Culicoides brevitarsis: 134830414
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Entry
134830414 CDS
T10947
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial isoform X1
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
cbri Culicoides brevitarsis
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
cbri03029
]
134830414
Enzymes [BR:
cbri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
134830414
Mitochondrial biogenesis [BR:
cbri03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
134830414
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
PPR_3
PPR_2
PPR
Motif
Other DBs
NCBI-GeneID:
134830414
NCBI-ProteinID:
XP_063699963
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All DBs
Position
2:complement(14306106..14313735)
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AA seq
1300 aa
AA seq
DB search
MYRVLNLRKPTQISVKVLSHRSINEYNANHDRYFSSFGSSSGLHNQNNAAGLLVGHGPVL
VPSASLSTVSKAYAILQKAKKWKKMKRKGNFTELLQVTPASTTETKTSVKNLKATQLHDF
IVSQGVTVDAATPKNPESLRKSEYQKIPIQMIDKSELLEDETVVFVDDKVRKMELSPETL
QEIIESYQTHKEEILPEDLEPAAFDYGDELALATPEIDTEMLLPEKVEKKKIKKKKEKVF
QSKFYRSPEEELQHKAKSLSDSLYAYVQVCISTGMVNRALKMVLNWYHSQQKGEMKKTIL
NIKLYNVLLSGLAQKGNLQRVKEIMTCLREDNVKCTPETYAYALECLGRQELTPEILEEL
KSVLEQASGDGIDPNMIMNKTKFTYDKREIVQSAIQAVLPDFQPSYTPPHFYYNNVLLDH
LNEQVIDVATKVPRDAKIDGSEVMEPKRGFTYDELMAFANEQLEIEMAGYVKIKNIAKDS
DAVTPQVEEYRAKWDELNQMWREKLTEGIKRDFTSIKASMHSQNGRHMNLFPYLKTLDVA
QFTEILMREVHRLSEGSESFSAPLVTLYHNLGKKIQTLYQVEQKKRNGVLNKMRDTYENY
CEILADGQSSDNPRQLWQRIVHQSRHEGPSLDIVEKSWPQNVRLEVGKFFYNILMRDLKL
DVNCLRKNVTTKNYLPAFYTIYRYHGYHLVQEIKPNPVLVKLLRGSMQDTLIMDANMVPM
VSPPQPWSSQNHGGYLLMKSDFLRLQTQAVQQLQRMDETKEENLYPAIDSINQLQSVPWK
VNEDILDVILEVFKNGGSDKLNVPPPPSTLAPPPDLDKSDATKEEKIQHFKDKMMFKRRQ
AEMYSLWCDALYRLSLANHFRKKVFWLPHNLDFRGRAYSIPPHLNHLGSDLARCLLVFHQ
KKPLGPDGFAWLKLHCINLTGLKKRDSVQERLLFAEEIMDEILDSADNPLNGRMWWTKSD
EPWQTLSACQEIAKVLRSGDPENYLSSYPIHQDGSCNGLQHYAALGRDSIGAYSVNLAPC
DVPQDVYSAVAALVEKMRAQEAATKPIAKVLEGFIRRKVVKQTVMTTVYGVTRFGARLQI
AKRLKEIDDFPQEHVWEASNYLTTKTLESLREMFTSAKEIQDWFTDCAKHISTTKAENIE
WVTPLGLPVVQPYTRSKKPTKDKQSMDIYEKPNTMKQKNAFPPNFIHSLDSSHMMLTSMH
CERAGLTFISVHDCFWTHACNVPTMNKITREQFVALHSQPILEELSKFMIQKYSYNESEF
AHNGSKEDIAKTKMNLSLKQVPKKGDFDLTNVLKSVYFFS
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgcgtcctaaatctgcggaaaccgacacaaatcagtgttaaagtgttgtcacat
cgcagcatcaacgagtacaacgccaatcacgacagatatttctcgagctttggttcctct
tcgggtttacataatcaaaacaatgcggctggattgttggtagggcatggacctgttctt
gtgccatcggcgtcactttcgaccgtcagcaaggcctatgccatcctgcaaaaagccaaa
aaatggaaaaaaatgaaacgaaagggaaatttcacagaattacttcaagtgacacccgca
tcaacgaccgagacaaaaacctccgtgaagaatctcaaagcgacccaattgcacgatttt
atcgtatcgcaaggggtgacagtcgatgctgcaacgccaaaaaatcccgaatccctcaga
aaaagtgaataccaaaaaattcccatccaaatgatcgacaaatcggagcttttggaagat
gaaactgtcgtttttgtcgatgacaaagtgaggaaaatggagttgtcgccggaaacgttg
caggaaattatcgagtcgtatcaaacgcataaagaggaaattttgccggaggatttggaa
ccagctgcgttcgattatggggatgaacttgccttggcaacgccagaaatcgacacggaa
atgctgctgccggagaaagtagagaagaaaaaaattaagaagaagaaggaaaaagttttt
cagtcgaaattctatcgatcgccggaagaagagttgcaacacaaagccaaatcgctgagt
gatagcctttatgcgtatgtgcaagtttgtatttccacgggaatggttaacagagcgctg
aaaatggtgctgaattggtatcattcgcagcaaaaaggcgagatgaagaaaactattctt
