Entry |
|
Name |
(RefSeq) sodium channel protein Nach-like
|
KO |
K03440 | acid-sensing ion channel, other |
|
Organism |
cbri Culicoides brevitarsis
|
Brite |
KEGG Orthology (KO) [BR:cbri00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:cbri04040]
134832368
Ion channels [BR:cbri04040]
Ligand-gated channels
Acid-sensing ion channel (ASIC)
134832368
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
2:28177270..28180847
|
AA seq |
538 aa
MFKSDQLKSFFPRFKQLKRLCSSSSNSSNGEKLRDRLRITWKLLINKTACRRALASTFHP
YCRETSIHGLKHLFVPFAENELRGKQGKYLKLLSHIIWITSVICCAIFCLYLMVISLNNY
FEILTTTSIESINYPISEVPFPAVTFCSINKVYKPNTRMIQELAEKEGINHENYTNFLKS
LSKLTTLDLETDKTILEVEKKLLGANLTIAALMETVSQPCNRLLMRCQLRGDVVRCNRIF
RLITTYEGFCCSFNYYALRDHLELNSTGVSNTNMKLEGAGKYVGLTVQINSSTDAYVSPA
YPFYGTIIIIHQSSNYPEFSKSIDLVQPGQEVRLAVEPTVIESTENVERMPLSQRICLFP
EERETEMSDDYSFSNCLSECRANIVIKTCGCIPFYYPTFDENVSRIPMCQLKDSPCLHKN
RGLFQSIQVSTEEFLRQQAENGNTTRKNGLECDCPPTCSSVTFDVERFTGNITRHATLGN
HSIVHVYFSALTCIKYRRDIFMTWDTLLTYVWAALPSPFSKQFTFGPTSFTRSSTNNL |
NT seq |
1617 nt +upstreamnt +downstreamnt
atgttcaaatcggatcagctcaagtcattctttccacgtttcaagcaattaaaacgtctt
tgtagcagcagctctaattcctcaaatggggaaaaattaagagatcgcttgcgaataacg
tggaaattgttaattaacaagactgcatgtcgtcgtgccttggcaagtacttttcatcca
tattgtcgtgagacatcgatccacggattgaaacatcttttcgtgccatttgcggaaaat
gaattgcgtggaaagcaaggaaaatatcttaagcttctaagtcacataatttggatcaca
agcgtaatttgttgcgccattttttgtttgtatctcatggtaatttcgctcaataattac
tttgagatactcacaacaacctcaattgagtcaattaactacccaatttcggaagttccg
tttccagcagtgaccttttgcagcattaacaaggtttataaaccgaatacgaggatgatt
caagagttggctgaaaaagaaggaatcaatcacgaaaattacacaaattttttgaaatct
ttgtcaaaattgacaactttggatctggaaactgacaaaacgattctcgaggtagaaaaa
aagttactgggagcgaatttgacaattgcggctcttatggaaactgtttcccagccatgt
aatagactgttgatgcgatgtcagcttcgtggcgatgtcgtacgttgtaatagaattttt
cgtttaattacgacgtatgagggtttttgctgttcttttaattattatgccttgagggat
catttggaattaaactccactggcgtctcgaacaccaacatgaaactagagggcgctggc
aagtacgtaggtttaactgttcagatcaactcctcaactgatgcctatgtttcgcctgct
tatccgttttatggcactatcataatcatccatcaatcctcaaattaccccgagttctcg
aaaagtatcgatctcgttcaacccggacaagaagttcgtctcgcagttgaaccaactgtc
attgaaagcactgaaaatgttgaacgcatgcctcttagtcaacgaatctgcctttttcca
gaagaacgtgagacagaaatgtctgacgattacagtttctccaattgtttgtccgagtgt
cgagcgaatattgtgatcaaaacttgtggctgcattccattctactatccgacgttcgat
gaaaatgtttctcgaattccaatgtgtcagttaaaagactcgccttgccttcacaaaaat
agaggactctttcaaagtattcaagtgtcaacggaggaattcctgagacaacaagcggag
aacgggaacacaactcgtaaaaatggtctggaatgtgattgtcctcccacctgttcgtct
gtcacatttgatgtcgaacgcttcaccggtaatataacgagacacgccactctcggcaac
cactccattgttcatgtctacttcagtgccttgacttgcatcaaataccgtcgtgatatt
tttatgacttgggatacgttgctaacctatgtctgggcggctctaccatctccattctcg
aagcaatttacttttggacctacatcttttacacgcagctccacaaacaatttgtga |