KEGG   Culicoides brevitarsis: 134832330
Entry
134832330         CDS       T10947                                 
Name
(RefSeq) collagen alpha-1(IV) chain
  KO
K06237  collagen type IV alpha
Organism
cbri  Culicoides brevitarsis
Pathway
cbri04382  Cornified envelope formation
cbri04512  ECM-receptor interaction
cbri04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cbri00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    134832330
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    134832330
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    134832330
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cbri04147]
    134832330
   00536 Glycosaminoglycan binding proteins [BR:cbri00536]
    134832330
Exosome [BR:cbri04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   134832330
Glycosaminoglycan binding proteins [BR:cbri00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   134832330
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 134832330
NCBI-ProteinID: XP_063702385
LinkDB
Position
2:13850283..13865411
AA seq 1781 aa
MATPLKRLRIVTTTALLAFLIVNTEGQLWQGLTGAIGYLGPSDSRRADYNRQPEIDPSYE
LIDTVRGAQGPPQKNCTASQGCCQPKCFAEKGNRGLPGLPGLQGPKGQRGFPGNEGLPGP
KGTKGDAGPIGPRGPKGDRGRSGSPGFPGTAGQPGIPGQPGLPGISGVDGCNGTDGLPGL
PGLQGIPGPRGFPGAPGDKGDKGEPALDPNPIFLKGQKGERGADGTPGIPGQVGEVGPRG
PKGDRGSDGRPGLQGPRGDPGIKGECYHGATGQKGEKGEPDYGEHNLSPSESIGPKGEAG
ERGYTGDKGEPGLHGSPGNPGADGFDGPKGEKGLPGQPGPRGRDGAFGPPGPVGQKGDRG
NEGLPGLDGKPGQKGEPGRDGERGFPGLPGPTGPPGGGKGRPGPPGPEGPRGFRGPPGPK
GLDGYPGEPGPRGFPGPKGGQGIPGRPGPEGLAGEKGAKGESGLPGMPGQQGPRGYPGLP
GPEGQRGEPGLPGIGLMGPKGDAGVPGYPGLKGNKGERGFPGIMGAPGDSRDGKPGLPGI
PGRIGEKGEAGRPGIPGEKGDVGAKGDIGGRCSDCRPGFKGDKGEPGLDGRPGEMGPVGL
PGERGYPGETGADGPPGRQGVAGPPGRDGLDGPPGPEGHPGKDAVIIVDQIKPEKGDKGE
RGLPGLPGPKGDRGLDGAPGYDGPKGDTGPKGDAGRVGLPGIDGIPGRNGRDGFPGPKGE
FVKGEPGLPGIHGDKGDKGAAGRIGPKGEAGHCPPPNLVLSKGERGDRGLKGEPGPRGFE
GAPGEKGDRGFDGLEGAPGAPGPPGPVGARGLNGPPGEKGNQGPTGFPGPRGRDGLRGPA
GRPGDKGGKGEPGLSMVGKPGPKGNMGLRGPKGDRGLSGERGTDGLPGPVGYPGDKGDTG
EPGPPGFPGLEGPKGDAGPKGPQGRTGPPGRPGVDGIRGQPGSKGEPGLQGLVGLPGQKG
DRGYPGPEGLKGVKGQIGQPGSPGLAGKTGAPGLTGEKGEKGDKGDYGPPGKDGLTGPPG
PIGMKGDRGFPGPPGLDGLDGVTGEKGDRGFPGLVGPKGEPGEVSEKGQKGEPGPPGLRG
SEGRPGYDGLPGMKGDAGLPGYGRQGLPGPKGDVGEPGLDGIPGANGEKGDQGPPGFPGV
KGDKGNAGLPGIPGSPGMDGLRGADGLVGAPGPKGERGFKGAPGLTGLEGPKGDKGEPGP
AGLIGLMGPKGDRGLTGDRGLPGPSIEIKGEKGEPGLNGIVGMPGLIGEPGRTGEPGFNG
EKGDRGIPGPRGMPGLEGLPGEKGDQGYPGEKGEVGPAIVGEKGLPGLPGKNGRDGPIGL
SGEKGEKGLPGLPGNPGLRGSPGLVGRQGEKGDRGLPGLQGEPGRDGLPGPMGKKGEIGY
PGEKGDQGPPGFPGQQGEKGNAGMPGPPGRDGLPGLKGDRGLVGDVGPVGFPGQVGEKGD
MGLRGLDGRDGPPGEKGDKGEQGPPPPPSERGPPGLPGLPGEKGNQGLPGPSGVPGLDGA
RGDKGDIGPVGLPGPRGPPGEKGDLGLPGPPGVDGRPGYPGAKGEAGAACTNAPDYLTGI
LLVKHSQTTEVPQCEPGHVKLWDGYSMLYVDGNDYAANQDLGSPGSCVRRFSTLPALACG
PNNVCNYASRNDRTFWLSTSAPIPMMPVAEREMQDFISRCVVCEVPTNVVAVHSQSLSVP
