Culicoides brevitarsis: 134832445
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Entry
134832445 CDS
T10947
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
cbri Culicoides brevitarsis
Pathway
cbri03022
Basal transcription factors
cbri03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
134832445
09124 Replication and repair
03420 Nucleotide excision repair
134832445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbri03021
]
134832445
03036 Chromosome and associated proteins [BR:
cbri03036
]
134832445
03400 DNA repair and recombination proteins [BR:
cbri03400
]
134832445
Enzymes [BR:
cbri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
134832445
Transcription machinery [BR:
cbri03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
134832445
Chromosome and associated proteins [BR:
cbri03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
134832445
DNA repair and recombination proteins [BR:
cbri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
134832445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
ResIII
DEAD
nSTAND3
AAA_11
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
134832445
NCBI-ProteinID:
XP_063702531
LinkDB
All DBs
Position
2:complement(30407317..30409844)
Genome browser
AA seq
762 aa
AA seq
DB search
MRLMVDGLEVYFPYEYIYPEQYAYMLELKKAIDAKGHCLLEMPSGTGKTTTLLSLIVAYM
LHNPGVVRKLIYCSRTVPEIEKVMAELKVLMDYYEKSAGQRPELLGVVLTSRKNLCIHSE
VSKEREGKLVDAKCYGLTASYVRERHNMDEATSVCQYYEWWSTEGKETLMPPGIYSIDDL
KQLGHARTWCPYFMTRQAIISAQIVVYSYHYLLDPKIAEVVSKEMSRESVIVFDEAHNID
NVCIDSMSVKINKRIVERSTAALGNLEKIVAEVKEDDHNRLTEEYQRLVQGLREANVARE
TDMVLANPVLPNDVLKEVVPGNIRNAEHFLGFLRRFIEYIKIRLRVRHVVQESPASFLKD
VQQKVCIERKPLKFCAERLASLMRTLEITELHEYSALTVITHFATLVSTYTQGFTIICEP
FDDKTPSVSNPILYFSCLDSSIAMRAVFQRFQTVVITSGTLSPMEMYPKILDFNPVVMAS
FTMTLARPCLLPMVVSRGNDQVAMSSKFETREDTAVIRNYGQLLVETAKAVPDGVVCFFT
SYLYLESVVASWYDQGIVDTLLKYKLLFIETQDSAETSYALMNYVKACECGRGAILLAVS
RGKVSEGVDFDHHLGRAVLMFGVPYVYTQSRVLKARLDFLRDMFQIRENDFLTFDALRHA
AQCVGRAIRGKTDYGIMIFADKRFARQDKRSKLPKWIQDHLSDNLCNLSTEEAIQLAKRW
LRQMAQPFCREDQLGTALLTLEQLQNMEKEKLDNQVQVVSRI
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgcggttaatggtagatggattggaagtttacttcccctacgagtacatttatcccgag
caatatgcctacatgttggaactaaagaaggcaattgacgcaaaagggcattgtttactc
gaaatgccttccggaactggcaaaaccaccacattgctctcgttgatcgtcgcttacatg
ttgcacaatcctggagtcgtgcgaaaactcatttactgcagtcgcaccgtgcccgaaatc
gaaaaagtcatggccgagttgaaagttctcatggattattacgaaaaatccgcaggacaa
cgacccgaattgctcggcgttgtgttgacatcgcgcaaaaacttgtgcattcacagcgag
gtgagcaaagaacgcgaaggaaaactcgtcgatgccaaatgttacggacttacagcgtca
tatgtgcgcgaaagacacaacatggatgaagctacgtccgtttgtcagtactacgaatgg
tggagtacggagggcaaggaaactctcatgccgcccggcatttacagcatcgacgatttg
aagcaactgggtcatgcgagaacatggtgtccctatttcatgacgcgacaagcgattatt
tcggcgcaaattgtcgtttacagctaccattacttgttggatccgaaaattgcggaagtt
gtgtcgaaagaaatgagtcgcgagtcggtaattgtgttcgatgaggcgcataacatcgat
aatgtgtgcatcgattcgatgagtgtcaaaattaacaagcgaattgtcgaacgaagtacc
gctgcgttgggcaatttggagaaaattgtcgccgaagtgaaggaagatgaccataatcga
cttacggaggagtatcaaagacttgttcagggcttgagggaagcaaatgtcgcacgagaa
accgatatggtattggccaatcccgtgttaccgaatgatgtgctgaaggaagttgttccc
gggaacatcagaaatgccgaacatttcctcggattcttgcgacgcttcatcgagtacatc
aaaattcggttgcgagtgcgacatgtcgtgcaagaaagtcccgcgagcttccttaaagac
gtccaacaaaaggtttgcatcgaaagaaagcccttaaaattctgtgcggaacgattagca
tcactcatgagaactttggagatcacagaattgcatgaatatagcgccctaacagttata
acgcactttgcgaccctcgtttcgacttacactcaaggatttacgataatttgtgagccc
tttgatgataaaacgccctccgtatcgaacccgattctgtattttagttgtttggactct
tcgattgcgatgcgggcggtttttcaacgcttccaaactgtcgttataacatcaggaact
ttatctccgatggaaatgtacccgaaaatcctggatttcaacccagttgtcatggcttcc
ttcactatgaccctcgccagaccgtgtttactgccgatggtggtttcgcgaggcaatgat
caagtcgcgatgtcatcaaaattcgaaacgagagaagataccgctgttattcggaattac
ggacaacttttagtggaaacagcgaaagcggtaccggatggcgtcgtttgtttcttcact
tcttacctgtatctcgagtctgtggtcgcttcgtggtacgatcaaggcatcgtcgataca
ttgctgaagtacaaattgctgtttatcgagacgcaagacagtgcggagacctcttatgcg
ctcatgaactacgttaaagcatgcgaatgtggcagaggagcaattttattggcagtttct
cgtggaaaagtctcggagggtgtcgattttgaccatcatcttggcagagcagtgctcatg
tttggcgttccttacgtttatactcaatcgcgagtactgaaggctcgtttagacttcctc
agagacatgttccagatacgggagaatgattttctgacatttgatgctttgcgacatgct
gcccaatgtgtggggagagctattcgaggcaaaactgactacggtatcatgatcttcgct
gataaacgatttgcacgtcaagacaagagaagtaagctcccaaagtggatccaggaccat
ctctcggataatttatgcaacttgagtactgaagaagcgattcagctggcgaaacgatgg
cttcgacagatggcgcaacccttttgccgtgaagatcaacttggcacggcgttacttacg
ctcgaacaactgcaaaatatggaaaaagaaaagttagataatcaagttcaagttgtttcg
aggatttaa
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integrated database retrieval system
