Culicoides brevitarsis: 134832489
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Entry
134832489 CDS
T10947
Name
(RefSeq) nuclear factor NF-kappa-B p110 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
cbri Culicoides brevitarsis
Pathway
cbri04620
Toll-like receptor signaling pathway
cbri04624
Toll and Imd signaling pathway
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
134832489
04624 Toll and Imd signaling pathway
134832489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbri03000
]
134832489
Transcription factors [BR:
cbri03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
134832489
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
RHD_DNA_bind
RHD_dimer
Ank
Ank_3
Ank_5
Ank_4
Tlde1_dom
Motif
Other DBs
NCBI-GeneID:
134832489
NCBI-ProteinID:
XP_063702600
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Position
2:33961555..33966472
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AA seq
800 aa
AA seq
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MFEVKVIYDMDKGEVNFNTPSSPESGYYASSPGSTMNMTPEYTGNAQNYPDFINVQGVSL
IAPKTPQNFFRFRYESEMHGTHGSLMGKDSSREIKTFPTVRLLGAELLPNNSTVRIRCTL
AQADRTNDEIPHSHKLVIKSGEQERYDPHFVEANFQNGYTVEFKGMGIIHTAKKDIIKEL
GAKLIRLKEFELERPLTDLERNIELTKVQKLNVKSMNLNQVCLCFEAFCYDVNFQKWIKI
CPGIYSEPINNIKSALTGELKICNYSTCVSPAAGDQEVYLLVEKVNRGDIKVRFFDNEGW
QDFARVDTVHHQYAIVMRTPPYKLQTITSPVQVWFHLYRTKDGCASMEREFTYKPNEIQE
IPGQKRKMRRVEEENIIPTPITELVSSTTTSTIDEEINLDFDLDYPLTPEDQEKVEQILE
DLEQGTLDFDSVPEKKEDTKSIKKVKDVHELLTEIIKKGDDNSFENILKLVKNHKMLQKL
VNMQDISFGGKRMTLLHLCCIYGRSTYLKELIDKSTDLNIVNIDGNNVLHLCVEFNKIDC
LKTLLSHKSKISMDNKNYKGWTPLHLAVKRDLLPIVRILVENGANLLSTRQTLTFETVLH
TAVEQKSLEMVKFILKITGTQLLNTFNGTDKTPLDILYDSTAKLDATQQEIARILLSLGG
WSSHINENESSDDHQRTYEEVESDEEDENVSNIEPPIENAFKEMSLNQSAPKNPIKFDKK
GKEDLCAILNGTNSWQQCAQLLDLENLCDIWGRQDNPSDCLLAYIEGCAFELQTVIDTLQ
MLQLTEAICVVDAMIARQLS
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaagtgaaagtcatttacgatatggacaagggagaagttaacttcaacactccc
tcgtcgccagaaagcggttattatgcatcgagtcccggcagtacgatgaacatgactccc
gaatacactggaaatgctcaaaattatcccgactttatcaatgtacaaggcgtctccctt
atcgcgccaaaaacgccacaaaacttctttcgttttcgttacgagtcagaaatgcatggc
acgcatggatccttaatgggaaaagattcttcacgtgaaatcaaaacatttcccacagtg
agacttttgggcgcggaactcctgccaaataattctacggttcgtattcgatgtactttg
gctcaagccgatcgcacgaacgatgaaattcctcattcgcacaaattggtgatcaaaagc
ggagaacaggagcgatatgatccccattttgtcgaagcaaattttcaaaatggatatacc
gtcgagttcaaaggtatgggcatcatccatacagcgaagaaagacatcattaaggaattg
ggcgctaaattgatacgtttgaaggagtttgagctggaaagaccgttgacggatttggaa
agaaacatagaactaaccaaagttcaaaagttgaatgtgaaatcgatgaatttgaatcaa
gtttgtttgtgttttgaagcattttgttatgatgtgaacttccaaaaatggatcaaaatt
tgtcctgggatttattccgagccgattaacaatatcaaaagtgccttaacaggcgaacta
aaaatctgtaactacagtacttgcgtttcgcccgccgctggagatcaagaagtctatctt
ctcgtggaaaaagtaaatcgtggcgacatcaaagttcgcttcttcgacaacgaaggatgg
caagattttgctcgcgtcgataccgtacatcatcaatatgcgatcgttatgcgaacgcct
ccatacaagctgcaaacgataacttctcctgtgcaagtttggtttcatctttatcgcaca
aaggacggttgcgcctcaatggaacgcgaattcacctacaaaccgaacgaaattcaagag
attccgggacagaaacgaaagatgcgacgagttgaagaggaaaatatcattccgacgccc
atcactgagttggtttcatcgacgacgacgtcaacaattgatgaagagatcaatttagat
tttgatttggattatccattgacgccggaagatcaagaaaaggttgaacaaatacttgaa
gacttggaacagggcacacttgactttgacagtgtaccggaaaagaaagaagatacaaaa
tccattaaaaaagtgaaagatgtgcatgagttacttacggaaataatcaaaaaaggagac
gataattcctttgaaaacatcctaaaattggtaaaaaatcacaagatgcttcaaaaattg
gtaaatatgcaagatatcagttttggcgggaaacgaatgacgctcctccatctttgttgt
atctatgggcgaagtacttatttgaaagaattgatcgataaaagtacggatttgaatatc
gtcaatatcgatggcaacaatgtcctccatttgtgtgtcgaattcaacaaaattgattgt
ttgaagacacttttgagccataaaagtaaaatttcaatggataataaaaactataaagga
tggactcccttgcatctggctgtcaaacgtgatttacttccaattgttcgtattttggtc
gaaaatggcgccaatttgttatcaacacgtcaaacattgacatttgaaacggttttgcat
acagctgttgaacaaaaatcccttgaaatggtgaaattcatactaaaaattaccggaaca
caattactcaacactttcaatggcacggataaaactcctcttgatattttgtacgactct
actgcgaaattggatgcgactcaacaagaaattgcacgaattttactttcacttggtggt
tggtcgagtcatatcaatgaaaatgagagttctgatgatcatcaaaggacgtacgaagaa
gttgaaagtgatgaggaagatgaaaatgtgtcaaatattgagccgccaatcgaaaatgcc
ttcaaagaaatgtctcttaatcaatcagcgccgaaaaatcccatcaaatttgacaaaaag
ggcaaagaggacctctgcgcgatcctaaatggcacaaattcgtggcaacaatgcgcacaa
ctgcttgacttggagaacctttgtgacatttggggtcgtcaagacaatccatcagactgt
ttattggcgtacattgagggctgtgcttttgaattgcaaacggtaattgatacgttgcaa
atgctccaactcaccgaagcaatttgcgttgtcgatgccatgatcgcacgacagttgagt
taa
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