Culicoides brevitarsis: 134833304
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Entry
134833304 CDS
T10947
Name
(RefSeq) splicing factor 1
KO
K13095
splicing factor 1
Organism
cbri Culicoides brevitarsis
Pathway
cbri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134833304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbri03041
]
134833304
Spliceosome [BR:
cbri03041
]
Complex A
Other components
Complex A specific factors
134833304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_6
KH_KRR1_2nd
Motif
Other DBs
NCBI-GeneID:
134833304
NCBI-ProteinID:
XP_063703652
LinkDB
All DBs
Position
3:complement(27977929..27981972)
Genome browser
AA seq
717 aa
AA seq
DB search
MPSKHKDKDKNRESDEDDRERSKSRRSRSKEKRHRSRSRDRDRDRDRKKRSRSRDRKRRS
RSRDHRRRSRSRDRDRHRRSRSRDSRRRSKSRSRRDRSRERNRSRDNDRPKIPIPDASML
LQHSQQLMAQQALALQQQLQQQNQSQGLLQTPLLTAASIGAAIKQDFLIDAFSNANQSMA
SSRNFTNLLENIPGDVRPATTNVIENSQNTNSNDASNSQDGSRPERKRKKKSRWAGTESE
KTFIPGMPTVLPAGMTPDQQQAYLVQLQIEEISRKLRTGDLGISQNPEERSPSPEPIYSS
DGKRLNTREFRTRKRLEEQRHQLILRMQCMNPEFKPPSDYKPPVIRVSDKVLIPQEEHPD
INFVGLLIGPRGNTLKAMEKETGAKIIIRGKGSVKEGKVGRKDGQPLPGEDEPLHAFITA
SNPECVKKAVDKIKDVIRQGIEVPEGHNDLRRMQLRELAQLNGTLRESDCPRCNNCGSTE
HKSWLCPERQNVTNNIVCTACGGIGHISKDCRTKRPGMGGVPAADSQTKIDEEYMSLMAE
LGEGPEPPGPAAAETKPAMPVISNVPRSNFSNLFEPKQPARAIMPAAPPVTNSYMETPQP
PPNVWPSAPPPPIPSLMSNPPIPGLNGAPLNPILPPPNVNPPPPFAPAANNWNHGICPPG
ENPTDLPPPPPGPPGTATSWNANPPPMPPGTFPPSNSFNCYPPIPNLTLPPPPPPPS
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgaagcacaaagacaaggacaagaatcgcgaatcggatgaagatgatcgcgaa
agatcgaaatccagacgttcacgcagcaaagaaaagcggcacagatcccgcagcagagac
cgcgatcgtgacagagacaggaaaaagcgttctcgttcccgtgatagaaaacgtcgttca
aggtcacgcgatcatcgaaggcgttctcggtctcgcgatcgtgatcgccatcgtcgtagt
cgttcccgtgacagcagacgacgcagcaaatcccgttcgcgtcgtgatcgaagtcgcgaa
aggaatcgttcgcgcgacaatgatcgcccgaaaatcccgattcccgatgcctcgatgctg
ttacagcactcgcaacaactgatggcacaacaagcgttggcgcttcagcaacaattacaa
caacaaaatcagtcgcagggtttgttacaaacgcccctgttgacagctgcctccattgga
gcggcaattaaacaagatttcttgatcgatgccttctcgaatgcgaatcagtcgatggca
tcatcgcgtaatttcacaaatttactcgaaaatatccccggagatgtgagaccagcaacg
acaaatgtcatcgaaaattcacaaaatacgaatagcaacgacgcaagcaactctcaagac
ggatcgcgacccgaaagaaagcgcaaaaagaagtcccgatgggcaggaacggaaagcgaa
aagacttttatcccgggaatgccgacagttcttccagctggcatgacgcccgatcagcaa
caagcctatcttgttcaactacaaatcgaagaaatcagtcgaaagctccgaacaggcgac
ttgggcatctcacaaaatccagaagaaagatctccctcaccagaacccatttactcgtca
gacggtaagcgattgaatacgcgcgaattccgcacccgaaaacgtctcgaggagcaacgg
catcaacttatcctgcggatgcagtgtatgaatcccgagtttaagccgccatcggattac
aaacctccagttattcgtgtcagcgataaagtcttgattccgcaagaggaacatcccgat
ataaactttgtaggtttgctgattggaccgcgcggcaacacgctgaaggcaatggagaag
gaaaccggcgcaaaaatcatcattcgtggtaagggttccgtgaaagaaggtaaagttggc
aggaaagatggtcaaccgttgccgggagaagacgaaccgttgcatgcctttatcaccgcc
agcaatccagagtgcgtgaaaaaggccgtggacaagataaaagatgtcattcgacaaggt
atcgaggtacctgaaggtcataatgacttgcgacgcatgcaattgcgcgaattggcgcag
ctgaatggcacgttgcgcgaaagtgattgtccgcgatgtaataattgcggaagtacggag
cacaagtcatggctttgtcctgaacgtcaaaatgtcacaaacaacattgtttgtacagct
tgcggcggaattggtcacatttcgaaagattgtcgtacaaaacgcccgggaatgggaggc
gttcctgccgccgattcccaaaccaagatcgacgaagaatacatgagtctcatggctgaa
ttaggagaaggtcccgagcctccaggacctgctgcagcagaaacgaaacccgcaatgccc
gtcatttcgaacgtgcctcgcagtaacttttcaaatttgttcgagcccaagcaaccagcg
agagcaattatgcctgcagcgcctcccgttacgaattcctacatggaaacgccgcagcca
ccgccgaatgtttggccaagtgctccgcctccgccaattcctagtctcatgtcaaatccc
ccgatacccggactcaatggagctcccttgaatcccatattgccgccaccaaatgttaat
ccgccgcctccttttgcacccgcggcaaacaattggaatcatgggatttgcccgcccgga
gaaaatcccacggatttgcctccgcctccgcctgggcctccgggaactgcgacgtcatgg
aacgcgaatccgcctcccatgcctccaggcacttttccgccaagcaattcgttcaattgc
tatcctccaattcctaatttaacacttcctcctccccctccgccgcccagctaa
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