ECPSGWDSLWIGYSFVMHTAVGHGGGGQALSGPGSCLQDFRATPFIECNGGKGHCFFYET
LTSFWLVTVDHTQQFRRPEMETIKAGNLLSKVSRCNVCIRN
NT seq 5346 nt   +upstreamnt  +downstreamnt
atggccacccctttaaaacgacttagaatagtaacgacaacagcattattagctttttta
attgtcaacacagagggtcaattatggcaaggtttgacgggcgccatcggctatttggga
ccatcggattcacggcgggcggattataacagacagcccgaaatcgatccgagttacgag
ttaattgacacagtgcgtggcgctcaggggcctccgcagaagaattgcacggcgtcgcaa
ggttgctgtcagccaaaatgttttgcggaaaagggaaatcgtggtttgcctggattgccg
ggattacaaggacctaaaggtcaacgtggctttcccggaaatgaaggtttgccgggcccg
aaaggcacgaagggagatgcaggcccaattggacctcgaggaccgaagggagatcgcgga
agaagcggatctcctggatttccgggaactgcaggacaaccaggtattccgggacaacct
ggattgccgggtatttcgggtgttgatggttgcaatggtactgacggtttgcctggattg
ccaggacttcaaggaattcccggcccacgtggtttccctggcgctcctggagacaaggga
gacaaaggagaacctgctctcgacccgaatccgatctttttgaagggacaaaagggagaa
cgaggcgccgatggaactcccggtattcccggacaagttggagaagttgggccccgagga
ccaaaaggagatcgcggatctgatggaagacctggattgcaaggacctcgaggagatccc
ggaattaagggagaatgttatcacggagctacgggacaaaagggagagaagggcgaaccc
gattacggagaacataatctctcgccatcggaaagtatcggaccgaaaggagaagcaggt
gaacgtggttacactggcgacaagggagaacctggacttcatggatctcctggaaatccc
ggagctgatggatttgacggacctaaaggagaaaaaggtttgcccggacaacctggacca
agaggacgtgatggtgcttttggacctccgggacctgttgggcaaaaaggagatcgcgga
aatgaaggtcttcctggattagatggaaaaccaggacaaaaaggagagccaggacgtgac
ggagaaagaggtttccctggattgccaggcccaacaggacctccaggcggcggaaaagga
cgtcccggacctccaggacctgaaggacctcgtggattcagaggacctccaggaccaaaa
ggattagatggatatccaggagaaccgggaccaagaggattccccggaccaaaaggaggt
caaggaattcccggaagaccaggacctgaaggtcttgcaggcgaaaagggagcaaaagga
gaatctggattgcctggtatgccgggacaacaaggacctcgcggatatccagggcttcca
ggacctgaaggacaacgcggagagcctggattgccaggaattgggcttatgggaccaaaa
ggagatgctggcgtgcccggatatcccggattgaagggaaataagggagaacgtggattc
cctggtattatgggagctccaggagactcacgcgacggaaaacctggattgccaggaatt
cccggaagaattggcgaaaaaggagaagcaggacgtcccggaattcccggagaaaaggga
gatgttggcgcaaagggagatattggaggacgttgttctgattgtcgaccaggattcaag
ggagacaaaggagaacctggattagatggtcgtcccggagaaatgggtcccgttgggctt
cccggagaacgcggatatcccggagaaacgggagctgatggacctccaggacgtcaaggt
gttgcaggacctcccggaagagatggtttagatggtcctccaggtcctgaaggacatccc
ggaaaagacgccgttatcattgtcgatcaaattaagcccgaaaaaggagacaagggagaa
cgaggtcttcccggacttccaggacccaaaggagatcgaggacttgatggagctcccgga
tacgatggacctaaaggtgatacgggaccaaaaggagatgccggaagagttggattgccc
ggtattgatggaattcccggaagaaatggtcgagatggtttccccggacctaagggagaa
ttcgttaagggagaacccggattgcctggcattcatggcgataagggagacaaaggagct
gcaggaagaattggaccaaagggagaagcgggacattgtccgccgccaaatcttgtcttg
tcgaagggcgaacgaggagatcgtggcttgaaaggagaacctggaccacgtggttttgaa
ggagctcccggagagaagggagatcgcggatttgatggattggaaggagctcctggtgca
ccaggaccaccgggtcccgttggagctcgtggtttgaatggacctccaggtgaaaaggga
aatcaaggacctactggattccccggaccaagaggaagagacggtttacgaggacctgca
ggaagacccggagataagggcggaaaaggagagccaggactttcaatggttggcaaacct
ggaccaaagggaaatatgggcttgagaggacctaaaggagatcgtggattgtcaggagaa
