Culicoides brevitarsis: 134832661
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Entry
134832661 CDS
T10947
Name
(RefSeq) uncharacterized protein LOC134832661 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cbri Culicoides brevitarsis
Pathway
cbri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134832661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbri03041
]
134832661
03009 Ribosome biogenesis [BR:
cbri03009
]
134832661
Enzymes [BR:
cbri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134832661
Spliceosome [BR:
cbri03041
]
Complex A
U1 snRNP components
U1 related factors
134832661
Complex B
134832661
Ribosome biogenesis [BR:
cbri03009
]
Eukaryotic type
Pre-60S particles
Helicases
134832661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
134832661
NCBI-ProteinID:
XP_063702836
LinkDB
All DBs
Position
2:23394262..23398628
Genome browser
AA seq
688 aa
AA seq
DB search
MYGRDNRNGGSSRSGGGSGFGGPRSRSGYGGDRGRDNGFKGKKDEPGANLQRIHWDTYNL
PSFQKNFFNPPEIVLRRPHADIQNFLNKHEITTSGRDCPNPTFHFEENGFPSFILDEFRK
QGFAQPTPIQSMAWPIALSGRDMVGIAQTGSGKTLAYVMPGLIHLKSQPKLQRFEGPIAL
ILAPTRELAQQIQEVADTFGRRMGVNNACVFGGAPKGPQIRDLENRAEIVIATPGRLIDF
LERNVTNLKRCTYLVLDEADRMLDMGFEPQIRKIMGQIRPDRQVLMFSATWPKEVRNLAE
EFLRDYVQINIGSLTLSANHNILQIVDVCEEHEKDQKLMKLLQEITREQDTKTIVFVETK
RGVDEVTRSINRFGFGWRACAIHGDKSQQERDYVLNQFRHAKNSILVATDVAARGLDVED
VKFVINFDYPSNSEDYVHRIGRTGRSNQTGTAYTLFTPQNGPKANDLINVLREANQVVNP
RLHEMSMSGYGKGRKFGRGGGQNHRNGGGNRMNTMQREQDRSRFNRAQNTGMNGRSRQNG
YGDNGTQNGGSRYGNGRSQNGGSNGGARDRSRSRQGTKDFGRSDYGRSNGSSSAVGNGRP
SRFDAPPPAVSGSTLRENGRYSRFSDNKATVPAASSDTSGWSSSGSVPLTETQSRREGVS
RFSTTTNHLKNYSTSSQGGVPRPLMSLN
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgtacggtcgtgacaatcgcaatggtggatcaagtagatcgggaggcggcagtggtttt
ggaggaccccgcagccgttctggatatggaggtgatcgtggccgtgacaacggattcaaa
ggcaagaaagacgaacctggagcaaacttgcaacgcattcactgggacacatacaatttg
ccatcttttcaaaagaattttttcaatccaccggaaatcgtactgagacgtccgcatgcc
gacattcaaaatttcttaaacaagcacgaaataacaacatctggacgtgactgtcctaat
cctacgttccatttcgaggaaaatggatttccgtcattcatcttggacgaattccgaaaa
caaggatttgcacaacccacgcccattcaatcaatggcttggccgatagctctcagcggt
cgagatatggtaggcatcgctcaaactggcagtggaaaaactttggcttacgttatgcca
ggtttgattcacttgaaaagtcagcctaagctacagcgcttcgaaggtccaattgcttta
atcttggctccaacacgagaattggcacaacaaattcaagaagtggcagatacttttgga
cgtcgcatgggagtaaataatgcgtgtgtcttcggcggagctccaaagggaccccaaatc
agagatttggaaaacagagctgaaatcgttattgcaacacctggtcgattaatcgacttt
ttagaacgaaatgtgactaacttgaaacgatgcacctatttggtcctcgatgaagccgat
cgtatgcttgacatgggctttgagcctcaaatccgaaaaattatgggtcaaattcgtcct
gatcgacaagtattaatgttttctgctacatggcccaaagaagttcgtaacttagctgaa
gaatttttgcgtgattatgttcagattaatataggatctctcacgctatcagccaatcac
aacattcttcagatcgtagatgtatgcgaagagcacgaaaaggatcaaaaactcatgaaa
ctattgcaagaaataacgcgtgaacaagataccaaaactatagtcttcgtagagacaaaa
cgtggcgtagatgaggtgacacggtctataaatcgatttggatttggctggcgtgcttgt
gccattcatggagacaaatctcaacaagaacgcgattatgtattgaaccaatttcgtcat
gccaagaattctatcttggtggcaactgatgttgcagctcgtgggcttgatgtggaagat
gtcaagtttgtcattaattttgactatccaagcaattcggaagattatgttcatagaatt
ggtcgtactggacgttctaatcaaactggaactgcctacaccttatttactcctcaaaat
ggacctaaagcaaatgacttgataaacgtcttgcgcgaagcaaatcaagttgttaatcct
aggttacacgaaatgtccatgagtggctatggaaaaggtcgtaaattcggtcgtggtgga
ggtcaaaaccaccgcaatggaggtggcaatcgtatgaataccatgcaaagagaacaggat
aggtcacggtttaatcgtgctcaaaataccggaatgaatggtagatctcgacaaaatggc
tacggagataatgggacacaaaacggtggctcgcgttatggaaatggacgttcacaaaac
ggtggcagtaacggtggggctcgagatcgttcacgcagtcgtcaaggaacaaaagatttc
ggtagaagtgattatggcagatctaatggtagctcctcagcagttggaaatggacgtcca
agtcgttttgatgcaccacctcccgctgtcagcggatcaactttaagagaaaatggaaga
tactcgagattctcagataataaagcaaccgtaccagctgcatcttcagacaccagtgga
tggagctcgtcaggtagtgtgccgttgacagagacgcaatcaagacgagaaggtgtttca
agatttagtacaacaacaaatcatttgaaaaattattcaacaagtagtcaaggaggcgtt
cctcgtccactaatgtcgttgaattag
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