacgtacattcggttg
gtcttctattcgccgcgtcccgaatcgtttgccatctacaagagagttaccgaaaatgga
ccatggataccatatcagtattatagtgcaacgtgccgtgatacctacggactaccagat
acggttgccattaagcagggcgaggatgagcaacgggctctttgcacgagcgagtacagt
gacatttcgccgttgcgcgatggaaatatcgcttttgccaccttggaaggacgtccttct
gcctacaattttgatcacagtcccgagttgcagcaatgggtaactgccactgacatcctc
atctcgttagatcgcctcaacacgttcggcgacgaagttttcggcgatgccgctgtcttg
aaatcctacttttacgccattgccgatatcgcggtgggtgctcgttgcaaatgcaatggt
cacgcatcgaaatgcgtcgaaagtacgggcttcaatggcgaacgaacgcgcgtttgcgag
tgcaagcactttaccgacggaccggactgcgaaaaatgtttacctttctacaatgacgtg
ccatggggacgcggaacaatgaaaaatgtacacgaatgtaaaccttgcaactgcaacggc
ttctcccaaaaatgctatttcgaccgtgctttgtacaatttgacgggccacggaggtcat
tgcatcgattgcgccgccaatcgtgacggtcccaattgcgaacgttgcaaggagaacttc
tacatgcgtgacgacggctattgcattcactgcggatgcgatcccgttggttcccgatca
cttcagtgcaattccgagggcaagtgtcaatgcaagccaggcgtgacgggcgaaaaatgc
gatcgttgcgaaagcgatttctacaatttcggtccgcacggatgtcaagcttgcaattgt
gacactcgtggatcactcgataacgtgcctgcctgtcatcccgacaccggaatttgtttc
tgcaaggagaacgtggagggacgtcattgtcgcgaatgcaaacccggcttcttcaacctc
gatttggacaataaatttggatgtacgccgtgtttctgttacggacacacctcggaatgt
caatcggcgccgggatattcgatcgtttcaaccacttccaacttcaataagcatcaggaa
aaatggatggcagtcgatcgtgacaatcatccagtcgatttgaaatacaatcgatacagc
cagaacatcggggtgagtgctcatggcaataatttcatctatttcctcgcaccggaacgt
ttcctcggcgatcaacgtgcctcctacaatcgcgttttgaaattccgcttgcaacttgtc
ggacaacagcgacctgacacatccccctatgacgtcatcttagaaggcgccggcacgaaa
atctccttgcccatcttttcgcaagacaacaaactgcccgatcagcaaatccgcgaatat
tccttccgtttgcacgaaaattccgaatattcgtggcaaccgagtcaatcggcgcgtggt
ttcatgcaaattttgagcaatttgacggcaatcaaaattcgtgccacgtattcgcacgaa
ggcgaaggtttcatcgatgaagttgagttgcaaacggcgcatcgtggcgctgcgggacgt
cctgcctcgtggatcgagcaatgtacctgtcccgaaggttatttgggacaattttgcgag
tcatgcgctcccgggtatcgtcatagtcctccaggaggtccttttatgccttgcatcccg
tgcgattgtaacaaacatgcgagtatttgcgattcggagagtgggcggtgcatctgtcag
cataacacggcgggcgacaattgcggacaatgtgcgaagggatattacggaaatgcattg
agtggaacgccgtttgattgtaagagatgtccttgtcccgataatggagcttgtttggaa
atgccgggaggtgacgttatttgtctcgaatgtcctgttggatatgttggttctcgttgc
gaactttgctctgatggttattatggtgatccaactggcgtctctggaaaagttcaagtt
tgtcaggcatgcgattgtaatggaaatgttgatccaaatgctgttggtaactgtaatcgt
acgacaggagagtgcttgaagtgtattcacaacactgcaggacctcattgcggacaatgt
ttgccaggtcactttggagatccatttgcctctccccacggtcaatgcgagcaatgcaga
