Culicoides brevitarsis: 134831067
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Entry
134831067 CDS
T10947
Name
(RefSeq) DE-cadherin
KO
K27891
DE-cadherin
Organism
cbri Culicoides brevitarsis
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cbri04515
]
134831067
Cell adhesion molecules [BR:
cbri04515
]
Cadherins
Cadherin related
134831067
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Ig_Shg
CADH_Y-type_LIR
Laminin_G_2
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Laminin_G_1
Cadherin_2
EGF_TEN
EGF_laminin
Motif
Other DBs
NCBI-GeneID:
134831067
NCBI-ProteinID:
XP_063700779
LinkDB
All DBs
Position
2:complement(28772697..28784714)
Genome browser
AA seq
1520 aa
AA seq
DB search
MKCLKKSNKLPILLLLLTIAAASRTIVSANNDSKNVNQKSESGNKSANSRTVRQSSVNDA
YFDGGPVTQELQHSNFYNYDINYREQQQQQPELRHRIDNHKPAFRDCKSYNPVVKEELPA
GAYVIQVRADDIDENDEIEYKFVLAPAERPRFRLDSKTGVITTQHIFDRDEPIREKEIYI
TVRATDNGYPKLDDVCTFKVTIEDVNDNPPVFDKVKYDERMSEDTKVNQIVTRITASDLD
DGDNGYMEYDIIKEKDYEYFRIDKETGNLFLTRPIDRRPEDSYTITVRASNVKSMEQEQE
TQTEVKIRVVGSSLRAPQIIHTSGDTITLKENFGEYQKKLFSLSAISNVDGKPDVVFELL
NGRTEQTNSKKTFVGDQQKNDFSIMLGNPLDYETTTDYTLTVVVRNVHLLSAEYTIRVIV
EDVNDNIPFFTEVNTGTVLENEPVGTQVMQVRAFDMDGTSANNIVSFELVDNKEFFEIDE
HTGNITTLKEFDREERDTYNVKVLAKDNSPSALYKTGKPNQGQQVFAITIGDKNDHSPKF
KHDEYIANTVSEDANKHTTVIEVKAIDIDVASQITYTITTGNIDNAFNIDNSGTIRVNKQ
LDYEKITNYTLRIRAFDGIYDDFATVTIKIANVNDNAPEFSQQTYNAEAEEESIKPGCIA
VMQAYDPDIKDRNAPQHIKYSITKLEQQQLLDIDSRGCLSMKAPLDRDPPHGFKKWQILV
EAIDEDGNGLRSLAEVIITLTDINDNAPFLSNKMPVVWYENRDPGKIVDLTAEDYDEPRN
GAPFHFQLDQHADENILSSFKITGNELHATRMFDREEQKEYFIPILIGDNGMPPQRNVSV
FHLIIGDENDNAMQEGSSKIFVYNFKGEAPDTAIGRIYVNDPDDWDLPDKSFSWRDGRAH
DNFELNTDDGTITMRYGTRGGVYVLDFVAYEQSKIIPPHQVDATVEVTVREIPEEAVRKS
GSIRFQGMTAEEFIMPRFDMGPSPKERLTKTLAEMFNISTDNVDVFTVYQPEAKNPKVID
VRFSAHGSPYYEAEKLNGMVAQRQGQLEGELNMKMRMVKIDECLIERNACQGGSSCTNIL
NYSERTLAVYTNTTSFVGVEAYDQAICECRVEQMETSCLNGGTPFNNGCECPDGFEGPHC
ELISIGFYGNGYAMYPPISACNLTVINLEVSPVRKDGLVMYIGPLSYNSILPVQDFLALE
LKDYFPVLIVDYGTGAVRIVHNHIQLKPGKHYQVEIKLQRTGIEMIVDNCKLSTCMSLGA
PLGPNEFLNVNAPLQLGGSAGNMELLGRAYNWSHYPQNTGFTGCIRNLTVNDKTYNLGQP
AYAKNIDPGCTRSMAVASTFGVDRNFLIAILVCIALLIILLLAVVVHKRHNDGWMDSKDI
DDIRETIINYEDEGGGERDTDYDLNVLRGPPIYEDKPYMQDYLQKEAHEVPDIGAFLTDK
KDACDKDQDAYPNDDVRYYAYEGDGNSTGSLSSLASCTDEGDLSFNYLSNFGPRFRKLAD
MYGEEPSDEESNVDDDGWRI
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcctcaaaaaatcaaataaactgcctattttgctgctactactaacaatagcc
