Culicoides brevitarsis: 134832055
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Entry
134832055 CDS
T10947
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
cbri Culicoides brevitarsis
Pathway
cbri03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
134832055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbri03009
]
134832055
Ribosome biogenesis [BR:
cbri03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
134832055
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML
ANAPC4_WD40
WD40
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
Tricorn_2nd
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_NUP159_NUP214
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_NWD2_C
Beta-prop_WDR75_1st
PALB2_WD40
Beta-prop_Vps41
Beta-prop_IFT122_1st
eIF2A
Motif
Other DBs
NCBI-GeneID:
134832055
NCBI-ProteinID:
XP_063702015
LinkDB
All DBs
Position
2:complement(2848150..2850697)
Genome browser
AA seq
682 aa
AA seq
DB search
MKAHDNEPFVDLHNVEFYNFTPRAILHMKSDRKGLLAVARSDRTIEVWNIASEAPILLQT
LYPKGNFIIEGLAWAQGQLFSVDNDGQMLQWDLNSGEIHKIMRVTGSAASCIDVSPNEDL
ICVGTEEGYLNIFSVSEENGVLYQKIMDKQEGRVVCVTFDPTGKLLATGSVDNLRVWDVQ
TGHVLHKMSVPRLETKKEAIVWCVTFVKDLKIISGDSTGRLTVWDGRLGVQISSLVASKV
DILAITATEDMENVFCSGIDPDIKSYSEITIRKEGEETRQWVRGKGRLIHNHDVHALVWH
NKKLFSGGQDGFLTISSYPPKIVNKYGPFLASPSATISQEQRTILLKYQNYLEIWRLGTT
EARDEPGRHDISLKNQPKKLLELKSKHGKHIIDAKLSPNGSWIVYTTPELTKIFNFVAAE
DQIPDLRIVDVPEEMLGAQKIAFNGASDVIFASNSNKSIQIFTLGVDSWQHTTTIDTSGH
LSGVIRQLEVSSCGKFLAVMSSGNDVVLYHYQKKWQKLLSLPKHSHAPTAMGFRPQCKSI
VVAFADQKVFEYNFKEMSFVFSSFVDCGNTKHAIKGVTFDPRRADVVLLHTELGINVLRM
MTEEEEEDEEQNNSIIRLKKNKKGSERRDPEGKTVVKTVKEYEHLIHLEWLQEKELIAVH
INTLQLVEQLPPALKQKKFGIS
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgcacgacaacgagccttttgtggatttgcacaatgttgaattctataatttt
acgccgcgagcaattttgcacatgaaaagtgatcgaaaggggcttttagcggttgcgagg
tctgatagaacgatcgaagtatggaatattgcttcagaagccccaattttgcttcaaact
ttgtatccaaaaggaaatttcattattgaaggtcttgcatgggctcaagggcaactcttc
agtgtcgacaatgacggacaaatgcttcaatgggacctgaattcgggcgaaattcataaa
attatgcgagtaacgggcagtgctgcgtcttgcatcgacgttagtccaaatgaagactta
atttgcgtcggcacagaagaaggatatttgaatattttttcagtttccgaggaaaatggc
gttttatatcaaaaaatcatggataaacaagaaggaagagtcgtttgtgtgacttttgat
ccaacgggaaagcttttggcaacaggaagtgtcgataatttacgagtttgggatgttcaa
acgggtcatgtgttgcacaaaatgagcgttcctcgtctcgaaacgaaaaaagaagcgatt
gtttggtgtgtgacgttcgttaaagacttgaaaattatttcgggagactctacaggacga
ttaacggtttgggatggaagactcggagtgcaaatttcctcacttgtggcatcaaaagtc
gacattttagcgataacagcgacagaagacatggaaaatgtcttttgttcgggcattgat
cccgatattaagtcatattcggagatcacaatccgaaaagagggcgaagaaacacgacaa
tgggtgcgtggaaagggtcgtttaatacacaatcacgatgtacatgcgttagtttggcac
aacaaaaagcttttttcgggaggacaagatggatttttaacaatttcatcttatccgccc
aaaattgtcaacaaatatggaccatttttggcatctccttcagctacaattagtcaggaa
cagcgaacaatcctcttgaaataccaaaattaccttgaaatttggcgattgggaacgaca
gaagcaagagacgaacccggaagacatgatatttcattgaaaaatcaacctaaaaaactt
ctcgagctcaaaagtaaacacggaaaacacataatcgacgcgaaattgtctccaaatggt
tcgtggattgtctatacgactcctgaactcacaaaaatcttcaattttgtcgctgctgaa
gaccaaataccagatttgcgtatcgttgatgtccccgaagagatgctcggagcacaaaaa
atcgcctttaacggagcaagtgacgtaattttcgcctcaaacagcaacaaatccattcaa
attttcactttgggagtcgattcgtggcaacatacgacgacaattgacacttcgggacat
ctgagcggcgtaattcgacagctggaggtctcaagttgcggaaaatttcttgctgtgatg
tcgtcgggcaatgacgttgtactgtatcactatcagaaaaagtggcaaaagcttctttcg
ttgccgaaacacagtcatgctccaacagcaatgggtttcagaccgcaatgcaagtcaatt
gtcgttgcgtttgccgatcaaaaagtcttcgagtacaatttcaaagagatgtctttcgtt
tttagcagttttgtggattgcggcaatacgaaacatgccattaagggagtgacttttgat
ccgagacgagctgatgttgtgttgctgcacacggaattgggaattaacgttttgagaatg
atgacggaggaggaagaagaagacgaggagcaaaataattcgataattcggttgaaaaag
aacaagaaagggagtgaaaggagagatcctgaaggaaaaactgttgttaagacagtcaaa
gagtatgaacatctaatccatctggaatggcttcaagaaaaggaactcattgctgttcat
atcaacactttacaactcgtcgagcaacttcctccggcgctcaaacaaaagaagttcgga
atatcctaa
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