Culicoides brevitarsis: 134832487
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Entry
134832487 CDS
T10947
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
cbri Culicoides brevitarsis
Pathway
cbri03018
RNA degradation
cbri03040
Spliceosome
Brite
Messenger RNA biogenesis [BR:
cbri03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
134832487
mRNA degradation factors
5'-3' decay
Lsm complex
134832487
Spliceosome [BR:
cbri03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
134832487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF6943
SM-ATX
Motif
Other DBs
NCBI-GeneID:
134832487
NCBI-ProteinID:
XP_063702598
LinkDB
All DBs
Position
2:complement(5003430..5100281)
Genome browser
AA seq
127 aa
AA seq
DB search
MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDTWMNINLREVICTSKDGDKFWRMPECY
IRGSTIKYLRIPDEVIDMVKEDVQQKARNRTEVKNQRNQQNQNKNRNQQGNRPGLGSQGM
KGGMNKK
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atgcttccattgtctctattgaaaactgctcaatcccatcccatgttggtcgaactcaag
aacggcgaaacgtacaacgggcatctcgtgagttgcgacacttggatgaacatcaatttg
cgcgaagttatttgcacttcgaaagacggcgacaagttttggcgtatgcccgaatgttac
atccgcggcagcacgatcaaatatttgcgaattcccgacgaagtcatcgacatggtcaaa
gaagatgtacagcaaaaggctcgcaaccgtacggaagtgaaaaatcaacgaaatcagcaa
aatcagaacaaaaatcgaaaccaacagggaaatcgcccgggattgggatcgcaaggcatg
aaaggcggcatgaataaaaaataa
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