Culicoides brevitarsis: 134830645
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Entry
134830645 CDS
T10947
Name
(RefSeq) neogenin
KO
K06766
neogenin
Organism
cbri Culicoides brevitarsis
Pathway
cbri04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
134830645
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cbri04515
]
134830645
Cell adhesion molecules [BR:
cbri04515
]
Immunoglobulin superfamily
DCC/UNC5 family
134830645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Neogenin_C
Ig_2
Ig_DSCAM-DSCAML_C
ig
Pur_ac_phosph_N
V-set
Interfer-bind
Tissue_fac
C2-set_2
GH101_dom-5
Motif
Other DBs
NCBI-GeneID:
134830645
NCBI-ProteinID:
XP_063700263
LinkDB
All DBs
Position
2:34698615..34775081
Genome browser
AA seq
1494 aa
AA seq
DB search
MHQKHAKMLKIRKIGLIIVVTTLMLAAVCHTANVQQQQLQGLEFVTEPSDIVVPEGTSVL
LQCAGRLINQTTAVTSTNSKFSSSKFIKQAPNIRWRGPDGQDLGIVGDTFRTQLPNGSLY
ISSVDVNRGLTGAYQCLLTVDGIGTIVSRSARVSIADNPEVNQESAELYLVPGQTAYLKC
LSTPLPNGVSYRIQWLKDDFPLRFDATRMTLLQSGALEIDEVLPSDRGTYQCNITSGSFN
KISTKLNLNIKSPSGLPESFQAPAFATVPMSQTVREGSNLTLDCVANGNPKPQIKWLKNG
EDIDLNDLDSRFQMIGTGSLQITAIVEADSGDYQCRASNSVDSLDASASVQVQVPPKFTK
TPVNKVAHEKEELEFSCGITGKPTPIVQWLKNGDLITPNDYMQIVGGHNLRILGLISSDA
GMFQCVGTNPAGSVQAAARLRIIETVQPKRRQHHSKKSYAKNKQKYPAFDPEKQIINQKR
LLSKSVLDSLRSKDKNEFSKNSYVDPDTLLDASANDYDENSYENEDDDDDDPGTIHKIPP
GVDPKNFLHALTEGGNDKNQVMNFNAPFPNTIARHHNVANTGGALAPLPGAPRDVRAQIV
KPRFVTLSWDEPYKNPDEIVAYFVYYKLSTSERERKLTTTSRDERELNIQSLLPGKTYQF
RVVANSNHGIGDSSESLEVRTQPEENIAGPPQNVKAYPVSHTEINVEWAPPIVTNGIISK
YRIYYAEVENGVEIYADSTDTSATLSELRPYTEYAITVVPWNQNGMGDSSNEIVVRTYSS
TPSEPPSNVTFETTGATSILLQWEPPPLEERNGQITGYKIRYKKPKKQSGVETTPGNIRQ
WELKNLERTSAYQIKIAAMTINGTGPFTEWKHAETFESDLDESQVPGKPAFIVTRPSAES
VGVSWAPPTRPEIKVRGYILGWGKGIPDEDMVTLDEKVRYFELKNLEPNSEYVISLRARN
NQGDGIPVYDTVRTREEAPIELPTPLEVPVGLRAIPMSGTSIVLYWTDTTLNKNQHVTDN
RHYTVKYMAVSSSRVKYHNTTSLNTMISDLRPNTQYEFAVKVVKGRRESAWSMSVLNTTM
QAAPVSPPRDLIIRPNEQDASTVILEWLPPKHSVGPITGYTVFYTTDTTKRDKDWIQEQV
IGDKTMAIIRNLKPQYVYFFKVQTRNPKPTPFSAMVSYEVMSPMKTATSGINGIPMTALY
IIIGGVSLLIIVAILITVVACRKKTTESPEHLKKSYQKNNVGIIKPPDLWIHHDQMELKN
MEKNPQTVIPTPGSDIAPNSGSMTLPRNSHHEYDSTSTLSHITNSLDKRNYVPGYMGTSL
VNSPMERPMYPRSQYSLQRPPHVSMDQNMMQQSQIGTLSQPSNDNHYNYDTLPPNYNNVN
VTYAPGLAIDRGHSLKSFAMSGQPCGTPINNGQKTNLPAVTIRPQNASPYKKAATINTNT
LTNRLQTGPIVTHSSDEIQRLHPSNSTEELNQEMANLEGLMKDLSAITASEFEC
NT seq
4485 nt
NT seq
+upstream
nt +downstream
nt
