Culicoides brevitarsis: 134830288
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Entry
134830288 CDS
T10947
Name
(RefSeq) septin-interacting protein 1-like
KO
K13103
tuftelin-interacting protein 11
Organism
cbri Culicoides brevitarsis
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbri03041
]
134830288
Spliceosome [BR:
cbri03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
134830288
Other components
Complex C specific factors
134830288
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Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
PGA2
Motif
Other DBs
NCBI-GeneID:
134830288
NCBI-ProteinID:
XP_063699786
LinkDB
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Position
2:17873692..17876264
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AA seq
801 aa
AA seq
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MSDEEYERFEITDYDLDNEFNPNRNRRRPTKNQAIYGIWADNSGDSDDSGPELGGRRKKG
FKDYSKPLNFVAGGVQQAGKKPPSLVPNQIKGKKDDESGDEDDGEEEREQATSESEQEEM
TMNHMAGFRTRNFRPSNMPKGMGDWEAHTKGIGSKLLQKMGYEPGKGLGKELQGINAPVQ
AFLRKGRGAIGAYGPEKAARIADQKQVGKKKLDDDEKEALEFKEKMSQWKGKGNDKKRKV
RYVYRTVEEVIAKGQKSSYGILDQKMSKVTVIDMTGPEKRVLSGYHALGQAKHEDDIERK
ETQNFALPELMHNLNLLVDMSEQEIIAHDRRQRAAETRIAELEQEKENLHKIVELEKDYL
TTLESALELVEKIVKPTDDLTLEDAEKVFIQLKVNYPTEYKEFQLQDLVPGVIAPLVNAS
LRHWEPFENPTEPISLIKKWMSLLDIKPHDSKDIFDPYSVLIWSGIIPRIRAASANWNPR
QPHEMASLLDAWAPLLPEWILDNILDQMVLAKLTFSVNDWNPLTDHVPIHTWIHPWVQLL
GTKMQTTVYPVIRDKLSKALKAWSPEDRSARLMINPWKGVFAADDMEVFLAKNIVPKLEL
RLRELQINPLQQEIEIFNQVWEWHEILSLQVMVHLFDRNFFPNWMQILVVWLNQNPNFNE
VSRWYQGWKSQFNDAFLQHPQVKDHFRRALELMSRACGVTAPDTDNVPTPPPAPIIGDSL
PSLMDIRVGAPPQLEFKEIVSQRCAERGIIFAPMPGRRENGKQVYRVGKLFCYIDRSVCV
VSQDGGNQWNPMSVQQMMEIA
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgaggaatatgagagatttgagatcaccgactacgatttggacaacgaattt
aacccaaatcgcaatcgcaggagaccaacaaagaaccaagcgatttacggtatttgggct
gataattctggcgattccgatgattctggacctgaattgggcgggcgtcgtaaaaaaggc
ttcaaagattattcaaaacctttgaatttcgtcgccggaggggttcaacaagccggaaaa
aagcctccgtcactcgtgccgaaccaaataaaaggcaaaaaagacgatgaaagcggagat
gaggacgatggcgaagaagaacgtgaacaagcaacgagcgaatctgaacaagaggaaatg
acgatgaaccatatggcgggttttcgtacgcgaaacttccgcccgagcaacatgcccaaa
ggaatgggcgactgggaggcccatacgaaaggcattggcagcaaattgttgcaaaaaatg
ggttacgagccgggaaaaggtctcggaaaagagttgcaaggcataaatgcgcccgttcaa
gctttcttacgtaaaggtcgaggcgccatcggagcttatgggccggaaaaagcagctcga
atcgccgatcaaaagcaagttggcaagaaaaaacttgacgacgatgaaaaggaagcactt
gaattcaaggaaaaaatgtcacaatggaaaggcaagggtaacgacaagaaacgcaaagta
cgttatgtctacagaaccgtcgaagaagtcatcgccaagggtcaaaaatcgagttacggc
attctggatcaaaaaatgtcgaaagtaacggtaattgacatgacgggacccgaaaaaaga
gttttatccgggtatcatgcgcttggacaggcaaaacacgaagacgatatcgagcgaaag
gaaacgcaaaatttcgccttgcccgagctgatgcacaatttgaacttgttggtagacatg
agtgaacaggaaattatcgcacacgatcgacgacaacgcgctgccgagacacgaatcgcc
gaactggaacaagaaaaggaaaatttacacaaaattgtcgagttagagaaagattacctc
acaacactcgagtctgcgttggaattagtcgaaaaaattgtcaaaccaacggatgatttg
acactcgaagatgcggaaaaagtgtttattcaactaaaagtcaactaccccacggaatat
aaggagtttcaattgcaagatttggtgccaggtgtcatcgcgcctctcgtaaatgcgtcg
ttgcgacattgggaaccttttgaaaatccaaccgaaccaatttcgttgatcaaaaagtgg
atgtctttgttagatatcaagccgcatgactcaaaagacatcttcgatccgtattccgta
cttatttggtccggcattatcccgagaattcgtgctgcttcggctaattggaatccccga
caaccgcatgagatggcgtcgttacttgatgcttgggcgcccctgttgcccgaatggatt
ctcgacaacattctcgatcaaatggttttggcgaaactcacgttcagcgtaaacgattgg
aatccgttgacggatcacgtgccaattcacacgtggattcatccgtgggttcaattgttg
ggcacgaaaatgcaaacgaccgtttatccggtgattcgtgacaaattatcgaaagctctc
aaggcatggtcgcccgaagatcgatccgctcgtttaatgatcaacccgtggaaaggcgtt
ttcgcagctgacgacatggaagtctttctcgccaaaaatatcgtcccaaagctggagctg
cgacttcgtgagttgcaaattaatccgcttcaacaggaaattgaaattttcaatcaagtt
tgggaatggcatgaaatcctctcgttacaagtgatggtccatttattcgatcggaacttt
ttccccaactggatgcaaattctcgttgtttggctcaaccaaaatcccaactttaatgaa
gtgtcgcgatggtatcaaggatggaaatcgcaatttaatgacgcctttctgcaacatccg
caagttaaggatcattttcgacgtgcacttgaacttatgtcacgtgcatgtggcgtcaca
gctccggatacagataacgttccaacgccaccgcccgccccaattatcggcgatagttta
ccatcactcatggatattcgggtgggagcgccgcctcagctggaattcaaggaaattgtg
tcgcaacgatgcgcggaacggggaattatttttgcgccgatgcccggcaggagggaaaat
gggaagcaagtttatcgtgtcgggaagttgttttgctatatcgacaggtctgtgtgcgtt
gttagtcaggacggaggaaatcagtggaatccgatgtcggtgcaacagatgatggaaatt
gcgtag
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