Culicoides brevitarsis: 134830825
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Entry
134830825 CDS
T10947
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
cbri Culicoides brevitarsis
Pathway
cbri03440
Homologous recombination
cbri03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
134830825
03460 Fanconi anemia pathway
134830825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbri03032
]
134830825
03400 DNA repair and recombination proteins [BR:
cbri03400
]
134830825
Enzymes [BR:
cbri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
134830825
DNA replication proteins [BR:
cbri03032
]
Eukaryotic type
DNA Topoisomerases
134830825
DNA repair and recombination proteins [BR:
cbri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
134830825
FA (Fanconi anemia) pathway
134830825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF
Zn_ribbon_GRF_2
GlutR_dimer
AIR2-like_ZnK4
Transpos_assoc
Motif
Other DBs
NCBI-GeneID:
134830825
NCBI-ProteinID:
XP_063700481
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Position
2:complement(1954140..1956934)
Genome browser
AA seq
884 aa
AA seq
DB search
MVRLILGALNQNVMKFLNVAEKNDAAKTIAGLLSRGTMQRREGFSKFNKIYEFDCQVQGQ
HAKMVMTSVSGHLLSYGFSQSYRSWNSCDPQQLFDAPVIKQCSEQFVNIRRTLEREVRSC
QKLIIWTDCDREGENIGFEIIDVCRGVKPNIAVFRAKFSEITEQSVRRALNNLAQPDKRQ
SDAVDVRSELDLRIGAAFTRFQTLRLQKAFPTDISGLVSYGSCQFPTLGFVAKRYRDIEN
FIPQNFWKLKVEHKVKEINTEFSWARNRLFEKSFCESFLMLCQANPVAEVTNVVSKPKSK
WRPTALDTVELEKLGSRKLKLSAKTTMTIAEKLYTKGFISYPRTETNIFSKEIDLQGLVQ
NHVNHPDWGEFSQKVLDWGPNPRNGKKSDQAHPPIHPLKVADGLSGDEKKVYDLIARHFL
ACLSKDAQGSETVVTIKIADEEFSASGLIVLEKNYLEVYPYDKWNSKEIHDYQRGETFEP
TELGMVEGKTSAPNLLTEADLVALMEKHGIGTDATHAEHINTIKERLYIAEQRGFLTPNM
LGIGLVEGYEAMTLTLAEPELRAGLELELKQICDGVKNPKDVLRNQISLYKEAYRVMTDK
IRALDDALSRRLQSSAVEVPNIAPVSAPSIERVMICNKCKTNSILLKRKKNNTGYYLSCD
SYPSCQNTLWLPEELESIEVLDQKCEKCGNRRNKMKFKLSTSTMRIMGTTNRDYTCCIFC
DQIFKSALMLNTDALTKVYDANNSPPAPVNAPARQNNFNGRQNPSATGWRNSQPPRGKGS
KTKKPPKNQNFQPIECPKCKAMTRVLTVKKDGPNKGRQFHLCETDGFVKFADEVTTQTNS
TGNNRGRASSAGNTTRTSGGTRKCGLCRSEGHTRNRCPNNRDDS
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggtcagattaattttgggcgcgttaaatcagaatgtgatgaagttcctgaatgtagcg
gagaaaaatgatgctgcgaagacaattgcggggcttttgtcgcgagggacaatgcaacgc
cgcgaaggattctccaaattcaacaaaatctacgaattcgattgccaagtgcaaggacaa
cacgcaaaaatggtgatgacatccgtttcgggacacttgttaagctacggattcagtcaa
tcgtatcgcagttggaacagttgcgatccccaacaacttttcgatgcgccggtaatcaag
caatgcagcgaacaattcgtcaatatccgacgaacgctcgaacgtgaagtacgttcgtgc
