Culicoides brevitarsis: 134832775
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Entry
134832775 CDS
T10947
Name
(RefSeq) DNA mismatch repair protein spellchecker 1
KO
K08735
DNA mismatch repair protein MSH2
Organism
cbri Culicoides brevitarsis
Pathway
cbri03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
134832775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbri03400
]
134832775
DNA repair and recombination proteins [BR:
cbri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
134832775
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
DUF6762
Motif
Other DBs
NCBI-GeneID:
134832775
NCBI-ProteinID:
XP_063702995
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All DBs
Position
2:21635289..21643266
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AA seq
878 aa
AA seq
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MPTYFGLDEAGVKAFHKFYKSLGDKPKTTVRFFDRSEFYTVHGEDAEFAAKVVFKSTAAL
KKAEISPDVLLTYVTLSKMNFEEFARHLLIVLHHRVEVYTSKGGAKNQEWNLEYRGSPGN
LLQFEDLLFSNREMVTSSSLISVFFKQSNNQKNLGVACLDNNRIFHIMEFVDDDFFSELE
AIAVLLSPKECLLPSTDGDYAKIQMILERNGILVTRRKSSDFKLETNVWTDYMNKLLHFE
KGQQQSVFALSESTLKLAMSALCAAIIYMDLVNDTSNHGTYRLEKINLNRFVHLDGAAVS
ALNLTPKVQAKSFTMKTNRWTSVLGVLDYCKTPQGHRLLLQWLKQPLRDLNAIKDRHDIV
ECFVNDPVSCQDIRESILKYIPDVMMLVTKLLRKKANLEDVYKLYVVATRIPSLLQILKD
LSNSTINSILYEPLKDVKNDLSGFKQMVLQILDMDGIDEGRYNIKAEFDPELKSMKEKME
AIENKMRRLLSKAMDDLGLQDQIKLDFVSHIGYHFRITLSNEKNLRKQTQYQTIDVVKGG
VRFKTTRLSELNSDYCELKEQYEEQQKSIVTEVVRIAAGYRVPFATLNSIIAQIDTFCSF
AKAAVSAPIQYVRPKICSEGSGRLYLKRVRHPCIEMQEDVNFIPNDIDFQSNVTNMQIIT
GPNCGGKSTYIRSAGVAVLLALIGSFVPCDEAEIPIVDSIMARVGADDNIRGLSTFMVEM
VETTGIIRSATEKSLVIIDELGRGTSTFEGCGIAFAIAEHLAKHVKCITLFATHFHEITE
LAQSVPTVKNFHMLAVTEDDSFTLLYQVAPGVVEKSFGIQVAKLADFPAQVVKDAQTLYE
DIDERVNFTVTDADLKSALEEMRGQLSENEMAFVLKQL
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgcctacttattttggtttagatgaggccggtgttaaagcctttcacaagttctacaaa
tcattgggagataaaccgaaaacgaccgtacgatttttcgaccgttccgaattctataca
gtacacggggaggatgccgaatttgccgctaaagttgttttcaagtcgacggccgctctt
aaaaaagccgagatctcaccggatgttctgctcacatatgtcacgctatctaaaatgaac
ttcgaagagtttgcaagacatttgttaattgttttacatcatagagtggaggtttatact
tcaaaaggtggcgcaaagaatcaagaatggaatttagaatatcgtggatctcctggaaat
ttattacaatttgaagatttgcttttttcaaatcgggagatggttacctcttcatcattg
atatcggttttctttaaacaatcaaataatcaaaagaacctcggagtcgcctgtctagat
aacaacaggatttttcacataatggaatttgtggacgatgattttttcagcgaacttgag
gcaattgctgttttgttgtctccaaaagaatgcttactcccttcaacagatggagattat
gcaaagatccaaatgattcttgaacggaatgggatactggttactcgtcgcaaaagttca
gatttcaagttagagacaaatgtatggaccgattatatgaacaaattacttcattttgaa
aaaggacagcaacaaagcgtttttgcgttgtctgaatctactttaaaattagcaatgtcc
gctttgtgtgccgctatcatttacatggatctggttaatgatacatcaaaccatggaaca
taccgcttggaaaagataaatttgaatcgttttgtgcatttagatggggcagctgtctcg
gctcttaatcttaccccgaaagtacaagccaaatctttcacgatgaaaacaaatcgatgg
acaagtgttttgggagtattagattactgcaagaccccacaagggcatcgacttttgcta
caatggcttaagcaaccactgcgtgatttgaatgctattaaggacagacatgacattgtt
gaatgttttgtaaatgatccagtctcttgtcaggatataagagaatccattctaaagtac
attccagacgttatgatgctcgttacaaaattgcttcgcaaaaaggcgaatctcgaagac
gtttacaaactctatgttgtcgcaactcggataccgtctcttttacaaattcttaaagat
ttaagtaattcaacaattaatagtatcttatatgagccactaaaggatgtcaaaaacgat
ttatctggtttcaaacaaatggtacttcaaatcctagatatggacggtatcgatgaggga
cggtacaatattaaggcagaattcgatccagagctcaaaagcatgaaagaaaaaatggaa
gcaatcgagaataaaatgcgtcgtttgctgtcaaaagcaatggatgatttaggtttgcaa
gaccagatcaaactggattttgtatcacacattggttaccactttcgtattacactttcc
aatgaaaaaaacctgcggaaacagacacaatatcaaacgatcgatgtcgttaaaggcggt
gtacgattcaaaaccacacgtttaagtgagctgaattctgattattgtgagcttaaagaa
caatacgaagaacaacagaaatcgattgtaacggaagtagtacgaattgctgctggatac
agggttccatttgcaacactcaactctatcattgctcaaatcgatacattttgttcattt
gcgaaagctgccgtatccgcgccgattcaatatgtacgtccaaaaatatgttcagagggc
tccgggcgtctttatttaaaaagagtccgtcatccatgcatcgaaatgcaagaagacgtc
aactttatcccgaacgatattgactttcaatccaacgtaacaaacatgcaaattattacg
ggacctaattgcggcggcaaaagcacatatatcagatcagctggtgtagctgtccttttg
gccttaatcggatcatttgttccttgtgatgaagctgaaattccgatagttgacagtatc
atggccagagttggagctgatgataacattcgaggtctcagtacgtttatggtggaaatg
gttgaaacaacaggaatcatacggtctgcaaccgagaaatccttagtgattattgatgag
ctaggtcgcggtacgagtacatttgaaggatgtggaattgcttttgccatagcagagcac
ctggctaaacatgtgaagtgtattaccttatttgctacacactttcatgaaattacagag
ttagcacaatccgttcccactgtcaagaatttccatatgttggccgttacagaagatgat
agctttacattgctatatcaagtagctccaggagtagtggaaaagagtttcgggattcaa
gtagccaaattggcggattttcctgcgcaagttgtgaaagatgcacagactttgtatgaa
gatattgacgaaagagtcaattttactgtcactgatgctgatttgaaatctgctttagaa
gagatgcgtggacagttgagtgaaaatgaaatggcatttgttttgaaacaattgtaa
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