Culicoides brevitarsis: 134830403
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Entry
134830403 CDS
T10947
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
cbri Culicoides brevitarsis
Pathway
cbri04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134830403
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cbri01009
]
134830403
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbri04131
]
134830403
03029 Mitochondrial biogenesis [BR:
cbri03029
]
134830403
Protein phosphatases and associated proteins [BR:
cbri01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134830403
Membrane trafficking [BR:
cbri04131
]
Autophagy
Autophagosome formation proteins
ULK complex
134830403
Mitochondrial biogenesis [BR:
cbri03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
134830403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG17_like
ATG11
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
134830403
NCBI-ProteinID:
XP_063699941
LinkDB
All DBs
Position
2:12250520..12266834
Genome browser
AA seq
1264 aa
AA seq
DB search
MLYVFHVDSGRMLTFDMNIAVESVQYLKGIIERHHAIPAKDQVLLVSGGETLQNNARVGK
YSAGTDTNPIFLFCKTLTECKNIPPWPSIDSEIDLKQQVDKCLELPATYNTVVTRAQLAQ
QVHEMAKEEFRICENLVMEQHLQQQGWCAVVANLEDITVDFHERCDVFFRGFDEHLDKRN
EHLDYLKNFNDDLSKLAKIPILPGLLHCAENKRFSAFDEVYDDADFNKSNNSDKAPSEQA
TEQSAIEGTSSTGSNNEKSVSSSSTKKEEGKGMTLLQWISETENQRSLRCMAENCAKELE
RFNEKNRDDLKSEIKLAVDAASREDMKEIKGLEDRLQGLERLMFDAKKIVQEQSELSTAF
HQNQMRAANIGDTSILPDLCASHKGQLMVMLQNHRRLYDIRRRCSKAKDELGANLFTRLR
FISNIESRMWHIDSLLLFYHNCLKRLQKHLNIIEQIHQAPTVYVTAVNEVVRRKEFSDAF
LSWASNLSCHLQTIYNDELGRRQDFAAIFDGHFLSSLFPGMNDMPPPFATEAPVPFDSSL
PNLTRNDISELKNQLPEYSAKSSFLQEMDNVIQFFTNSRSQLKIFTSEESKVIVQGDSQM
LKRAGLHSHLKEYEKGFESETDTEEFEKVGQSPIDRRSGTVNVQTGSNAAITVPPTINKP
EFRSVTTSVMEVPLQSVETMTEESYESTQAEITRLKNLIDEIKTFSSNSIAAVRRELEQA
KAETNTFRSQMSSDCKTLVQTWHALEQEMKNRERELVQRLTVDFELEMNDIRKTLSTKQD
EIQMLANEKRALEEARMDEITHQENEKSVLREAVGKLNEEIEQLKTELDKAIATKAEAIK
EIRDTHKTEMDCVRARLKLMASVDRSPSDTSLEKIERPDMIDIVNHEMFMAQLREDLDKE
REKAVQEAVEAERARIQTESGGSNNSTNDTYKRIIEEKESQMDLMREHAETLRRENMKMR
DRIQSLADSDIDGSQMSILRNRLDKMLEEKEKIENELRKVKQKLGKMQSDTSKRTATIES
CGVGDLVTIVWNPTHEQFTIVQDSQTLYFLHAESYADLGLAVPVPPATMPAVLHTFGIVT
KKDYCRARKDENRYKVSKGSQFYVIKAKPRVPFNRRDSNTTSTSSSQYRLSAQLIDSFAQ
TDLEPLFEQNDMIDSGVSEQQKSVYKDRTGSVDTAEEHTDEIDSSSAGGAVSRAVDVLDE
TDGTLVQLMIESGEISAAQVQSTTTIAGGSNSSSRKGLDDDDLMDSLSDGEFRSLENTKH
EEEL
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atgttgtatgtttttcacgtggacagcggtcgcatgttgacctttgatatgaacattgcg
gttgaaagtgtgcagtacttgaagggcatcatcgaacgacatcatgcgattccagcgaaa
gatcaagttttgctcgtgagtggcggagagactttacaaaataatgcccgtgtggggaaa
tattccgcgggaacagacacaaatccaattttcctcttttgtaagacgctaacagaatgc
aagaacatcccgccatggcccagcatagattcagaaatcgatttgaaacaacaagtcgac
aaatgcctagagttacctgccacatacaacaccgtggtaactcgtgcacaattggcacaa
caagtgcacgaaatggcaaaagaagagtttcggatctgcgagaatctcgtgatggagcaa
catttgcagcagcagggatggtgcgcggtcgttgcgaatttggaagacatcacggtggat
tttcacgaacgatgtgacgtgttttttcggggatttgacgagcacttagacaagagaaat
gaacatttggattatcttaaaaatttcaacgacgacttatccaaactagcgaaaattcca
attctgccgggattgttgcactgtgcggaaaacaagcgttttagtgcgtttgacgaagtt
tatgacgatgcggactttaacaagtcgaataattcggataaagctccgtcggaacaagca
acggaacaaagcgccatcgagggaacaagtagcacgggcagcaataatgagaaaagtgtg