caaaaactcatcatttggaccgattgcgatcgtgaaggcgaaaatattggcttcgaaatt
attgatgtgtgtcgcggcgtgaaacccaatattgctgtttttcgtgcaaagttctctgaa
atcacggaacaatctgttcgacgtgctctaaacaacttggcgcaaccggataagcgtcaa
agtgacgctgtcgatgttcgcagcgaactcgatttgaggattggagcagcttttacgcga
tttcaaacacttcgcctgcaaaaagcatttcccacagacatcagtgggctcgtttcttac
ggttcatgtcaatttccgacgcttggatttgtcgcgaaacgctatcgagacatcgaaaac
ttcattccgcaaaacttttggaagctcaaggtcgaacacaaggtcaaggaaatcaacacg
gagttcagttgggcgcgaaatcgtctttttgagaagagtttttgcgaaagtttcctcatg
ttgtgtcaagcaaatcctgttgctgaagtcacgaatgtcgtttcgaagccaaaaagtaaa
tggagacccacagcgctcgacactgtcgaattagagaaactcggatcgcgcaaattgaag
ctcagtgcaaagacaacgatgacaattgcggaaaaattgtacacaaaaggtttcattagt
taccccagaacggaaacgaacatcttttcaaaggaaattgacttgcaaggtttggtccaa
aatcacgtaaaccacccagattggggagaattttcgcaaaaagtgctcgattggggtcca
aatccgagaaatggcaaaaaatcggatcaagctcatcctccaattcatcctctcaaagta
gctgatggattatcgggcgacgaaaagaaagtttacgatctaattgcgcgtcattttctc
gcttgtttgagcaaagatgctcaaggatcggaaactgtcgtgacaattaagatcgcagac
gaggaattttccgcaagtggcttgattgttctcgaaaaaaactatttggaggtttatccg
tatgacaaatggaactccaaagagattcacgactatcaaagaggcgaaacgtttgaacca
acggagctcgggatggtcgaaggaaagacttcggcaccgaatttgctcacagaagccgat
ttggttgctttaatggagaaacatggcattggaacagatgcgacacatgcggagcacatc
aatacgatcaaagaacgtctttatatcgccgagcaacgaggatttttgacaccaaatatg
ctcggaatcgggttagttgagggttatgaagcgatgacactcacattagctgagcccgag
ttgcgagctggcttggaattggagcttaaacagatctgcgatggcgtgaaaaacccgaaa
gacgtgctgcggaaccaaatttctttgtacaaagaggcgtatcgcgtgatgacagataaa
attcgagcattagacgatgctctaagtcgacgtcttcaatcatccgctgttgaagtacca
aatatcgctcctgtttctgctccaagcatcgaacgagtgatgatctgcaacaaatgtaaa
accaacagtattttattgaaacgtaagaaaaacaacacgggctactatttatcgtgcgac
agttatccaagttgtcaaaacacgctgtggctgcccgaggaactcgaatctatcgaagtt
ttggaccaaaaatgcgaaaaatgcggaaatcgtcgaaacaagatgaaattcaagctcagt
acgtcgacaatgcgaatcatgggaacaactaatcgtgattatacgtgttgcattttttgc
gatcaaatcttcaaaagtgcccttatgctgaacacggatgctcttacgaaggtttatgat
gcgaataattcgccgccggcgcctgtaaatgctccggcacgacaaaataatttcaatggc
agacaaaatccttcggcgacgggttggagaaattcgcaaccgccacgaggtaaaggctca
aagacgaaaaaaccgccgaaaaatcaaaattttcaaccaatcgaatgtccgaaatgcaaa
gcaatgacacgcgttcttacagtaaagaaagacggaccaaataaaggaaggcaatttcat
ctttgcgagacagatggattcgtaaaattcgcagatgaagtcacaacgcaaacgaattct
acgggaaacaatcgcggaagggcttcaagtgcgggaaatacaacgagaacgtcaggagga
acacgaaaatgtggactttgtcggtctgagggacatacaagaaatcgatgcccaaataat
cgcgacgatagttga
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