KEGG   Culicoides brevitarsis: 134830798
Entry
134830798         CDS       T10947                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
cbri  Culicoides brevitarsis
Pathway
cbri03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cbri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    134830798
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cbri03041]
    134830798
Spliceosome [BR:cbri03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    134830798
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40_Prp19 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR3_2nd WDR55 WD40_Gbeta WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C PRP4 Beta-prop_Aladin NBCH_WD40 ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_WDR41 Ge1_WD40 Beta-prop_WDR75_2nd WD40_like Beta-prop_ACSF4 eIF2A Beta-prop_SPT8 WD40_RFWD3 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 134830798
NCBI-ProteinID: XP_063700452
LinkDB
Position
2:complement(15567018..15570927)
AA seq 506 aa
MSDDEEIQYVKKQKTIHYGSLEAAERAKLVKSESGTNGSESIADIVKETPQIHTSNDYFD
IEEEVQKDKLALLEEFERKKKARHVQVSTDDSEIKRKLRELGEPICLFGEGPFERRVRLK
ELLSAIGESGTKRTQEDEPKSRSGQEQESTWYHEGPEALRIARLWIANYSLPRARDRLKY
ARELKELPSAVKAGRTVELQKKIQSLQLQCSQVGDTRPVNCCNFNEDSSLLLTGSWTGVS
KVWSVPDCDLVQTLKGHSLNIGGAVFRPGVKKDEENVVAMASSCADGMVKLWAFKNEESI
ADITGHCPHRVSKLAFHPSGRFLGTACYDASWRFWDLEQKQEVLHQEGHAKAVHCIAFQG
DGSVSVTGGLDTFGRVWDLRTGRCIMFLEGHLGAVYGTDFSPNGFHIITGSADNTIKIWD
LRRRQAVYTIPAHTNIISDVKYQKNGGQFLVSTSYDNTAKIWSNKTWQPLKTLTMDGKIM
SVDVSNDNLYIATTSYDRTFKLWTPE
NT seq 1521 nt   +upstreamnt  +downstreamnt
atgtcggatgacgaggaaattcagtacgtgaagaaacaaaagacgattcattatggctcg
ttggaggctgcggaacgagcgaaactcgtcaaaagtgagtccgggaccaatggatccgaa
tcgattgctgatattgtgaaggaaacgccgcaaattcacacatcgaatgactatttcgac
attgaagaggaagttcaaaaagacaaattagctcttttggaggaatttgagcggaaaaag
aaagcgagacatgttcaagttagcacagatgactcggaaattaagcgaaaattaagagaa
ttaggtgaaccgatttgtctttttggtgaaggtccgttcgaaagacgtgtgcgattgaag
gaacttttgtcggctatcggcgagtcaggtacaaaacgaacacaggaagacgagccaaaa
agtcgttcagggcaagaacaagaatcaacttggtatcacgaaggtcccgaagctttacga
atcgcgcgtctctggatcgccaattattcactgcctcgcgccagagatcgtctcaaatac
gctcgcgaactaaaagaacttccgagtgccgtaaaagccgggcgtacagtcgaattacag
aagaaaattcaatcgcttcaacttcaatgcagtcaagttggcgacactcgtcccgtcaat
tgttgtaatttcaacgaagattcgagtctccttcttacgggcagctggacaggcgtttcc
aaagtttggtctgtgccggattgtgatctcgtacaaacgctcaaggggcattcgcttaac
attggaggtgcggtttttcggcctggcgttaaaaaagacgaggaaaatgtcgtggcgatg
gcttcgagttgtgcggatggcatggtgaagttgtgggcgttcaaaaatgaggaatcaatc
gctgatattacgggacattgtccgcatcgcgtgtcaaagttggcgtttcatccgtcgggg
agatttttgggaaccgcttgttacgatgcttcgtggagattttgggatttggaacagaaa
caagaagtgttgcatcaagaggggcatgcaaaagcagttcattgcatcgcttttcaggga
gatggaagtgtgtcagtcacggggggtctcgacacctttggcagagtttgggatttgcga
acaggtcgttgcattatgttcctcgagggccacttgggagctgtctacggaactgatttc
tcgcccaatggctttcacattatcacaggaagtgctgacaatacaattaaaatttgggat
ttgagacgaagacaagccgtttacacaattcccgctcacacaaatatcatttccgacgta
aaatatcagaaaaatggaggacaatttctcgtgtcgacgagttatgataacacagcaaag
atttggagcaacaaaacgtggcagcccctcaaaaccctcaccatggatggaaaaatcatg
tctgtcgatgtttccaatgacaatttgtacatcgccacaacctcatacgatcggactttt
aaactttggacacctgaataa

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