tcgtcatcgtcgacaaaaaaggaagagggcaagggaatgactttgttgcaatggatatcg
gagacggaaaatcaaagatcacttcgttgcatggcggaaaattgtgccaaagagttggag
cggttcaatgagaagaatcgcgatgatctgaagtctgaaattaagcttgcggttgatgca
gcttcaagggaggacatgaaagaaataaaaggtctcgaagatcgtttacaaggtctcgag
cgcctcatgttcgacgcgaagaaaatcgtgcaagagcaaagtgagttgtcgacggcattt
catcagaatcagatgcgtgccgcaaacatcggtgatacatccattctgccagatttgtgt
gcctcccataagggtcaactaatggtgatgctgcaaaatcatcgacgcctctacgacatc
cggcgacgttgtagcaaggcgaaagacgagctcggtgccaatttatttacgcgcctccgg
ttcatcagcaacatcgagagtcgcatgtggcatattgacagcttgctgctgttctaccac
aattgcttgaaacgcttgcaaaagcatctgaacatcatcgaacaaatacatcaggcgcca
acggtgtatgtgacggcagtcaatgaagttgtgcgtcgcaaggaattttcagatgctttt
ttatcgtgggcttcgaatctctcatgccatctccaaacaatctacaacgacgagcttggg
cgtcgacaggattttgcggcgatctttgacggtcatttcttgagcagcttgtttccggga
atgaacgacatgccgcctccattcgccactgaagctccagttccgttcgattctagtctc
ccaaatttaactagaaatgacattagtgagctaaaaaaccaacttcccgaatattcggca
aaatccagtttcttacaagaaatggacaatgtgatacaattttttacaaacagtcgaagc
caacttaaaatatttacctcagaggagagtaaagtgatcgttcaaggtgattcgcaaatg
ttgaaacgagcaggacttcattcgcatcttaaggaatatgaaaagggttttgagtctgaa
actgacacagaagagttcgaaaaagtaggtcaaagtcctattgatcgacgttctgggaca
gttaacgttcaaacgggatccaatgccgccattactgtgccaccaactattaataaacca
gaatttcgcagtgtaacgacctccgtgatggaagttcctctgcaatctgtggagacaatg
acggaggaaagttacgaatcaactcaagccgaaatcactcgtctgaaaaacctgatcgat
gaaatcaaaactttctcgtccaattccatcgctgccgttcgtcgcgagctcgaacaagcc
aaagccgagaccaacacgttccgtagccaaatgtcaagcgattgcaagacgctcgtgcaa
acgtggcacgccttggagcaagaaatgaaaaatcgcgagcgcgaactcgttcaacgtctc
acggtcgacttcgagctcgaaatgaacgacattcgcaaaacgctgagcacgaagcaagac
gaaatccagatgttggcgaacgaaaagcgcgccttggaggaagctcgcatggacgaaatt
acgcatcaggagaacgaaaaaagtgtgttacgtgaagcggttggcaaattaaacgaggaa
atcgagcaattaaagactgaattggataaggcgattgcaacgaaggcggaagcgatcaag
gagatccgcgatacgcacaaaacggaaatggattgtgtgcgggcacgtctgaagctcatg
gcaagcgtcgatcgatcgccaagcgacacgagtttggagaaaattgagcgtcccgacatg
attgacatcgtgaaccacgagatgtttatggcgcagttgcgcgaagatctcgacaaggaa
cgcgaaaaagcggtgcaagaagccgttgaagcagaacgcgcacgaattcagaccgaaagt
ggtggcagcaacaactccacgaacgacacttacaaacgaattatcgaagaaaaggaatcc
cagatggatttgatgcgagaacatgcggaaaccttgcgacgcgaaaacatgaaaatgcgc
gataggatccaatcgctcgcagattccgacatcgatggcagtcaaatgtccattttgcgg
aacaggctcgacaaaatgttggaagaaaaggaaaaaatcgagaatgaactgcgaaaagtg
aagcaaaaactcggaaaaatgcaaagtgacacgagtaaacgtacggcaacgatcgaaagt
tgcggcgttggcgatttggtgacaattgtctggaatccgacgcacgagcaattcacaatt
gtccaagattcgcaaactctgtactttttgcatgccgaaagttatgcggatttagggctt
gcagtgcccgttccgcctgccacgatgcctgctgtgctccatacttttggtatcgtcacg
aaaaaggactattgtcgggctcgcaaggacgaaaatcgctacaaagtctccaaaggcagt
caattctatgtgataaaagcaaaaccacgtgtcccatttaataggcgggactcaaatacg
acgtcgacaagttcgtcgcagtatcggttgtcggcgcaactcatcgattcgttcgcgcaa
acggatctcgagccgcttttcgagcaaaatgacatgattgactcgggcgtgagtgagcag
caaaagagcgtttacaaagatcgcaccggcagcgtcgataccgccgaggagcacaccgac
gaaattgacagtagcagtgctggaggcgctgtttcgcgtgctgttgacgtccttgatgag
acagacggcactttagtgcaactcatgatcgaaagtggcgaaattagtgcggcgcaagtc
caatcgacgacaactatcgctggcggcagcaacagcagcagtcgcaaaggcctggatgac
gacgacttgatggattccctgtcggacggtgaatttcgttcgctcgaaaatacaaaacac
gaagaagaattataa
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integrated database retrieval system