cgaggaactgacggtttgcccggacctgttggatatccaggagacaaaggagatactgga
gagccaggacctccaggattccctggattagaaggacctaaaggagatgctggaccaaaa
ggacctcaaggaagaacgggacctcccggaagacccggcgttgatggtattcgaggacaa
ccaggatctaagggagaacctggattacaaggcttagttggtttgccaggacaaaaagga
gatcgtggttatccaggtcctgaaggtcttaaaggcgttaaaggacaaattggtcaacca
ggctcaccaggtcttgctggaaaaactggagctcctggattaactggcgaaaagggagaa
aaaggagacaaaggagattacggacctcccggaaaagatggtttaacaggacctccagga
cctattggcatgaaaggagatcgcggattccccggacctccaggtttggatggattggat
ggcgtaactggcgaaaagggagatcgtggattccctggattagttggtccaaagggagaa
cccggagaagtttctgaaaagggacaaaagggagaacctggacctcctggattgcgagga
agcgaaggaagacccggatatgacggacttccaggaatgaagggagatgcaggattaccc
ggatatggaagacaaggattgccaggacctaaaggagacgttggagaacctggtttagat
ggtattccgggagcaaatggagaaaagggtgatcaaggacctcctggattccccggagtt
aagggagacaaaggaaacgctggattgcctggaattccaggatctccgggtatggatgga
ttacgaggtgctgatggtctcgttggagcccccggacctaaaggagaacgaggtttcaag
ggagcccctggattaacaggtttagaaggacctaaaggagacaagggagaacctggacct
gctggattaattggtttgatgggacctaaaggagatcgtggattgacaggagaccgaggt
cttccaggaccttcgattgaaatcaaaggtgaaaaaggagaacctggattgaatggaatt
gtcggtatgcctggattaattggagagccaggaagaactggagaacctggattcaatggc
gaaaagggagacagaggaatccccggacctcgtggaatgcccggattagaaggtttaccc
ggagaaaaaggagatcaaggttaccccggagaaaagggagaagttggacctgctattgtt
ggcgaaaagggattgcctggactgccaggtaaaaatggtcgtgatggtcctattggtttg
tcaggcgagaagggagaaaagggattacctggtttgcccggaaatcctggacttcgtgga
tctcctggattagttggaagacaaggagaaaagggagatcgcggattacctggtttgcaa
ggcgaacctggaagagacggtttgccaggaccaatgggaaagaagggagaaattggatat
ccaggagaaaagggagatcaaggacctcctggattccccggacaacaaggagaaaaagga
aacgcaggcatgccaggacctccaggtcgcgatggattaccaggattgaagggagatcgc
ggtttagttggagatgttggtcctgttggattccccggacaagttggagagaaaggtgac
atgggattacgcggattagacgggcgtgatggacctccaggagaaaagggagacaagggt
gaacaaggacctcctcctccgccatccgaacgtggacctccaggattgcctggattacct
ggagaaaagggaaatcaaggtttgccaggtcccagcggagttcctggattggatggtgct
cgcggtgacaagggagatattggtcctgttggtttgccaggtcctcgaggacctcccgga
gaaaagggtgatcttggattgccaggacctccaggcgttgatggtcgtcccggatatccc
ggagcaaagggagaagctggcgctgcttgtacaaacgctcctgattacctcacaggaatt
ctcttggtcaaacacagtcaaacgacggaagttcctcaatgcgaaccgggccacgtgaaa
ttgtgggatggttattccatgttgtacgtcgatggcaacgattatgccgccaatcaagat
ttgggctcacccggttcctgcgttcgtcgtttctcgacattgccagcacttgcttgcggc
ccgaacaacgtttgcaattatgcgtcgcgtaacgatcgcacattctggttgtcaacatcg
gcgccaattcccatgatgcctgtcgctgaacgcgaaatgcaagactttatttcgcgttgc
gtcgtctgcgaagtgcccacgaatgtcgttgcggtgcacagtcaatcgttatcggtacct
gaatgccccagcggatgggattccttgtggatcggctacagtttcgtgatgcataccgct
gtcgggcatggcggcggcggtcaagcgttgtcaggacccggatcttgcttgcaagacttc
cgcgcgacacccttcatcgagtgcaatggcggcaagggacactgtttcttctacgaaact
ttgaccagtttctggctcgttacggtcgatcacacgcaacaattccgacgacccgaaatg
gaaaccatcaaagccggtaatttattgtctaaggtatcaagatgtaacgtttgtataaga
aattag

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