aatattaagttgtataatgtgttgttgtcgggattagcgcaaaaaggaaatttgcaacgc
gtaaaagaaataatgacttgccttcgagaggacaacgtaaaatgcactcccgaaacatat
gcatatgccctcgaatgccttggtcgtcaagaactgactccagaaatcctggaagagctc
aaaagtgtccttgaacaagcctccggcgacggcatcgaccccaacatgatcatgaacaag
acgaaattcacctatgacaagcgcgaaattgtccaaagtgccattcaagcagtgcttccc
gacttccagccttcttatacgcctccacatttttactacaacaacgttttgttggatcat
ctgaacgaacaagtgattgatgttgccaccaaagtgcctcgtgatgcgaaaatcgacggt
tctgaagtcatggagcccaaacgaggctttacttatgacgaactgatggcatttgccaac
gaacaactcgaaatcgagatggctggttatgtaaaaatcaaaaatattgccaaagattct
gatgcggtgacgccccaagtggaggaatatcgcgccaaatgggacgaattgaaccaaatg
tggcgcgaaaaactcacggaaggcattaaacgggactttacgtcgattaaggcgtcgatg
cattcgcaaaatggacgacatatgaacctttttccgtatttgaagactttggatgtggcg
caattcacggaaattctgatgcgagaggtccacagactcagtgaaggctcggaaagtttc
agtgcgcctctcgtgacactttatcacaatttaggcaagaaaatccagactttatatcaa
gtcgaacagaaaaaacggaatggagtgttgaataaaatgcgagatacgtacgaaaattac
tgcgaaatcctcgctgacgggcaaagtagcgacaatccgcgtcaattatggcaacgaata
gtccatcagagtcgtcatgaaggtcccagtttggatattgtcgagaaatcgtggccacaa
aatgtccggttggaagtcggaaaattcttttacaacattttgatgcgcgatttgaagctc
gacgtgaattgtttgcggaaaaatgtgacgacgaaaaattatttaccggctttttatacg
atttatcggtatcatgggtaccatcttgtgcaggagattaagccgaatccagtattagtc
aagttgctgcgtggctcgatgcaggacacactgataatggatgcgaatatggtgccgatg
gtaagtccgccgcaaccctggtcttcgcaaaatcacggagggtatttgctgatgaaaagt
gattttttgcgattgcaaacgcaagcggtgcagcaattgcaacggatggacgagacgaag
gaggagaatttgtatccggcgatagactcgattaatcagctgcaaagtgttccgtggaaa
gttaatgaagatattctcgacgtaattttggaagtgttcaaaaatggcggaagtgataaa
ttaaatgtcccgcctcccccatcaactttagcacccccgcccgatctcgacaaatccgac
gccacaaaagaggaaaaaatccaacatttcaaagacaaaatgatgttcaagcgacgtcaa
gccgaaatgtacagtctttggtgtgatgccttataccgtttatccttagccaatcacttc
cgcaaaaaagttttttggcttccacacaacttggatttccgtgggcgagcgtattccatt
ccgccgcacttgaatcacttgggcagcgatctggcacgttgcctgcttgtctttcaccaa
aagaaacccttgggtcccgacgggttcgcgtggctcaaattgcactgcatcaacctgacg
ggcctcaagaaacgcgattcggtgcaggaacgcttgttgtttgccgaagaaataatggac
gagattctcgattcagctgataatccgctaaatgggcgcatgtggtggacaaaatccgac
gaaccgtggcaaacgttgtcggcatgtcaggaaattgcgaaagttcttcgtagcggtgac
ccggaaaattacctgagctcgtacccgattcatcaggatggctcgtgtaacggattgcag
cattacgctgccttgggacgtgactcaattggtgcttatagcgttaatttggcgccatgt
gatgttccgcaggacgtttacagtgccgttgctgccttagttgagaagatgcgagcacaa
gaagcagccacaaaacccattgccaaagtcctcgaaggctttattcggcgaaaagttgtc
aaacaaactgtcatgacgaccgtttatggcgtcacacggttcggcgcgcgccttcaaatt
gccaagcgactgaaggaaattgacgattttccgcaggaacacgtttgggaggcctcgaat
tacctcacgacaaaaacgctcgaaagtttgcgcgagatgtttacgtccgccaaggagatt
caagactggttcacggattgcgcgaagcacatttcgacgacaaaagcggaaaatatcgaa
tgggtgacgcctttagggcttccagtggtgcaaccgtacacgagaagcaaaaaacccaca
aaagacaaacaaagcatggatatttacgagaaaccgaacacgatgaagcagaaaaatgcc
tttccgccgaattttattcactctctggattcgagccacatgatgctgacgtcgatgcat
tgcgaacgagccggtcttacgttcatttcggtgcacgattgcttctggactcatgcttgt
aatgtcccaacgatgaataaaattactcgagagcaatttgtggctttacactcgcagcca
atccttgaagaactctcaaaattcatgattcagaagtacagctacaatgaaagtgaattc
gctcacaacggatcaaaagaagacattgccaaaacgaagatgaacctaagtctcaagcaa
gttccgaaaaagggcgatttcgacttaaccaacgtgctaaagtctgtttatttcttcagt
taa
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