Culicoides brevitarsis: 134831451
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Entry
134831451 CDS
T10947
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
cbri Culicoides brevitarsis
Pathway
cbri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134831451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbri03019
]
134831451
03012 Translation factors [BR:
cbri03012
]
134831451
Enzymes [BR:
cbri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
134831451
Messenger RNA biogenesis [BR:
cbri03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
134831451
Translation factors [BR:
cbri03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
134831451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
nSTAND3
ATPase
AAA_19
AAA_22
ResIII
Sigma54_activat
AAA_14
NB-ARC
AAA_7
NACHT
PhoH
TsaE
NPHP3_N
Cas3-like_C_2
SRP54
FtsK_SpoIIIE
AAA_11
AAA_23
Motif
Other DBs
NCBI-GeneID:
134831451
NCBI-ProteinID:
XP_063701251
LinkDB
All DBs
Position
2:complement(35173035..35177866)
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AA seq
952 aa
AA seq
DB search
MSNRYGNRYARGGRGRGGNFNSNRSRDDDSTAGFSRGGGRGGHPAGLRGRDIGLYYASMS
KQRREEDEKRLEKDITIPSNKILEIQKYLKNCKYLLDDQKNEFSEDSEAKKFQQEFERVT
KTEMEDQIQLSIAMRMSQEPDETKKINFSKPKGNLELQNFREKLPCWQFRDEIVKIIREN
QVVLIKGETGCGKTTQVTQFILDDAIKSQNSQKISIVCTQPRRISAVTVAERVAIERGEK
LGDSVGYNIRLDSIMPRNRAGSILYCTTGCVLKYLESDPALLDVTHVILDEVHERDTNSD
LLMGIFKVIIKYRPELKIILMSATLNAEVFANYFDGCPTLEIPGKIYPVDEFYLEDVLSM
LNFTQFRENSRREMPFWARHRRGFKDPAADLREILSPHVSGLRKKFGPNVVQALMNPQSE
NADLELIEELIFYISMNLGPGAILVFLPGYGQISKLCTSLTKSGRFPERKFKIFPLHSLL
TGADQKKVFERCEQGVRKIIVATNIAETSVTIDDVVYVINAGKRKLTNYDAETNVQVLEE
MWVSKANSKQRKGRAGRCQPGICYHLYTRARENSLEDDILPEIQRIRLDDIILSLKILGI
SDVKTFLSKLISVPNQKIIEHSMTLLKRLEALTPEELLTPLGYHLARLPVDAQTGKMILF
GALFSCLDPVTCIAASLTFRDPFYTVMGKERELDRIKLEFARDSKSDHLMVANVMRNWRR
AQQERDNNFLRENFLSFQTLKQLEDMQEQFYKLLGEAKFIEGRGVLDQKTNRNSDNEKVV
RGVICAGLYPNIAKIMRVKTRKNFADATPMVETKEDGKCSIHPCSVNARQRTFNHQYLVY
HLKQRTQKLNILDCTTVSPYSILFFGDLIESKPEEGTIQVADYLKFKCDAETQKLLIQLR
EGLNKLLKEKIWRPSPVDWDGHEGALLMAIIHLLSIEDSNEYDDDCDDLNYS
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcgttacggtaacagatacgctcgcggaggtcgaggaagaggcggaaatttc
aactcgaatcgcagcagagatgatgactcgacagccggattttcgcgtggcggagggcgc
ggaggacatccagcagggttgcgaggacgagatatcggcttatattacgcctccatgagc
aaacaacgtcgtgaggaagacgaaaaacgcttggaaaaagacataacaatcccttctaat
aaaattttggagatccaaaaatacctgaaaaactgtaaataccttttggatgaccagaaa
aatgaattttcagaagattctgaagcaaaaaagtttcaacaagagttcgaacgtgtcaca
aaaaccgaaatggaggatcaaatccaactttcaatagcgatgcggatgagccaagaaccg
