Culicoides brevitarsis: 134832101
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Entry
134832101 CDS
T10947
Name
(RefSeq) putative uncharacterized protein DDB_G0286901 isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
cbri Culicoides brevitarsis
Pathway
cbri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134832101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbri03000
]
134832101
03019 Messenger RNA biogenesis [BR:
cbri03019
]
134832101
04121 Ubiquitin system [BR:
cbri04121
]
134832101
Enzymes [BR:
cbri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134832101
Transcription factors [BR:
cbri03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
134832101
Messenger RNA biogenesis [BR:
cbri03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
134832101
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
134832101
Ubiquitin system [BR:
cbri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134832101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-UDP
zf-RING_2
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
134832101
NCBI-ProteinID:
XP_063702070
LinkDB
All DBs
Position
2:complement(20234666..20238427)
Genome browser
AA seq
811 aa
AA seq
DB search
MSDSSQHDDQVECPLCMEPLDVDDLSFYPCSCGYQICRFCWHRIRTDENELCPACRKAYS
ENPADFTPLSQEQIVALKAEKRQKDQQKKQKINEDRKHLANVRVVQKNLVFVVGLPPRLA
DPEVLKRHEYFGKYGKIHKVVINPSTAYAGAQGPSASAYVTYVNNNDSLRAIQSVNNITI
DGRLIKTSLGTTKYCSNFMKNQPCPKPDCMYLHELGDEEASFTKEEMHQGKHQEYEKKLH
DTLIALTQNEELKSSAEKSERNEKNEKSEKSEKNEKSNGSGKENSNGNSNSSSNSSSAET
KVKKPAQGKRNKETWPSLSNSPTPKSAGKQVNSKENGKNDSKCNKSEKTKAEKNKTSFEE
ENISQEGTWNTASQEDNHAKEIAIDKANMDESERKDEEAYFNEKANTDFTNGEHKQEDPA
LIETENKTTIDRPINSQLPDLLSGTEIDRHYFNLAGDKALGPQNKTESLPDWEDSLKYLM
MRTNAEDNAKQQFRKTDELFAFNNLTLNDLLMDNRNALFPDQYHHRDETKQSNCSSNMLK
FFDFHKNLQNQQQNYQKTNTNPVEKPYSMMNECLNKPEGGSPRQTSSFQQQDTQFGVNNK
SNSSKNNLLNSMYHMQNASVADELGFDPFAETQKALAELMRDEVTRKKMDEQDMAKRQNT
IHAPPGFNSVNACKLNSWTNNAYPQLGQNAFNANKSPSMSNYQDWTSLDPAIVSFRQFPT
YGQMPENLEPRQQPQPNPQPMSDYLQYSQLGGNSNFGMDPSQYGLNGIRNLQTQMTQNPF
NWFSHNQNNYQQNSVSFPPGFQANLNGNKMG
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgagtgattcaagccaacacgatgaccaagtcgagtgccctttgtgcatggaacctctg
gatgttgacgatttgtctttttatccgtgctcctgtggatatcagatctgcagattttgt
tggcaccgtatcaggacggacgagaatgaactttgtccagcttgtagaaaggcgtattcc
gagaatcccgccgactttactccactgtcgcaagaacagattgtggcgttaaaggcggaa
aagcgccagaaagaccaacaaaagaagcaaaagataaacgaggatcggaagcatctggcg
aatgtgcgtgtggtgcagaagaatttggtctttgttgtggggcttcctccgagactcgcg
gacccggaagtgctcaagaggcacgaatacttcggaaaatatgggaaaatccataaagtt
gtaataaatccgagtacggcgtatgcgggggcgcagggaccttcagcgtctgcgtatgtc
acgtatgtgaataacaacgactctttgagggcgatccagagtgttaacaacataacaatc
gatggtcgtctcatcaaaacgagtctgggcaccacaaagtattgcagtaactttatgaag
aaccagccttgtccgaagcccgattgtatgtatctgcacgagttgggcgacgaggaagct
agctttacgaaggaggaaatgcatcaaggcaaacatcaggagtacgagaagaaactgcac
gacacactcatagcgctgacacagaacgaggaattaaagagctccgcggagaagagtgaa
cggaacgagaaaaatgagaaaagtgaaaagagtgagaagaatgagaagagcaacggttcg
ggcaaagaaaacagtaatggcaacagtaacagtagcagtaatagtagtagtgcggaaaca
aaggtgaaaaaaccggcacaaggcaagcggaacaaggaaacgtggcctagtttatcgaat
tcaccgacgccaaaatctgcgggcaaacaagttaattcaaaggaaaacggaaagaatgac
tcaaaatgcaacaaaagtgaaaaaacaaaggcggaaaagaacaaaacatcgttcgaggag
gaaaatatttcacaagaaggcacatggaacactgcatcacaagaagacaaccacgccaag
gaaattgcaattgataaagcgaacatggatgagagtgaaaggaaggacgaagaagcgtat
ttcaatgaaaaagccaacacagatttcacaaatggcgaacacaaacaggaggatccagct
ttaattgagacagaaaacaagacgacaatagatcgcccaataaattcacaactcccagac
ctactgagcggaacggaaatagatcgacactacttcaatctggcaggggacaaggcactg
gggccacaaaacaaaacagaatctctacctgattgggaagacagcttgaaatatttgatg
atgagaacgaatgcggaggacaatgccaagcaacaattccgtaaaacggatgaacttttc
gcattcaataatttgacgctgaatgacttgctaatggacaacagaaatgccctatttccg
gatcagtaccatcacagagatgaaaccaagcagagtaattgctcgagtaacatgttaaag
ttcttcgattttcacaaaaatctacaaaatcagcagcaaaattatcaaaaaacgaacaca
aatcccgttgaaaaaccgtattcaatgatgaacgagtgcttgaacaaaccggaaggcgga
agtccacggcaaacaagtagctttcagcaacaagacacacaattcggagttaataacaag
agtaattcgtcaaagaataacttgttgaactccatgtatcacatgcaaaatgcctccgtg
gctgatgaattagggtttgatccgttcgctgagacacaaaaagctttagctgagttgatg
cgtgacgaggtcacccggaagaagatggacgaacaagatatggcgaaacgtcaaaacaca
atccacgctccgccaggcttcaacagtgttaatgcctgtaaattgaattcttggacaaac
aatgcgtacccacaacttgggcaaaatgcattcaatgccaacaaaagtccaagcatgtca
aactaccaggattggacaagtttggatccggcaatcgtttcatttcgtcagtttcccaca
tatggacagatgcctgagaatctagagccccgacaacagccacaaccgaatccgcaaccg
atgtctgactatctacaatattcgcaactgggtggaaattcaaactttggtatggatcca
agccaatacggactaaatggaattagaaatttacagacacaaatgacacagaatccattc
aattggttttcccataatcaaaacaactatcaacagaattcggtttcatttccgccagga
ttccaagcaaatttaaatggaaacaaaatgggttag
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