Culicoides brevitarsis: 134833161
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Entry
134833161 CDS
T10947
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
cbri Culicoides brevitarsis
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbri03021
]
134833161
03036 Chromosome and associated proteins [BR:
cbri03036
]
134833161
Transcription machinery [BR:
cbri03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
134833161
Chromosome and associated proteins [BR:
cbri03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
134833161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
S1
Spt6_S1
SH2
HHH_9
Tex_YqgF
S1_RRP5
OB_RRP5_4th
HHH_3
Tex_N
Motif
Other DBs
NCBI-GeneID:
134833161
NCBI-ProteinID:
XP_063703464
LinkDB
All DBs
Position
3:32203559..32211655
Genome browser
AA seq
1878 aa
AA seq
DB search
MDFLDSEAEESDQSEEEDLEPQERKKLKKMKQMVDSSEEEDEDDGEEVKDLIDDNPIEEE
DSGEDSDEGPSKRKKSDDEDELDDRLEDEDYDLIEENLGVKVQRKRFKRLRKIQDEESDQ
EEADESLNREVIADQLFQGSDDEEERQSERSHRPVENLENLDDSGEEESDADDFIVDDDG
VPLTEKKKKKKRPMFTDASLQEGQDIFGVDFDFEEFEKYDDEEEYEDESEPDEYEEDGEE
REKRPKKAARKRINKKSIFDIYEPSELKRGHFTDLDNEIRKTDIPERMQLREVPITAVPE
GSNELDEEADWIYKQAFCKPPISQQAEKRQQNNDSWDTNQQTKKPLSTIPKIKQALDFMR
NQQLEVPFIAFYRKEYVQPELNITDLWKVYKWDARWCQLFTRKRRLVELFKKMQEYQTDK
LMANPDAPIPDDVLVIKDDDIDNVYCAQTPEELKDIHNHFLLYHAHEIPNMREAWRRKEK
ERKKLEKIAARRKELENLEEGAEPPPPIQSDDEGIADTEDLDQLKIKMDSGPYSMCRKAG
LASLAKKFGLRPEHYAENLRDSYQRHEVDQEQLDPTEVAKQYISPKFGTVEEVLDAAKFM
VARQLSREPLLRKVLRETYFERAKLSVTPTKKGMKEIDENHNCYTMKYLLNKPVRELTGD
QFLKLHIAENDKLLTMTIHERIDTSNSQSFLEEAKSLYSRDEFAKSVQDWNALRAECVEL
ALTKMVLPDLRKELHAILLNEAKEFVLKACCKKLYNWIKIAPYSVNFQDEDEYDWDTSKG
VRVMGVAYVPDYSQAAFCAISAPDGDITDYLRVPHILKRKNAHREDERELKQNDLDSLTD
FIRSKKPHVIVVGGESREAIMIQQDLRECVKKLTEDEQFPEINVEIVDNELAKIYANSNK
GTSDFREYPPLLRQAVSLARKLQDPLVEYSQLCTSDEEILCLRYHTLQEQLNKEELLENL
YLEFINRTNEIGVDVNLAVQNPLTQNLVQFICGLGPRKGQALIKVLKQTNQRLENRTQLV
TACHMGPKVFINCSGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAVDALEYDD
EDANPAGALEEILEAPERLKDLDLDAFAEELERQGFGNKSITLYDIRAELNSRYKDLRVP
YQPLNSEEIFDVLTKETPETFYVGKLVLVTVCGISHKKPQADQFENVTPVRNEETGLWQC
PFCLKNDFHELSEVWHHFDSGDCAGQATGVKVRLDNGLNGYIHIKNLSDSHVKNPEERVK
MGQAIHVRIIKIDVERFSVDCTSKSSDLADRNNEWRPRKDQYYDQAAEDRDLKREEDSKK
QKDRQMYVKRVIAHSAFMNKSYAEALKIMATKEQGEVIIRPSSKGSDHLTVTWKVADDVY
QHIDVREEGKENAFSLGRSLWIGSEEFEDLDEIIARHINPMAGYARDLLSYKYYLDTQGG
MKDKAEEALREEKRKNPNKIHYFISVSKNYPGKFLLSYLPRTRTRHEYITVTPDGFRYRQ
QIFDSINTLLKWFKEHYKDPLPAATPHTNTPRGGSTSLSLRSPYTVGNSSINNDAIRKVA
QNMPSSMLHSLSQVTNTTPQNQYTPGTHGGQSSYTINTPYTPSGQTPYINMTPYATPHAS
QTPRYGQTTPSLGQKSPFLHPGLPLSAQRVGASPYQQSPSSHSRGYAQAAENSSWERASE
AWGAGSRSQMGGQRSFGAPQKEYDGRGYNNAPRGGGMSRPGSGNRYDNRPTGYGAHAAAG
GPKDRYDSGFRRNDRGGGGNRGGSRFDRNDRGNRPSRFSNNSRNDYNPPATSQQSNRDDD
DNWDNEVPAPSRANSGSTPRNDYQSSSSKSRNDADENWDDDLTPAKSPAVHSVSTPKTNT
SPKSMTMSGDQTPLWDED
NT seq
5637 nt
NT seq
+upstream
nt +downstream
nt
atggatttcttagattcagaggcagaagaaagcgatcaatccgaggaggaagacttggaa
