Culicoides brevitarsis: 134831111
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Entry
134831111 CDS
T10947
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
cbri Culicoides brevitarsis
Pathway
cbri03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
134831111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbri03019
]
134831111
03009 Ribosome biogenesis [BR:
cbri03009
]
134831111
03036 Chromosome and associated proteins [BR:
cbri03036
]
134831111
Enzymes [BR:
cbri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
134831111
Messenger RNA biogenesis [BR:
cbri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
134831111
Ribosome biogenesis [BR:
cbri03009
]
Eukaryotic type
90S particles
RNase
134831111
Prokaryotic type
rRNA processing factors
134831111
Chromosome and associated proteins [BR:
cbri03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
134831111
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_MRPL44
Motif
Other DBs
NCBI-GeneID:
134831111
NCBI-ProteinID:
XP_063700833
LinkDB
All DBs
Position
2:10781395..10788326
Genome browser
AA seq
1325 aa
AA seq
DB search
MSFPWDFSKPPPGFPSVPHVDPAQATDYAQNPYYSYQSYPGYAPAPYNMGYPEPYYAPTD
YQIPPPPPPGTSQLPQSVPYHDRGRSDRPERDYRRDRESHSRDYRSQSRSHKPSYERDSR
SRSHRDDGYRDSRYSTDRSRHSPRSSSYRDRDSRRDRESSSSRSKDVRDDSYRHRDRSRG
ASIVSSSGKSSENKPQTERDRILANWRKNFCETEDDITRKLSELSQITNAKETWIRSSPA
DVYYKRVNDKEVTATPRLEALCDLFEEELSKRSAKAREKMEPYVPQPRKRVIKVCRHKSE
KCSSSDDSDSDIDEIEDDCTMEELSRKIQHPYRLHPDLWHNEPLEMNDGPLCRCSAKSRR
TGIRHGIYPGEVSYPKCDPNSNNAHKLHHYRITISPPTNFLTKTPTIIKYDMHEFLFEGF
SLLSHEPIDELPTCKVIRFNIEYTILYVEEQMPENFTIRQLDLFADYVFQELLELVDFSL
MPSSATPENSCPAYHFLPRYVRDLPDNGKEILAMSEVMRYLLDSATPLIDHATLNDMNNL
NQHEWQDYVDYVKGMVVTRPGMRPCSIRVDQIDRNVSDLPEVAKSDDGVPFPVVVHFGIR
PPQLSYAGNTEYQKAWREYVKFRHLIANMSKPSFEDKRKLEAKENKLQEMRTQGRMKRNI
TVVVTSKGFYRTGIMCDMVQHAMLVPVLSGHLRFHRSLNILEESIGYKFKNRYLLQLALT
HPSYKENFGTNPDHARNSLTNCGIRQPEYGDRKIHYMNTRKRGINTLINIMSRFGKEYET
DSNITHNERLEFLGDAVVEFLTSIHLFHMFPDLEEGGLATYRAAIVQNQHLAVLAKKLHL
EEYMLYAHGSDLCHELELRHAMANCFEALMGALLLDGGIKVADKVFSFALFMENDELRAT
WENYPPHPLQEQEPLGDRQWIESYEMLKNLTKFEDSIGIQFRHIRLLARAFTDRSIGYTH
LTLGSNQRLEFLGDTVLQLICSEYLYRHFPEHHEGHLSLLRSSLVNNKTQAVVCDDLGMT
QYAVYSNPKADLKTKDRADLLEAFLGALYVDKDLEYCETFCHVCLFPRLQDFIMNQDWND
PKSKLQQCCLTLRTMDGGEPDIPVYKVTECSGPTNTRVYTVAVYFRGKRLASATGHSIQQ
AEMNAAKQALEDSKGLFPQLDHQKRVIARSMRKQKVPIENDTKEDKKDHRDNSSNDESSK
LPMQYRKRAQTSSDDSDKSEKSDASSVKSVKKRSKRKKRRIRSPKIRVTPPNAPSDSHKM
ESYSSLSDNSLPSADDDDDMSIKKSDIKQMEKDLCELNDSTSNVAIGKVEGTEELSSDAE
SGEIF
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atgagttttccgtgggattttagtaaaccgccgcccggatttccgtctgtgccgcacgtc
gatccagcgcaggcgacagattacgcacaaaatccgtattattcgtatcaaagctaccca
ggatatgctccggcaccgtataacatgggctatccagaaccgtattacgctcccacagac
taccaaattcctccgccgccgccgccaggaacgtcacagctgccacaaagtgttccgtat
cacgacagaggacgatcagatcgcccggagcgagactataggagagatcgggagagtcat
agtcgcgattatcgttcgcaatctagaagtcacaagccatcgtacgaaagagacagtcga
tcacgctcacatcgagatgacgggtacagagattcaagatattcgactgatcgaagtcga
cattccccgagatcttcctcgtatcgtgaccgagactccagaagagacagagaatcttca
tcttcgaggtcaaaagatgttagagatgattcttacaggcatcgggatcgttcgaggggt
gcttccattgtcagtagttcaggaaaatcatcggaaaataaaccacaaacagaacgcgat
cgcatcctcgccaactggcgcaaaaatttctgcgaaacggaagacgacatcacacgaaaa
ttgagcgaactctcccaaatcacgaacgccaaagaaacgtggattcgctcctctcccgcc
gacgtctactacaaacgcgtcaacgacaaagaagtcaccgccacgccgcgcctcgaagcc