tgttatcgtcgtggcacggaacaaactgaagatggagttgacatgtgcgatcaattgtct
ggcaattgtaactgcaaacccaacgtaattggtcgcgattgtaacgaatgcaagaacggc
tattggaacattgcttccggaaatggttgcgaaagttgtaattgcgatccagttggttcc
ttcaactcgtcgtgcgacatctacactgggcaatgttattgcaaacctggcgtcacgggc
gacaaatgcgaccaatgtcaagcgtaccaatacggattctcgacggagggctgcaaacaa
tgcgattgcgatgccatcggctcaaagggacgtcaatgcgaccaaaacgggcaatgtcca
tgtaacgataatgtcgaaggcttacgttgcgatcggtgcaaagagaatacttatgatcgt
gaaaagggatgcgttgattgtccagattgctataatttggttcaagatgccgtaaatgaa
catcgcgagaaattagacgctcttaaacgaacgttgcaagatattgccaataatccgaca
gtcagcgacgacgaggaattcgagtcgaaattgaaggcaacccaagaaaaactcgatatt
ttgttggatgacgcgaaatcagcagctggcggtggcgatttgactctcgttgaacgtgtc
aatgagcttcatgataaattatcgaacatccgtgacttgttggatagcgcggatcaactt
caacaaaccgccaacggagaaacggacaaagctaattcaatcgctgttcagctggagaag
actattttgcaagccaacaaggaattaacggacgctttggaagttcttcaaacagatggg
catcaagcacttcaacgcgcaaaggaacgttccgcctctttggacaaccaatccaaggaa
attagcgagatttcgcgtcaagcacgtacctatgccgataaacttgaagcggaagccgaa
acagcaaaggcaactgcccaagaagccctcgacaaggcaacaaaagccttcgaagtcgcc
aaaaacacgaataacttgcaacaacaaatcaacgccgacatcaagcaaaatatctcaacc
gagttgagtcaattgacacaaaaattggaaactgtcaaacgcatcaccgaagactccctg
gagaaggcaaatgaagtttacgacgatgccctgaccttgttcgctaacatcaactcgtta
tcggctccggaaatcgacacgaaacaaattaaggaagacgcgaagcgattaattgaagaa
agtgaccgaattctgaaggaattggacgaagttgtggactcgcatgacaatttgctgaag
gaagttgcggaaaatatcgaattggcgaagattttgatcgcaagagcggaagcacaaaaa
gcagaagcaattgagatgttagatgatgtcaaagtgtcacatacgaaggctcttgaggca
gttgaacgtggaagcaagactttgaaggaagcgaacgaaacttatcacattcttgctgaa
ttccaaaataagattaaacaatcatccgaaaatgcgcgcgttgcattggaacaaattgga
aacatcgagaaacaaatcagagatgctgaagttttggtcgatactgctgaacaagcactt
gatggagcgaagaataatgccaacgatgctcgtaaaaatgctcaagaggcacaagagaaa
tatgctgaacaagcttcaatggacgccgaaaacattcgtcgcaaggcaaacgaaacgaaa
gttgccgcgcgtctccttcgcagtgaagctgataacttgaatgcacgtgtcgcctccacg
gagatccgcatgagcaacttggaaaatgccgcgaaaaaagacgacgaactcacgaaggaa
gccaaggacaaagttggtcaagcgaatgccgatgcagcagaggcccaaaagcaagttgag
aaggctttgcgtgaagttaacgccatcaccgaagaacttgccagcttacgaaatatcgat
gttgaggatttgaatcgattagaacaacaactcgccgctgccgaagccgaactccaacgt
gccaacttggatgcccgcttggaatccctcacggagctcaagaacaatcaaaattcgatg
atcaaaaactacaaagacgacatccggatgttggaagctgaggtcacgaatattcgactg
attgccgagtcactgcccgatggatgcttcaaacgtgtgcgacttgaaccctaa
DBGET
integrated database retrieval system