KEGG   Culicoides brevitarsis: 134833229
Entry
134833229         CDS       T10947                                 
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
cbri  Culicoides brevitarsis
Pathway
cbri03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cbri00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    134833229
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbri03019]
    134833229
Messenger RNA biogenesis [BR:cbri03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     134833229
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     134833229
SSDB
Motif
Pfam: ECR1_N EXOSC1 RRP4_S1
Other DBs
NCBI-GeneID: 134833229
NCBI-ProteinID: XP_063703552
LinkDB
Position
3:complement(29755614..29756427)
AA seq 213 aa
MVANTQMEELICIPGQRICPLTEETISGEGTYERGGYIYSNLAGVLKFRKSEKITYIDVI
SPKAKTILPIPGDVVTCRVQVVNQRFAKCLIIGIGDVVLTRHLRGILRKEDVRATDKDRV
EIYKCFRPGDIILAKVLPQTELHTYQLTTAENELGVVVATYRGQDVPMTPIGWTEMQCPV
TLAKEPRKVARLMTENQLQTLLKTEVKDEKMEE
NT seq 642 nt   +upstreamnt  +downstreamnt
atggtcgctaacacacaaatggaagaacttatttgtattcctgggcaacgaatttgtcca
ttgacggaggaaacgatatctggggaaggcacttacgaacgcggcggatatatttactcc
aacttggcgggtgttttaaagtttcgcaagtcagaaaagatcacttacatcgacgtcatt
tcgccaaaagcgaagacaattctaccaattccgggtgacgtcgttacctgtcgcgtgcaa
gttgtgaaccaaagatttgccaaatgtctcataattggcatcggagatgtcgtgttaacg
cggcatttgcgtggaattttgcgaaaagaagatgtgagggcgacagacaaggatcgcgtt
gaaatttacaagtgtttcagaccgggagatataattttagcgaaagttttgccacaaacg
gagctccatacgtatcaattgacgacggcggaaaacgagttgggagttgttgtggcgacg
tatcgaggacaagatgtgcccatgacgccaattggatggacggagatgcagtgcccggtg
acgttggcgaaggaaccgcgcaaagtggcgcgacttatgacggaaaatcagctgcaaacg
ctgctgaagactgaagttaaagacgaaaagatggaggaataa

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