atgcatcaaaaacacgcaaaaatgttaaaaataagaaaaattggattaattattgttgta
acaacattgatgctggccgccgtatgtcacacagcgaatgtacaacaacaacaactacaa
ggactcgaatttgtcacagagccatcggatattgtcgtgcctgagggtacttcggtactt
ttacagtgtgctggaagactgattaaccaaacgacagccgttacaagtacaaatagcaag
tttagcagtagcaaattcatcaagcaagccccgaacattcgatggcgcggacccgatgga
caagatttgggcatcgtgggcgatacttttcgcacgcaactccccaacgggtcactttac
atcagctccgttgacgtaaatcgcggtttaacgggcgcttatcagtgtttactgacagtt
gatggcatcggaacgatcgtgagtcgttccgctcgagtgtcaatagctgacaatcccgaa
gtgaatcaagaatcagcggaattgtatctggttcccgggcaaacggcgtacttgaaatgt
ctttcgacgccgcttcccaatggagtttcttacagaattcaatggttgaaagatgatttt
cccctgagatttgatgcgacgaggatgactttgctgcaatccggagcattggaaattgac
gaggtattgccgtcggatcggggaacatatcaatgtaatattacgtcgggatctttcaat
aaaattagcacaaagttgaatttgaatataaaatcgccgtcgggattgccggaaagtttt
caggcgccagcttttgcgacagttccaatgtcgcagacagtccgtgaaggaagtaatttg
acgttggattgcgtggcgaatggaaatccgaagcctcagatcaaatggctgaaaaatgga
gaagatattgatttgaatgacctcgattcacgtttccaaatgatcgggacaggatctctg
caaattacagcaattgtggaagcagattcgggcgattatcaatgcagagcgagcaattct
gtggattctctcgacgcttctgcctctgttcaggtgcaagttcctccaaaatttaccaaa
actcccgtcaacaaagtcgctcacgagaaggaagaattggaatttagttgcggcatcaca
ggaaaaccgacgccgatcgttcaatggttgaaaaatggcgatttaattactccgaatgac
tacatgcagatcgttggaggtcacaatttgaggattttggggttgattagttcggatgcc
ggcatgtttcaatgcgtgggaacaaatcctgcgggaagtgttcaagcagcagcgagattg
agaattattgagacagttcaaccgaaacgacgacaacatcattccaaaaaatcttacgcg
aaaaataagcaaaaatatcccgcttttgatcctgagaagcaaattatcaaccaaaaacgg
cttctttcgaagtcagttctcgatagtttgcgttccaaggacaaaaatgaattttccaaa
aattcttacgttgatcccgacacacttttggacgccagcgcgaacgattacgacgaaaat
tcgtacgaaaatgaagacgatgacgacgacgatccgggcacaattcacaaaatcccgccc
ggcgtcgatccaaagaactttttgcatgccttgaccgagggagggaacgacaaaaatcaa
gtaatgaactttaatgcaccctttcccaatactattgcacgccatcacaatgtagcaaac
accggaggagcattagcaccgttgccgggagctccgcgagatgtcagagcgcaaattgtc
aagccgcgattcgtgactttgagctgggatgagccttacaagaacccggatgagattgta
gcgtactttgtttactataaattgtcgacgagtgagagagagagaaaactaacaacgaca
tcacgtgacgaacgagaattgaacattcaatcacttttgccgggcaaaacgtaccaattt
cgtgtcgtagcgaacagcaatcatggcatcggagacagttcagagtcgttggaggtacga
acacagccagaagagaacatcgcaggaccgccacagaacgtaaaagcctatcctgtgtct
catactgagataaatgttgaatgggctcctccgattgtgacgaatgggattatttcgaag
tacagaatttactatgctgaggtcgaaaacggcgtcgaaatctacgccgacagcactgac
acctcagctaccctctccgagcttcgtccttacacggaatatgcgatcaccgtcgtgcca