ccgcaagaacgcaagaagctcaaaaagatgaaacaaatggtcgacagttcggaggaagaa
gacgaagacgatggggaagaagtcaaggatcttattgacgataatcccatcgaggaagag
gattcaggagaagattctgatgagggtccgagtaaacgtaagaagagcgatgacgaggat
gaactagatgatcgattggaagacgaggattacgatcttattgaggaaaatttgggtgta
aaagttcaaagaaaacggttcaaacgtcttcgaaaaatccaagatgaagagagtgatcaa
gaagaagctgatgagagtttgaaccgagaagtcattgcggatcaacttttccaaggatct
gatgatgaggaagaacgtcaatccgaacgcagccatcgcccagttgaaaacttggaaaac
ctcgacgactcaggcgaagaagaatccgatgccgatgatttcatcgtcgacgacgacgga
gtccccttaactgagaaaaagaagaagaaaaagcgtcccatgttcacggatgcctccttg
caagaaggtcaggacattttcggcgtggatttcgactttgaagaattcgaaaaatacgac
gacgaagaagaatatgaagacgaatcggaacccgatgagtacgaggaagacggagaagag
cgcgaaaaacgccccaaaaaagcagctcggaaacgcatcaataaaaaatccatttttgac
atttacgaaccgagcgaattgaaacgcgggcatttcactgacttggataatgagattcgt
aaaactgacatccccgaacggatgcaattgcgcgaagtacccataacagcagtgcctgaa
ggctccaacgaactcgacgaagaggcagattggatttacaaacaggcattttgcaagccg
ccaatttcgcagcaagcggaaaagcgtcagcaaaacaacgactcgtgggatacaaatcaa
caaacgaagaaacccctttcaacaatcccgaaaatcaagcaagcattggatttcatgcga
aaccaacaactcgaggttccttttatcgctttttaccgcaaagaatacgtgcaacccgag
ctaaatatcaccgatttatggaaagtttacaaatgggacgcccgctggtgtcaacttttc
acgcgaaaacgccgcctcgtcgaacttttcaagaaaatgcaagaatatcaaacggacaaa
ttgatggcaaatcccgatgcccccatcccggatgacgttcttgtcatcaaagacgacgac
attgacaacgtttattgcgcccaaacacccgaagagctcaaggacatccataatcacttt
ctgctgtatcacgcgcacgaaatcccgaacatgcgcgaagcgtggcgtcgcaaggaaaag
gaacgtaaaaagttggaaaaaatcgccgcgcgtcgtaaggagctggaaaacttggaagaa
ggtgctgaaccgcctccgccaatccaatctgacgacgaaggcatcgccgacaccgaagat
ttggaccaactgaagataaaaatggattctggaccttattccatgtgtcgcaaagccgga
ttagcttcgttggcgaaaaaattcggtttgcgcccggaacattacgccgaaaatttgcgc
gatagttatcagagacacgaagttgaccaagaacaactcgatccgacggaagtagcgaag
caatatatttcaccgaaattcggtacggtcgaagaagtcctcgacgcagcgaaatttatg
gttgcgagacaactctcgagagaacctttgttacgaaaagtgcttcgcgaaacgtatttt
gagcgcgcaaaactgtccgtgacccccacaaagaagggaatgaaagaaattgacgaaaat
cacaattgttacacgatgaaatatttgctgaacaaaccggtacgcgaactcacaggcgac
caattcctaaaattgcacattgctgaaaacgataaattgctcacgatgacgatccatgaa
agaattgacaccagcaactcccaaagtttcctcgaagaagcaaaatctctctacagtcgt
gatgaattcgccaaaagtgtgcaagattggaacgcattacgagcggaatgtgtcgaattg
gctctcacaaagatggttttaccggatttacggaaggagcttcatgcgattttactcaac
gaagcaaaggaatttgtactgaaagcgtgttgcaaaaaactgtacaactggataaaaatt
gccccgtattccgttaattttcaagacgaagacgaatatgattgggatacatcgaaagga
gttcgtgtcatgggtgtcgcttatgtaccggattactcccaagccgctttttgtgcgatt
tcggcgccagatggagatatcacggattatttaagggttccgcatatcttaaaacgaaaa
aatgctcatcgcgaggacgaacgagagctaaaacaaaatgacttggattccctcacagac
ttcatccgcagcaaaaaacctcatgtaatcgtggttggaggcgaatcccgcgaagcaata
atgattcaacaagatctgagggaatgcgtgaagaaattaactgaagacgagcagttcccg
gaaataaatgtagaaattgtggacaatgaacttgccaaaatttacgctaattcgaacaaa
ggcacgtcagattttcgcgaatatccgcccctactacgtcaagccgtgtcgttggctcga
aaattgcaagatccgctcgtcgaatattcccaactttgcacgtcggatgaggaaattctc
tgtttgcggtatcacacgttgcaggaacagctcaacaaggaagaacttttggaaaatttg
