KEGG   Culicoides brevitarsis: 134833236
Entry
134833236         CDS       T10947                                 
Name
(RefSeq) WD repeat-containing protein 48 homolog
  KO
K15361  WD repeat-containing protein 48
Organism
cbri  Culicoides brevitarsis
Pathway
cbri03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cbri00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    134833236
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbri03400]
    134833236
DNA repair and recombination proteins [BR:cbri03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     134833236
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40 WD40_CDC20-Fz DUF3337 WD40_Prp19 Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st Beta-prop_SCAP NBCH_WD40 Beta-prop_WDR41 Beta-prop_Aladin Beta-prop_EIPR1 Beta-prop_DCAF12 ANAPC4_WD40 WDR54 WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_NWD2_C WD_LRWD1 Beta-prop_IFT140_1st Beta-prop_Nup120_160 Beta-prop_DCAF4 Beta-prop_HPS5 WD40_RFWD3 Beta-prop_ACSF4 Beta-prop_NUP159_NUP214 WD40_like Ge1_WD40 Beta-prop_VPS8
Other DBs
NCBI-GeneID: 134833236
NCBI-ProteinID: XP_063703562
LinkDB
Position
3:complement(13924270..13926732)
AA seq 666 aa
MHSRKKVQVSFVIRDAEEKKHRNGVNALQLDHITGRMYSAGRDAIIRVWNSKQSSDNYIQ
SMEHHNDWVNDIVLCCGGRYLISASCDTTVKVWNAQKGFCMSTLKTHRDYVQALAYAKDR
EQVASAGLDKEIFLWDVNTLTALTASNNTVTTSNLHGSRDSIYSLAMNPPGTVIVSGSTE
NTLRVWDPRTCNRLMKLKGHTENIKALVVSPDGTHVVSGSSDGTIKLWSLGEQTCIQTLH
VHDEGVWSLLMTENFSHVISGSRDKKIVMTELRNPSNSVVICEENAPVLSMCYNIDHTGI
WATTWNSDIRCWKIPRIDKGLYNGAGAGDNPTNFAKNQEMSFIEGGSAIKKYTVLNDKRF
MLTQDSEQNVAVYDVLKVVKSEDLGKVNYEEEIEKRNQTVFVPNWFTVDLKTGMPTIVLG
QDEVDCFAAWVSAEAGLPEQPELGSDLKVNYGQLLLQALFEHWRPHNLMPAELKNEVRGN
EYFKIPLHTPIILSEVGGRTLCRLLVRDAAGETDSVLLQDTVPSFVTDVVIERATPKFIK
IPFYLLPHSSMAKSINMKKDRLIANEFIQCRKVCEHVLEKILGPEMATVNSGSGNVAGAG
NNSNSSQGSQNEQNLTEGQTAAEKKIELLCNDVVCDPSMDLRTVKQFIWKCSSDLTFLYK
MKSSVT
NT seq 2001 nt   +upstreamnt  +downstreamnt
atgcacagccgaaaaaaagtccaggtctcctttgtgatccgcgatgccgaagaaaaaaaa
caccgcaacggcgtcaatgccttgcagcttgaccacatcacgggccggatgtacagcgcc
gggcgcgacgccataattcgcgtttggaactcaaaacaatcgtcggacaactacattcag
agcatggagcatcacaacgactgggtgaacgacattgttctgtgctgcggcggacgttat
ttgatctcggcgagttgcgatacaaccgtcaaagtctggaatgcccaaaagggattttgc
atgtcgactttgaagacgcatcgggactacgtgcaagcgctggcatatgcaaaagatcgc
gaacaagtcgccagtgccggtttagacaaagaaattttcctgtgggacgtcaatacgtta
acggccctgacagccagtaacaacacagtgaccacgagtaaccttcatgggtcccgcgat
tcgatttattcgctcgctatgaaccccccgggcaccgtaattgtcagcggatcgacagaa
aatacgcttcgggtgtgggatccgcgaacctgtaaccgtttgatgaagctcaaaggacac
acggagaacataaaagcacttgtggtatcgccagatggcacgcatgtcgtctccggaagc
tctgacggcaccattaaactctggagtttgggcgaacaaacgtgcattcaaacgttacat
gtgcacgacgaaggagtttggtccctgctgatgaccgaaaacttttctcacgtcatttcc
ggcagtcgcgacaagaaaattgtcatgactgagttaagaaatccctcaaatagcgtcgta
atttgcgaggaaaatgctccggtactgagtatgtgttacaatatcgatcacacgggcatc
tgggccactacctggaactcggatattcgttgttggaagatcccccgtatagataaaggg
ctctataatggcgccggagcgggcgataaccccacaaattttgccaaaaaccaagaaatg
tcgttcattgagggcggaagtgccatcaagaagtacaccgtgctcaatgacaagcgattt
atgttgacgcaggactcggaacagaacgttgccgtctatgacgtactcaaagtcgtcaaa
tctgaggacttgggaaaggtaaattacgaagaagagatcgaaaaacgcaatcaaacggtt
tttgtgcccaattggttcacggtggatctcaaaacgggcatgccgacgatcgtgttgggg
caagatgaggtcgattgttttgccgcttgggtctcggcggaagcaggattgcccgaacaa
cctgaactaggctccgatttgaaagttaattacgggcaacttttgctccaagcacttttt
gagcattggagaccccataacctgatgccggcagagctcaaaaacgaagttaggggcaac
gaatatttcaaaatcccgctgcataccccgattattctcagtgaagttgggggcagaaca
ctttgtcgcctgttagttcgtgatgcagctggagaaacggactcggtattgcttcaggac
acagtcccgagtttcgtgacagatgtcgttattgaacgagcgacacctaaattcatcaaa
attcccttttacttgctgccgcattcgtcgatggcaaagtcgatcaatatgaaaaaagac
cgtttaatcgctaacgagttcattcagtgtcgaaaggtgtgcgaacatgtgttggagaaa
atcttgggaccggaaatggcgacagtcaatagcggaagtggaaatgtcgcgggcgccgga
aataattcgaattcgtcgcaggggtcgcaaaacgagcagaatttgacggagggacaaacg
gcggcggagaaaaagattgaattattgtgtaatgatgtggtgtgtgatccgtcgatggat
ttgaggaccgtcaagcagtttatttggaaatgctcgtccgatttgacttttttgtacaag
atgaagtccagtgttacatga

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