gatgaaacgaaaaaaatcaatttttccaagccaaaagggaatttagagctccaaaatttc
cgtgaaaagctcccttgttggcaatttcgtgatgaaatcgtaaaaattattcgcgaaaat
caagttgttctcatcaaaggggagacaggatgcggaaaaacgacgcaagtaacgcaattt
atcctcgatgacgcgataaaatctcaaaattcccaaaaaatttccattgtttgtacccaa
cctcgtcgaatttctgctgttactgtagcagaacgtgtcgcaatcgaacgcggcgagaaa
ttgggcgattctgtcggttacaacattcgtttggactcgataatgccccgaaatcgcgcg
ggaagtatcttgtattgcaccactggatgcgttttaaagtatttggaatccgatccggcg
ttgctggatgtcactcatgtcattctagatgaggttcatgaacgagatacgaactcggat
ttgttaatgggcatcttcaaggtcatcattaaataccgcccggagcttaaaattatcctc
atgagtgcgactttgaatgcggaagtcttcgcaaattactttgacggatgcccgacactc
gaaattccgggaaaaatttatcctgtcgacgagttttacttggaagatgtactgtcgatg
ctgaatttcacgcaatttcgggaaaatagtaggcgagaaatgcctttttgggcacgacat
cgtcgcggatttaaagatccagcagcagatttgagggaaattttatcgcctcacgtgtcg
gggttgcgaaaaaaattcggaccgaacgttgttcaagcactaatgaacccccaatcggaa
aatgctgacctggaattgatcgaagaattaattttttatatctcgatgaatttagggcct
ggagcgattttggtttttcttccgggatacgggcaaatatcgaaactttgtacaagtttg
accaaatctgggcgatttcccgaaagaaaattcaaaatttttccgcttcattcacttttg
acgggcgccgatcagaaaaaagtcttcgaaagatgcgaacaaggcgttcgaaaaataatt
gtagcaacaaatatcgccgaaacttcggttaccatcgacgatgtcgtctacgtgatcaac
gctgggaagcgaaaactcacgaattacgatgcagaaacgaatgttcaggtgttagaggag
atgtgggtgtcaaaagccaattccaaacaacgaaagggtcgcgcaggacgatgtcaaccc
gggatttgttatcatttgtacacgcgggcgcgtgaaaattcactcgaggatgacattttg
ccggaaattcagcgaattcgcttagacgatatcatcttatcattgaaaattttgggcatt
tctgacgtaaaaactttcctgtcgaagctaatttcggtcccaaaccaaaaaatcatcgaa
cacagcatgacattgctcaaaagacttgaagctttaacgcctgaagagcttttaacgccc
ctcggatatcacttggctcgattgccggtcgatgcgcaaaccggcaaaatgattcttttt
ggcgcgctttttagttgtcttgatcccgtgacttgcattgcggcgagtttgacgtttcgc
gatcctttttacaccgtcatgggcaaagaacgtgaattggatagaattaaacttgaattt
gctcgggactcgaaaagtgatcatttgatggttgcgaatgtcatgagaaattggcgacga
gcgcaacaagaaagagataataattttttgcgcgaaaattttttgagttttcaaacgttg
aaacaactcgaggacatgcaggaacaattttataaacttcttggtgaagcgaaattcatt
gaaggacgaggagttttggatcaaaagacgaatcgcaactcagacaatgaaaaagtcgtg
agaggagtcatttgtgcgggactttatccgaatattgcgaagattatgagggttaaaacg
aggaaaaatttcgctgatgcaactccaatggtcgaaaccaaagaagatggcaaatgttcg
attcatccgtgttccgttaatgctcgacagagaacttttaatcatcaatatcttgtttat
catctgaaacaaaggacgcaaaagcttaatattctagattgtacgacagtgagtccttat
tctattttgttttttggcgatttgatcgaatccaagccagaagaaggaacaattcaagta
gcagattacctgaaatttaaatgtgatgcagaaacacaaaaattgctgatacaactgaga
gaaggattaaataaattgttgaaggagaaaatttggagaccttcgcctgttgattgggat
ggacatgaaggagcgcttttgatggcaatcatccatcttctctcaatagaagactccaac
gaatacgacgacgactgtgatgacttaaactacagttga
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