tggaatcaaaacggcatgggagactcttccaacgagattgttgttcgcacttattcatca
acgccttccgaaccgccatcaaacgtgacatttgaaacaactggagcaacttccatcttg
cttcaatgggaacctcctccactcgaagagcgaaatggacaaataactggctacaaaatc
cgttacaaaaaacccaaaaagcaaagcggcgtcgaaacaactcccggaaacatccgccaa
tgggaactaaaaaacctcgaacgtacctccgcctaccaaattaagatcgccgcaatgaca
attaacggcacaggtccttttacggaatggaaacacgctgaaactttcgaaagtgacttg
gatgaaagtcaagttccgggcaaaccagcgttcattgtgactcgcccgagtgctgaaagt
gtcggcgtatcatgggcaccgcctaccagacccgaaattaaggttcgtggttacattttg
ggatggggaaagggcattccggacgaagatatggtcacgcttgatgaaaaagtgcgttat
ttcgagctgaaaaatttagaacccaacagcgaatatgtcatttcgttgcgggcaaggaac
aatcaaggcgatggcattccagtttatgacacagttcgtaccagagaagaggctcctatt
gaattaccaaccccgttggaggttcctgtcggcttaagagcaattcccatgtcaggaacg
tcaattgtgctgtattggactgacacgacgctcaacaaaaatcaacatgtcaccgataac
cgacattataccgtcaaatatatggcagtttcgtcatctcgcgtgaaatatcacaacacc
acaagtctcaatacgatgatttcagaccttcgcccgaacacgcagtacgaatttgcggta
aaagttgtcaagggacgtcgcgaatccgcatggtccatgagtgttttgaacacaacgatg
caagcggcgcccgtttctccgcctcgcgacttgataattcgcccaaatgagcaagatgcc
tctacggtaatcctcgaatggcttcctccgaagcacagtgtcggtccaataacgggttat
acggtcttttatacgactgacacaaccaaacgggataaagattggatccaagaacaagtg
attggcgacaaaacaatggcaattattcgaaatctcaagccgcaatacgtttatttcttc
aaagttcaaacgagaaaccccaaaccgacacctttttcagcgatggtatcttatgaagtc
atgtcccccatgaaaactgcaacgtcgggcatcaatggaatacccatgacggcactttat
atcatcatcggaggcgtttcgctgttgataattgtcgcaattctcatcacagtagtggct
tgtcgcaagaaaacgaccgaatctcccgaacatttgaagaaaagttatcagaaaaacaac
gttggcatcataaaaccgccagatttgtggattcatcatgaccaaatggagctcaagaac
atggaaaagaacccacaaacggtaattccgacgccaggaagcgatatcgcgccaaattcg
ggctccatgacactcccgcggaactcgcatcatgagtatgacagtacaagtaccctttcg
cacatcacaaattcgctggataagaggaattatgtgccaggttacatgggaacgtctttg
gtgaactctccaatggaacgcccgatgtatcctcggtcccaatatagtctccaacgaccg
ccgcatgtctccatggatcaaaatatgatgcaacagtcacaaattggcactttatctcaa
ccatcgaacgataatcactacaattacgatacactgccccctaattacaacaatgtaaat
gtcacatacgcccctggattagcgatcgatcgtgggcattcgctcaaaagttttgccatg
tcgggacaaccgtgcggaactcccatcaataatggtcaaaaaacgaacttgcctgctgta
acaatccgacctcaaaacgcctcgccatacaagaaggcagccactatcaacaccaatacc
ctcacaaatcgcttacaaactggtccaattgtcacacattcctccgatgagattcaacga
ttgcatccgagcaactccacggaggagctaaatcaggaaatggcaaatttagaaggtctt
atgaaggatttgagcgccattacagccagtgaattcgagtgttaa
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integrated database retrieval system
