KEGG   Culicoides brevitarsis: 134833217
Entry
134833217         CDS       T10947                                 
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
  KO
K17890  autophagy-related protein 16-1
Organism
cbri  Culicoides brevitarsis
Pathway
cbri04136  Autophagy - other
cbri04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:cbri00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    134833217
   04136 Autophagy - other
    134833217
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cbri04131]
    134833217
   03029 Mitochondrial biogenesis [BR:cbri03029]
    134833217
Membrane trafficking [BR:cbri04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    134833217
 Others
  Specific organelles associated proteins
   Auto phagosome
    134833217
Mitochondrial biogenesis [BR:cbri03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    134833217
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 ATG16 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd EIF3I WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_Aladin ANAPC4_WD40 Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_EML NBCH_WD40 Beta-prop_DCAF4 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_ACSF4 Beta-prop_SCAP Beta-prop_VPS8 Beta-prop_IFT140_1st WD40_like Beta-prop_HPS5 NET2A Beta-prop_SPT8 IP_trans Lebercilin RPW8
Other DBs
NCBI-GeneID: 134833217
NCBI-ProteinID: XP_063703529
LinkDB
Position
3:complement(11844699..11858337)
AA seq 567 aa
MNPNDKKWRNLIVDRLRDRNRTESSSFNALIQCNNRLFDSNSQLSAENLRLVVENEKIRQ
GARGSLHGSRDSSLDNARVQNLEKKLLAQQEELTELHKRKGEHSQQIIDLNKRVQELLKV
IADKDATLADQKSLNQKLRAEVQMLTSSIQELKNLNTCLRDEHTALQLAFASNEEKLRKA
QDDNRVLVEKIGQIQKQMAEKMNDENESFIRKMSERMRRELEDAARDGSRRSNSPVIQDR
GSIGELFTRGIDAIYIDALPNGVQMKFDSHDGEVNAVRWNPIEQIVATGGADRKVKLWDV
SKGMCDPKGTLVGCNAGVNSVDFDSTGTMIIGTSNDYASRIWTLSDQRLRHTLTGHSGKV
MAAKFMGEPSKVVTGSHDRTLKVWDLRNKACIETKFAGSSCNDLVITDGSGSTIISGHFD
KKIRFWDTRTDCSANDIVLNGKITSLDLSKDYKYLLCCTRDDTIKLLDLRRNQIITTYSH
DNFKVGCDWARVCFSPDGSKIAAGGADGNVYVWNVNGTLETTLKDHSSGGFFIRSSSITA
VSWHPHFPVLASVDRAKKCVIWSSTTV
NT seq 1704 nt   +upstreamnt  +downstreamnt
atgaacccaaatgacaaaaaatggcgaaatttaatagttgatcgtttacgggaccgcaac
cggaccgaatcatcgagcttcaacgcgttaatccagtgcaataatcgtctcttcgactcg
aacagccagctgagtgcggaaaatctccgtcttgtcgtggaaaatgagaaaattcgtcag
ggagcgcggggatcgttgcatgggtcgcgcgacagctccttggacaatgccagagtgcaa
aatttggagaaaaaattgctcgcacagcaggaagagctcacggaactgcataaacgcaaa
ggagagcactcgcaacaaataattgacttgaataaacgcgtgcaggaactgctaaaagtc
atcgcggacaaagatgcgacgctggcagaccaaaaatcgctgaaccaaaagttgcgtgcg
gaagtccagatgctcacgtcgagcatccaggagctgaaaaacttgaatacttgcctgcgg
gacgaacatactgccttgcaacttgcatttgcgtcgaacgaggagaagctccggaaggcg
caggacgacaaccgagtgctcgtcgagaaaattgggcaaatccagaaacaaatggcggaa
aaaatgaacgacgagaatgaaagttttatacgtaaaatgtcggaacgcatgcgacgcgaa
ctcgaagatgccgcccgtgacggttcccgacgctccaatagtcccgtaattcaggatcgc
ggcagcattggggaactttttacgcgcggcattgacgccatttatatcgatgccttgccc
aatggcgttcaaatgaagttcgattcgcacgatggcgaagtaaatgccgtgcgttggaac
ccaattgagcaaatagtcgccacgggaggtgctgatcgcaaggtaaagctgtgggatgtg
agcaagggaatgtgcgatccaaagggaactctcgttgggtgcaacgcgggagtaaatagt
gtagattttgactcgacaggtaccatgattattggcacgtcgaacgattatgctagtcga
atatggactttgagtgaccaacgacttcggcatacgctgacaggtcacagtgggaaagtt
atggcagcaaaatttatgggagaaccatcaaaagttgtcactggcagtcatgatcgcacg
ttaaaagtgtgggatttgcgtaacaaagcatgcatcgaaacaaagtttgctgggtctagt
tgcaatgatctcgtcatcaccgatggatcgggctccacaataatctcagggcattttgat
aagaagattagattttgggatacgcggacagactgttccgcgaacgacattgtgttaaat
gggaaaattacatcactggacctctcgaaggactataaatatttgttgtgctgtacgcgc
gacgatactattaaactactcgatttgcgtcgcaatcagataattacgacgtatagccac
gataatttcaaggtaggatgtgattgggcgagggtttgtttcagcccagatggctcgaaa
atcgcagcagggggcgctgatgggaatgtttacgtttggaatgtaaatggaacgctggag
acgacgttgaaggatcattcgtccgggggctttttcattcgcagttcttccatcactgcc
gttagttggcatccacattttccggtgctcgcaagtgtagacagagccaaaaagtgcgtg
atatggtcaagcacgacagtttaa

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