gctgcgtccagaacaatagtcagtgcaaacaatgacagcaaaaatgtaaatcaaaagagt
gaaagtggcaataaatccgcgaattcgcgaaccgttcgacagtcgagcgtcaacgatgcc
tatttcgacggtggtcccgtgacgcaagaactgcagcacagcaatttctacaattacgac
atcaattatcgcgaacaacagcaacaacaacccgaactgcggcatcgcatcgacaatcac
aagcccgccttccgcgactgcaagtcatacaatccggtggtgaaagaggaattgcctgcc
ggcgcgtatgtcattcaagtgcgtgccgacgacattgacgaaaacgacgaaatcgagtac
aaattcgtgttggcgcccgccgaaagaccgcgtttccgtctcgactccaaaacgggcgtc
atcacgacgcagcacatcttcgatcgcgacgaaccgattcgcgaaaaggaaatttacatc
acggtccgtgccacagacaacggctatccgaagctcgatgacgtgtgcacgttcaaggtg
acaatcgaggatgtcaacgacaatccgccggtcttcgacaaggtcaagtacgacgaacgc
atgagcgaagacacgaaagtcaatcaaattgtgacgcgtattacggcctccgacttggat
gacggcgacaacgggtacatggaatacgacatcatcaaggagaaggactacgaatatttc
cgcattgacaaggaaacgggaaatttgttccttacgcggcccattgatcgtcgccccgaa
gattcttacacgattacggtgcgtgccagcaacgtcaagagcatggaacaggagcaagag
acccaaaccgaggtcaaaattcgtgttgtgggctcgagtttgcgtgcgccgcaaattatt
cacacgtcgggcgacacaattacgctcaaagaaaattttggcgaataccaaaagaaactt
ttctcactttccgccatctcgaatgtcgatggaaagcccgatgttgtcttcgaactcctg
aatggtcgcaccgaacaaaccaacagcaagaaaactttcgttggggaccagcaaaagaac
gattttagcatcatgctgggcaatccgctcgactacgaaacgaccacagactacaccctc
actgtcgtcgttcgaaacgttcatttgctgtcggccgaatacacgattcgcgtaattgtc
gaagacgttaacgacaacattcccttctttacggaagtcaatacgggtactgtgctggaa
aatgagcctgttgggacgcaagttatgcaagtccgggcttttgatatggatggcacgtca
gcgaataatattgtgtcgtttgaactcgtggacaacaaggaattcttcgaaattgacgag
catacgggaaatattacgacgcttaaggaattcgatcgggaggaacgggatacgtacaat
gtgaaggtgctggcgaaagataactcgccatcggctttgtataaaacgggaaaaccgaat
cagggacagcaagttttcgccattacgattggggataaaaatgatcatagtcccaaattt
aaacatgatgaatatattgcgaatacggtatctgaagatgctaataagcacacgaccgtt
atcgaagtcaaagcaatcgacatcgatgttgcgtcacaaattacatacacaattaccacg
gggaatatcgacaatgccttcaacatcgacaactcgggaacgattcgtgtgaacaagcag
ctggattacgaaaaaatcaccaactacacgttgcgaattcgtgcctttgacggcatctac
gacgactttgccacagtaacgatcaaaattgccaacgttaacgacaatgcaccggaattc
agtcagcaaacgtacaatgccgaagctgaagaggaaagtatcaagcctggttgcattgcc
gtcatgcaggcctacgatcccgatatcaaagatcgcaatgcgccgcaacacattaaatat
tccatcacaaagttggagcagcagcagttgctcgacatcgatagtcgcggttgtttgtcg
atgaaagcgccattggatcgcgatccgccgcacggcttcaaaaaatggcaaattctcgtc
gaagccattgacgaagacggcaatgggttacgatcgttggcggaagtgatcattacgctg
acggatattaacgacaacgcgccgtttttgtcgaacaaaatgcccgtggtgtggtacgag
aatcgcgatcccggcaaaattgtcgatttaacggcggaagattatgacgaaccacgcaac
