Culicoides brevitarsis: 134833323
Help
Entry
134833323 CDS
T10947
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
cbri Culicoides brevitarsis
Pathway
cbri03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134833323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbri03019
]
134833323
Messenger RNA biogenesis [BR:
cbri03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
134833323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
134833323
NCBI-ProteinID:
XP_063703682
LinkDB
All DBs
Position
1:complement(45336879..45338850)
Genome browser
AA seq
574 aa
AA seq
DB search
MATMEDENDESWLYGNSEGKDTASEQPPGTEDDAVTKVDGEENAKNNSVAPVVETEDGDA
KDDEPEEVANDEEVHFQPANEMEDETMEEAFHEDDGEEKSSKNQKSEDEDSDSDEDDDIN
VVIGDIKSGPTYNIKHRGQINSGAPNAAGAKQPAGKFNIEEFESVGTIAGVAAHEFSIDS
LEDKPWRKPGADITDYFNYGFNEDTWRSYCERQKRFRVAESGVGLASLSQHVTQPVPNAN
GPSTGQGMGGGFMSRRFGAPRFRHPGHIGVIGGENHQNNRDNMDHMGNRGDGDMSPMKNQ
HPKENVIQVMTADRREYSRMNRGFGMDDQPPMNEQPFYEENQFNYMNQYEPTQDSQAWMG
GGNSAWGPSGIKELTPGPNLMQQQQNMGPPGHHGPPGHMGMPPGMNMGPNMGGNHPNMGG
MNIPSHMNAPPNQNRYDNRRGDMGRGPPMDRNDRMQRRRSRSPRSRSRDRMRRPRSRSFD
RGGGNMNVAGGSSKRMRSRSRERSKRPRSRSRERSKRPRSRSRDRTKRSKSKDKDRKRSK
SKDKDRKKDSKDSKDKEKKDKKSHKKDKPEKEAE
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccatggaagatgagaacgacgagagttggttgtacggaaattcggagggaaaa
gacactgcgagtgaacaaccgcccggcacggaagatgatgcggtgacaaaagttgatggc
gaggaaaatgcaaaaaacaattcggtagctcccgtcgtcgaaacggaggatggcgatgcg
aaagatgatgaacccgaagaagttgcaaatgacgaagaagtgcatttccagcccgcgaac
gaaatggaagacgaaacgatggaagaagcgtttcacgaagacgatggcgaagaaaaatct
tcgaaaaaccaaaagtccgaagatgaagattccgatagcgatgaagatgacgatatcaat
gtcgtaattggcgatatcaaatcgggtccgacgtacaatatcaagcatcgtgggcagata
aattcgggcgctccaaatgccgcaggcgcaaaacaacccgctggaaagttcaatatcgaa
gaattcgagtcagttggcacaattgccggggttgcagctcacgaattttccatcgattcg
ctcgaagataagccatggcgaaaaccgggagctgatattacggattatttcaattatggc
ttcaacgaggatacatggcgatcgtattgcgagcgacaaaagagatttagagttgcggaa
agcggcgttggattggcaagtttgtcgcaacatgtcacacaacctgtcccgaatgcaaat
ggaccatcgactgggcaaggaatgggaggaggattcatgtcgcgacgctttggagcaccg
agatttcgtcatccgggacatattggggtcattggaggcgaaaatcatcaaaataatcgc
gataatatggatcacatgggaaataggggcgatggcgatatgagtcccatgaagaatcag
catccgaaagagaatgtaattcaagttatgacagcagatcgacgcgaatacagtcgaatg
aatcgcggttttggcatggatgatcaacctccgatgaatgaacagccattttatgaggag
aatcagttcaattacatgaatcagtatgaaccgacgcaagattcgcaagcatggatgggc
ggcggaaactccgcatggggtcccagtggcatcaaagaactcacgccaggcccgaatctc
atgcaacaacaacaaaatatgggtccgccggggcatcatggacctccgggacacatggga
atgcctccgggaatgaatatgggcccaaatatgggcggaaatcatccaaatatgggaggc
atgaacattccatcgcacatgaatgcgccgccaaaccaaaatcgatacgataatcgacga
ggcgatatgggaagaggtcctcccatggatcgtaatgatagaatgcaacggagacgaagc
agatcgccgagatcacgatctcgagatcgaatgcgacgtcctcgttcacgtagctttgat
cgcggaggcggaaatatgaatgtagctggaggaagttcgaagagaatgcgttctcgttcg
cgtgaaagatcaaaaagaccgagatccagatcgcgtgaacgatcgaagagaccgagaagt
cgaagcagggatcgcacaaaacgctcaaagtcgaaggataaagatcgcaagagatcgaag
agtaaggataaagatcgcaaaaaagactcgaaagattcgaaggacaaggaaaagaaagac
aaaaaatcgcataagaaggacaaacccgaaaaggaagcagaataa
DBGET
integrated database retrieval system