tatttggaattcataaatcgcactaatgagatcggggttgacgttaatttggcagttcag
aaccccctgacgcaaaatttggtgcaatttatttgcggtttgggtccgcgaaagggacag
gctctgataaaagtgctcaaacagacgaatcagcggttggaaaatcgaacgcaactcgtc
acggcgtgtcatatgggcccaaaagtgttcatcaattgttcgggtttcatcaaaatcgac
acaaattcactcggggacagtaccgaggcttatgttgaagtgctggatgggtctcgagta
cacccggaaacgtatgaatgggcaagaaaaatggctgtggatgcgttggagtatgatgat
gaagatgcaaatcccgctggagcgctcgaggaaatcctcgaagcaccggaaaggttgaaa
gatttggatttggatgcatttgctgaggaactggagcgtcaaggcttcggaaataagagc
attacgctgtacgacattcgtgcggaactcaattcgcgctataaggaccttcgtgtgccg
taccaaccactaaattcggaggagattttcgatgttttgacgaaagaaacgcccgaaacg
ttctacgttggcaaacttgtgcttgtcactgtatgcggaataagtcataaaaagccccaa
gcagatcaattcgagaatgttacaccggtcaggaatgaagaaacgggattgtggcaatgt
ccgttctgcctgaaaaatgatttccacgaactttcggaggtttggcatcatttcgactcc
ggagattgtgcgggacaagcgacaggcgtcaaggtacgactcgataacggcttgaacgga
tacattcacatcaaaaatttgtccgattcgcatgtcaaaaatcccgaggaacgggtcaaa
atgggtcaagccattcatgtgcgcatcataaaaatcgacgtggagcgttttagtgtcgat
tgcacgtcaaaaagttccgatttggccgatcgcaataatgaatggcgcccgaggaaggat
cagtattacgatcaggcagccgaagatcgtgacctgaagcgcgaagaagactcgaaaaag
caaaaagatcgtcaaatgtatgtgaaacgagtgattgcccattcagcttttatgaacaaa
tcgtacgcggaagcacttaaaattatggcaaccaaggagcagggcgaagtaattattcgt
ccgtcgagtaagggatcggatcatttgaccgtgacgtggaaagtagcagatgacgtttat
caacatatcgatgttcgtgaggaaggcaaggagaatgcatttagcttgggacgctctttg
tggatcggaagtgaggaatttgaggatttggatgaaattatcgcgcgacatattaatccg
atggcgggttatgcgcgtgatttgttgtcgtacaagtattatttggacacgcaaggcggc
atgaaagacaaggcggaggaagcgttgcgcgaggaaaagcgaaaaaatcccaacaaaatc
cattattttattagtgtatcgaaaaattaccccggaaaattccttttgtcgtatctgccg
aggacacggacacgacatgaatatattacggtgacgcccgatgggttcagatatcgacaa
caaatatttgattcgattaatacgttgctgaaatggttcaaagagcattataaggatccc
ctgccggcagcaacgccgcatacaaatacgccacgaggcggttcgacgtcgctcagcttg
cgatcgccttatactgtgggcaatagttccatcaataacgacgcaatccgtaaggtagct
caaaatatgccatcgagcatgttacattcgttatctcaggtcacaaatacgacaccacaa
aaccaatacactccaggcacgcatggcggtcaaagctcctacacaattaacaccccatac
actccgagtggacaaactccgtatataaatatgactccttatgcaactcctcatgcatcg
cagacgccccgttatggtcaaacgacgccaagtctcggacaaaaaagtcctttcttgcat
ccgggactaccgttgtcggcacaacgcgttggcgcatcgccctatcaacagtctccgtcg
tcgcacagtcgaggatatgctcaagctgcggaaaattcgagttgggaacgtgcctcggaa
gcatggggcgcagggtctcgcagtcaaatgggcgggcaaagatcgtttggagcgccgcaa
aaggagtatgatgggcgaggatacaataatgcaccaagaggcggaggcatgtctcgtccc
ggctccggaaatcgttacgacaatcgcccaacaggctacggcgcccatgcagcagctggc
ggaccaaaagatcgctacgattctggattccgacgcaatgatcgcggcggaggcggaaat
cggggaggctctcgcttcgatcgcaacgacagaggaaatcgcccaagtcgcttcagtaac
aattcgcgcaacgattacaatccgccagccacgtcgcagcagtcaaatcgcgatgacgac
gacaattgggacaacgaggtacccgccccgagtcgtgcaaattccggatcgacaccgcga
aacgactatcagagcagcagcagcaagagtcgcaacgatgccgacgagaattgggatgac
gacttgacgccggcaaagagtcccgcggtgcatagtgtgagcacgccaaagacaaatacg
tcgcccaaatcgatgacaatgagcggagatcagaccccgttgtgggacgaggactaa
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