KEGG   Culicoides brevitarsis: 134832266
Entry
134832266         CDS       T10947                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
cbri  Culicoides brevitarsis
Pathway
cbri03030  DNA replication
cbri03410  Base excision repair
cbri03420  Nucleotide excision repair
cbri03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cbri00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    134832266
   03410 Base excision repair
    134832266
   03420 Nucleotide excision repair
    134832266
   03430 Mismatch repair
    134832266
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cbri03032]
    134832266
   03036 Chromosome and associated proteins [BR:cbri03036]
    134832266
   03400 DNA repair and recombination proteins [BR:cbri03400]
    134832266
DNA replication proteins [BR:cbri03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    134832266
  DNA Replication Termination Factors
   ELG1-RFC complex
    134832266
Chromosome and associated proteins [BR:cbri03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    134832266
DNA repair and recombination proteins [BR:cbri03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     134832266
  Check point factors
   HRAD17(Rad24)-RFC complex
    134832266
SSDB
Motif
Pfam: AAA Rep_fac_C DNA_pol3_delta2 RCF1-5-like_lid AAA_16 AAA_22 Rad17 AAA_24 AAA_assoc_2 AAA_lid_RFC1 AAA_11 DUF815 Mg_chelatase bpMoxR AAA_30 AAA_5 RuvB_N AAA_14 AAA_19 SLFN-g3_helicase nSTAND3 ResIII AAA_7 AAA_18 AAA_25 DNAX_ATPase_lid
Other DBs
NCBI-GeneID: 134832266
NCBI-ProteinID: XP_063702322
LinkDB
Position
2:complement(27492696..27493977)
AA seq 354 aa
MHAFLKGAKPADVAKSGGEGPSKEKKKRPVPWVEKYRPKTVEDVVEQGEVVSVLRECLSG
ADLPNLLLYGPPGTGKTSTILAAARQLFGDLFKDRVLELNASDDRGISVIRTKVKSFAQL
TASACRPDGKPCPPFKIIILDEADAMTHAAQAALRRTMEMHTKTTRFCLICNYVSKIIQP
ITSRCTKFRFKPLKEEMVIERLQLISDSELIKVDPEALKAIVGISGGDMRRAITTLQSCY
RLKGNENAITETDILEISGFVPPKYLEKFLSACKSGDFKQLEEFVEDFLYEAFSIGQFFE
QFNEFIVFHDGLTDKQKAGILDRLGECCFRLHNGGSEYIQIMDFGCATIQALRQ
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgcatgcatttctcaaaggagcgaagcccgctgatgtcgcaaaatccggcggtgaaggt
cccagcaaggaaaaaaagaaacgtcccgtgccatgggtagaaaaatatcgtcccaaaacc
gtagaagacgtcgtcgagcaaggcgaagtggtttcggtgctgcgggaatgtctctcgggt
gccgatttgccaaatttgctgctctacggaccaccgggcacgggtaaaacgagtacaatt
ctcgccgctgcacgtcaattgttcggcgatttgttcaaagatcgcgttctcgagctaaat
gcctccgacgatcgtggcatcagtgtcattcggaccaaagtaaagagttttgcgcaactc
acagcgagcgcttgtcgtcccgatggaaagccatgtcccccttttaaaattattattttg
gatgaggcagatgccatgacgcatgccgcccaagctgcgctgcgacgaaccatggaaatg
cacacaaaaaccacgcgattctgcctaatttgtaattacgtgtcgaaaataattcaaccg
atcacgtctcgatgcacgaaattccggttcaagccgctaaaagaagagatggttattgaa
agattgcaactgatttcggactcggagcttataaaagtcgatccagaagcgttaaaagcg
attgttggcatcagcggaggtgatatgagacgcgctattaccactttgcagtcgtgttat
cgtctcaaaggcaacgaaaatgcaatcaccgagacggatatcttggaaatttcgggattt
gtgcccccgaagtacttggaaaaatttttgtcggcatgcaaatcgggcgatttcaagcaa
ctagaagaatttgtcgaagatttcttgtacgaagccttcagtattggacaatttttcgaa
caattcaacgaatttattgtattccacgatggtttgacggacaaacaaaaggccggaatt
ctcgatagactcggcgaatgttgcttccgactgcacaacggcggttccgagtacattcag
atcatggattttgggtgtgcgacaattcaagcgttgcgtcaatga

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