Culicoides brevitarsis: 134832737
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Entry
134832737 CDS
T10947
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
cbri Culicoides brevitarsis
Pathway
cbri04120
Ubiquitin mediated proteolysis
cbri04137
Mitophagy - animal
cbri04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
134832737
04120 Ubiquitin mediated proteolysis
134832737
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
134832737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbri04131
]
134832737
04121 Ubiquitin system [BR:
cbri04121
]
134832737
03029 Mitochondrial biogenesis [BR:
cbri03029
]
134832737
Enzymes [BR:
cbri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
134832737
Membrane trafficking [BR:
cbri04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
134832737
Aggrephagy
Other aggrephagy associated proteins
134832737
Xenophagy
Other xenophagy associated proteins
134832737
Ubiquitin system [BR:
cbri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
134832737
Mitochondrial biogenesis [BR:
cbri03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
134832737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_14
IBR_2
zf-RING_12
ubiquitin
IBR_1
IBR
Rad60-SLD
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
134832737
NCBI-ProteinID:
XP_063702938
LinkDB
All DBs
Position
2:27744220..27747123
Genome browser
AA seq
488 aa
AA seq
DB search
MQFLLDFFRELIYAMIQLLSFGRKKIENSLFVYIKSNTGNTISVDLNPEWDIANVKEFIA
PKLGMSPQEVKIIFAGKELADTIHISECDLGQRSILHAVKSRPSVRDSNLKQKKLSFSLA
EEDEDPVSRSETPTAPLCETLIDLQLDSDERKLVKKDEMDRKKAHFYVHCSTCQELCNGK
LRVRCRECLSGAFTVHRDPENWADVLQPQRITGCCEGSETPCTDKSTGGPPFAEFYFKCA
KHVSQGEKDYAAPLTLIKTNLKDVPCLACGDLSDPVLVFPCKAGHTTCLECFRQYCSSRL
ADRQFIAHPDIGYTLACPTGCDESFIEEIHHFKLLTKEQYDRYQRFATEEYVLQAGGILC
PQPGCGMGLLPDPDCTRVVCQNGCGYVFCRRCLQGYHIGDCLPESTAISMPDSCRYAVDP
ERAAEARWDEASKVTIKVISKPCPKCRTPTERDGGCMHMVCTRSGCNFEWCWVCQIEWNR
DCMGNHWF
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttttacttgacttttttcgcgaattaatctacgccatgatccaacttttgtca
tttggacgcaaaaaaatcgaaaattccctgtttgtttacatcaaatccaacaccggcaac
acaatcagcgtcgatctcaatccggaatgggacattgcgaacgtaaaggagttcattgcg
ccgaaattgggcatgtcgccgcaggaagtgaaaattatctttgctggaaaggagcttgct
gacacgattcatatctcggagtgcgatttaggtcagagatctattttgcatgccgtaaaa
tcgcgtccttctgtcagagattccaatttaaagcagaaaaaattgagttttagtctcgcg
gaagaagatgaagatcctgttagtcgatcggaaacgccaactgcgccactttgcgagacc
ctaatcgacttgcaactcgactctgacgaacgaaaactcgtgaaaaaggacgaaatggac
cgaaaaaaggctcatttttacgtgcattgctccacttgtcaggagttatgtaatggcaag
ctgcgtgttcgatgtcgcgaatgccttagcggagcatttaccgttcatcgtgaccccgaa
aattgggcagatgtcctccaaccgcaacgaattaccgggtgttgtgagggttcggagacg
ccttgtacggacaaaagtacgggaggacccccgtttgcggaattttacttcaaatgtgcg
aaacatgtgtcgcagggagaaaaagactatgcagctcccttgacgttgatcaagacaaac
ttgaaggatgtcccgtgcttggcgtgcggcgacttgtcagacccggttttggtgtttcca
tgcaaagctgggcacacgacgtgccttgaatgctttcggcaatattgttcgtcgcggttg
gcggatcgacaatttatcgcgcatcccgatattggatatactttggcttgtccaacggga
tgtgatgagtcttttatcgaggaaattcatcattttaagttgctgacgaaggagcaatat
gatcggtatcagagatttgcgacggaagagtatgtcttgcaagctggcggcatcctctgc
cctcaaccaggctgcggcatgggcctccttcccgatcccgattgcactcgtgtcgtgtgt
caaaatggctgtggctacgttttttgtcgtcgttgcttgcaaggctaccacatcggagac
tgcctgcctgaatctacggcgatttccatgcccgacagctgccgatatgccgtcgatcca
gaacgcgctgccgaagctcgatgggacgaagcatcaaaagtaacgataaaagtcatctcg
aagccgtgtccaaagtgccgaacacccaccgaacgtgacggaggctgcatgcatatggtt
tgcacgcgatccggttgcaatttcgaatggtgttgggtctgccagatcgaatggaatcgc
gattgtatgggaaatcattggttctaa
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