ctttgcgaccttttcgaagaagagctgagcaaacgcagtgccaaagcgcgcgaaaaaatg
gagccatatgtgccgcaaccccgcaaacgtgtcataaaagtttgtcgtcacaaatccgaa
aaatgctcgtcgtccgatgacagcgacagtgacatcgacgaaatcgaagatgattgcacg
atggaggaactttcgcgtaaaattcaacatccctaccgcctgcatccagatttgtggcat
aacgagccgttggaaatgaacgatggaccgctttgtcgttgcagcgccaagtcacgtcgc
accggaatccgtcacggaatttatccgggggaagttagttacccgaaatgcgatcccaat
tccaataacgcacacaaattgcatcattatcgcatcacaattagtcctcccacgaatttt
ctgaccaaaacgccgacaattatcaagtacgacatgcacgaatttttatttgaaggattt
tccttgttgtctcacgagccaattgacgagttgcctacttgcaaggtcatccgtttcaac
atcgaatacacaattttgtacgtggaagaacaaatgccggaaaatttcacgattcgccaa
ctggatctcttcgccgattacgttttccaggaattattggagctcgttgacttttctctg
atgccatcaagtgccacgccggagaattcgtgtcctgcttaccattttttgccgcgttac
gtgagagatttgcccgacaacggcaaagaaattctcgccatgagtgaagttatgcgatat
ttactcgactcggcgacgcctctcatcgatcacgccactctcaacgacatgaacaacttg
aatcagcacgaatggcaggattatgttgattacgtgaaaggaatggttgttacgcgtccc
gggatgcgcccttgcagtattcgtgtcgatcaaattgatcgaaatgtctccgatttgccg
gaagttgcgaaatccgatgatggggttccgtttccggtggttgtgcatttcgggattaga
ccaccgcaactcagttacgcgggaaacacggaatatcagaaagcgtggcgggagtatgtg
aaatttagacatttgattgcgaacatgtcgaagccaagctttgaggataagagaaaattg
gaggcgaaggagaataaattgcaggaaatgcgaacccaaggaaggatgaaacgcaatata
acggtcgttgtgacatcaaaaggcttctatcgcacgggaattatgtgtgacatggtgcaa
catgcgatgctggtgcctgttctctctggtcatttgcgtttccatcgatctctgaacatt
ctcgaggagtccatcggatacaaattcaaaaatcgctaccttctccagctggctctcaca
cacccgtcatacaaggaaaatttcggcacaaatcccgatcacgcacgcaacagtctcacc
aactgcggcatccgtcaacccgaatacggcgatcgcaaaatccattacatgaacacgcga
aaacgcggcatcaacactctcatcaatatcatgtcgcgcttcggcaaggaatacgaaact
gacagcaatatcacgcacaacgaacgtctggaatttctcggggatgcagttgtggaattt
ttgacgtcaattcatctgtttcacatgttcccggatttggaggaaggcggtttggcgact
tatcgtgcggcaattgtgcaaaatcagcatttggcggtgctggcgaaaaaactgcatctc
gaggagtacatgttgtatgcacacggatcggatttgtgtcacgaactggagttgcgacat
gcgatggcgaattgtttcgaagctctaatgggcgctttgttgctcgatggcggcattaaa
gtcgccgataaggtcttttcgttcgctctttttatggaaaatgacgaattacgagccacg
tgggagaattatccgccgcatccgttgcaggaacaagaaccgctgggcgatcgacagtgg
atagagtcctatgaaatgttgaaaaacctcacgaaattcgaagattcaatcggaattcaa
ttcagacacattcgattgttggcacgagctttcacggatcgcagtatcggctacactcac
ttgacattgggctcgaatcagcgtctggagttcctcggcgacacagttttgcaattaatt
tgctcggaatatctgtatcggcattttccggagcatcatgagggacatttgtcgttgttg
cgcagcagtttggtcaataacaagacgcaagcggtcgtctgtgacgatctcggaatgacc
caatatgccgtttattcgaacccgaaagcggatctcaagacgaaagatcgcgcggatttg
ctggaagcctttttgggagcactttatgttgataaggatctcgagtactgtgagactttt
tgtcatgtgtgcctgtttccgcgattgcaggactttattatgaaccaagactggaacgat
ccgaaatcaaagttgcaacaatgctgtttgacgcttcgcacaatggatggaggcgagcca
gatattcccgtttataaggtgacggaatgtagtggacctacgaatacccgagtttacact
gtggcggtttatttcaggggaaaacgtttggcatccgctacgggccacagtatccaacaa
gctgagatgaatgccgctaaacaagcacttgaagactccaaaggtctcttcccgcaactg
gatcatcaaaaacgtgtcattgcacgaagcatgaggaagcaaaaagtcccgatcgaaaat
gacacgaaagaagacaaaaaagatcatcgggacaattcatcaaatgacgaatccagcaaa
cttcccatgcaatatcgcaaacgtgctcaaacttcctccgatgacagtgacaaaagtgaa
aaatctgacgcctcgtcggtgaaatcagtgaaaaaacggagcaaacgcaaaaaacgtcga
ataagatcgccaaaaattcgtgtcacgccaccaaatgcgccctccgactcgcacaaaatg
gagagttacagctcgttgtcggacaatagtttgccatcagcagacgatgacgacgacatg
tccatcaagaagagcgacataaagcaaatggaaaaggatttgtgtgaattgaatgacagc
acgagcaatgtggcaattggaaaagttgaaggcacggaagaattgtcctcagatgcggag
tcgggagaaattttttag
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integrated database retrieval system