ggcgctccttttcacttccaactcgaccaacatgccgacgagaatatcttgagttccttc
aaaatcaccggaaatgaacttcatgccacacgaatgtttgatcgcgaagagcaaaaagag
tattttatcccgattttaattggcgacaacggcatgccgccacaacgtaacgtctccgtg
ttccatttgatcatcggcgacgagaacgacaatgccatgcaagagggttccagcaagatt
ttcgtctataatttcaagggagaggcacctgacaccgccatcgggcgcatttatgtcaac
gatcccgacgactgggacttgcccgataaatctttcagttggcgcgatggtcgcgctcat
gataatttcgagttaaataccgatgacggaacaataacgatgcgttatggcacgcgaggc
ggcgtttatgtcctagattttgtcgcgtacgagcaatccaagataattccgccgcaccaa
gtcgatgcaacagtcgaagtaacagttcgggaaatccccgaagaagctgttcgcaagagc
ggatcgattcgtttccaaggtatgacggcggaggaattcattatgccgcgttttgacatg
ggtcctagtccaaaagagcgtttaacgaagactttggctgaaatgttcaacattagcaca
gataatgtggatgtttttacggtatatcaaccggaagcgaagaaccctaaagtaatagac
gttcgtttttcggcccatggaagcccctattacgaggctgagaagctaaatggcatggta
gcacaacgccaaggccagttagagggagaattgaacatgaaaatgcgcatggtgaagatc
gacgagtgtttaattgagagaaatgcctgtcaaggagggtcatcttgcactaatatcttg
aattattccgaacgaacgctcgctgtttacacaaatacgacatctttcgtgggtgtcgaa
gcctatgatcaagcaatttgcgagtgtcgggtcgaacaaatggaaacgtcatgcttgaat
ggcggaactcccttcaataatggctgcgaatgccccgatggctttgagggcccacactgc
gaactcatctcgatcggcttttatggcaacggatatgccatgtaccccccaatttcggcc
tgcaatctcactgtcatcaatttggaagtgtctccggtgcgaaaagatggcttagtgatg
tacatcggtccattgagctacaactcaatattaccggtacaagatttcttggctctcgaa
ctcaaagattacttcccggtgttgattgtggactacggaacaggcgctgtacgcatcgta
cataaccatattcaactgaaacccggcaaacattaccaagttgagatcaagttgcaacgc
acaggtatcgaaatgatcgtagacaactgtaaattatcgacttgcatgagtttaggagct
cccttgggaccaaatgagttccttaatgtcaatgccccgctccaacttggcggttctgct
ggaaatatggagttacttgggcgtgcctataattggagtcattatccgcagaacacggga
tttacgggttgcatccgaaatttgaccgttaacgataaaacttataatctcgggcagcca
gcttacgcgaaaaatatcgatccgggatgcacgcgttccatggcagtcgcttccacgttc
ggtgtcgaccgaaatttcctcattgccattctcgtgtgcatcgcgttgctcattatcctg
ctactcgcggtcgttgtgcacaaacgccataacgacggttggatggacagcaaggatatc
gacgatattcgcgaaacgatcataaattacgaagatgagggcggcggcgaacgtgatacg
gattacgacttgaatgtccttcggggtcctccgatttacgaagacaagccatatatgcaa
gattatctgcaaaaggaggcacacgaagtgcccgatatcggggcattcctcaccgacaag
aaagatgcctgtgataaggaccaagacgcctatccgaatgacgatgtgcggtattacgcg
tacgaaggtgatggaaacagcacgggatcgttatcaagtctcgcttcgtgcacggacgag
ggtgatctcagtttcaattatttgagcaactttggaccgcgtttccgcaaactcgccgat
atgtatggcgaggaaccgagcgacgaggaatccaatgtcgacgacgacggatggagaatc
taa
DBGET
integrated database retrieval system
