Culicoides brevitarsis: 134833359
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Entry
134833359 CDS
T10947
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
cbri Culicoides brevitarsis
Pathway
cbri04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134833359
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
GARP
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
134833359
NCBI-ProteinID:
XP_063703736
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All DBs
Position
1:complement(31343143..31359271)
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AA seq
1792 aa
AA seq
DB search
MAIRWNSIFKPILVALVSFIILAQVSNAQDPRSTSNRRIAHRIRPHPCEHSSCYPATGNL
LIGRENRLYASSTCGVKKPERFCIVSHLEEKKCFLCDTRKETEHDPLKNHRVGQIIYKNQ
PGTLEHSWWQSENGVEKVSLQLDLEAEFHFTHLILIFATFRPAAMLVERSYDFGRTWHVY
RYFAYNCAESFPGVPTVSRNITDVICDSRYSSVEPSKNGEVIFRVLPPNMNIANPYADHV
QNVLKMTNLRINFTKLHSLGDTLLDDRDEIQEKYYYGITNMIVRGSCSCYGHASRCLPLD
GVENRYDMVHGKCECTHNTKGLNCEQCEDFYNDLPWNPALGKQTNACKRCNCNDHASKCH
FDQQVYENSGRVSGGVCDGCEHNTQGQHCEQCLPFFYRDPLEDIRSPYVCKPCNCDERGS
LNDGICDSVEDLENGIVAGACHCKANVKGRQCDHCKEGYWNFTAENPEGCQECTCNILGT
INNSGCNVYTGECTCKRYVTGRDCNQCTPETYGLSSSEDGCTPCDCAIGGSLDNDCDVIT
GQCKCRPHMTGRNCSTPKQHYFIPTLHTVVEAEDQFTICTNEQYPGHNCSIVVGDRSYDR
VTEWTGPGYIRVNEGSELTFTVDDVPKTSQYDVVIRYVPQQKGGWEDVLVTIIRPDIYDP
SSSDPCRNKNPDEETEVPTSLSDYDRSAVVLYDVCLEKDKKYKFVITFRSQRRPESNPSA
QILIDSIALIPRIEVTTLFSQRPETEHIIDEIKRYNCNATYYEVNYDKKVDRHCQNLIHD
IEVIVNNGATECNCNPTGSVSKKCSEHGGECTCKPNIVGRQCDRCAPSTYGFSPEGCKPC
DCNSIGSKTAECDLVTGQCDCHPNTYGRECNQCQPGYWNFPNCEPCQCNGHSGTCDSKTG
ECLSCQDYTTGYNCDRCIDGYYGDPYLGSDIGCRPCRCPDTIASGHSYASSCALVPSTQD
VICHCEPGFAGARCDMCADNYYGNPDKPGGICKECDCNGNVDYNRLGNCDARTGKCLQCL
FNTGGDSCEYCKDGYYGDATRQDCRRCDCNVLGTNSTIQHCDRFTGQCPCLKNVEGKSCD
KCAANHWKIASGEGCEPCACDPIGSMEDQCNEYTGQCECKQGFGGRQCNECETNFWGDPN
EKCSPCDCDVYGSATSQCDRTTGQCVCHQGIGGYKCNQCARGYIGDAPHCRPCGECFDNW
DLILMKLRAQTDTVLDEAKQIKTLGATGAYTKEFESMALKIQQVQELLENTTIDDQTIAE
IQHEISVVMLHLNDSRGGLEGVEDDIKKISYAIGLSSAELDRMQAKSEEIKSFAHELKEN
ATKLQEANVEGALNLTRDALHRVNLLEDTNRDIRELNNKAEKHCKRIEQLINRNSVDYDT
FNRNNDELITQYQAELEGLSEKIPDLNEKMCDKRGDPCDSVCGGAGCNHCGGISCEKGAL
TKAEQAYKFAKDTEKIVKLKEEAADDLIRSISQAKSSAVDGYRKANNAFKATEGYYNETE
KLISEARDLITTLTDLIDNNTASPDEIKHLADQTINQELTLDPDEIKYLAKKIDETVAHL
ENVDSIIAATRNDMERVEELKADAEFTKKRAEAALKRAEEVVKDLNDAEEAQTKARVAIK
QANEDIDLAKIDLEQIDNETGDAQTRASSTDDQVQKLNERLQNLVKNSLKNDLDAKDIKS
RADNVKDLAGNAHELVTQLKNEYLSANASLTERARKSEGARERAQLLLSRASKITVDTAN
KLKELQSMNDLYKTNEKELNDLEGTLNRLNVDVAYHLNTITERASYYRQCTS
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atggcaatacgatggaattcaatattcaaacctatcttagtagctttagtttcttttatt
atattagcacaagtttcaaatgcacaagatccccgttcgacaagtaatcgaaggatagct
cacagaatacgaccgcatccatgtgagcatagttcatgttaccccgcaactggcaatctc
ctcattggtcgtgaaaatcgattgtatgcctcgtcaacgtgtggcgtgaagaagcctgaa
cggttctgcatcgtttcccatttggaggagaagaaatgtttcctttgtgacacgcgaaag
gagacggaacatgatccgctgaagaatcacagagttggtcaaattatctataaaaatcaa
ccgggaactctcgaacactcttggtggcaatccgaaaatggcgtcgaaaaagtctccttg
caactggatttagaagctgaattccatttcacgcatttaatcctcatttttgcaactttc
cgacctgctgctatgttagtcgagcgttcttatgattttggcaggacatggcatgtctac
cgttatttcgcatataattgcgcggaatccttccccggagtgccaacagtctcgcgaaac
atcactgacgttatttgcgattcgcgttattcgagtgtcgagccatcgaagaacggtgaa
gtgattttccgtgttttgccgccaaacatgaacattgccaacccgtatgcggatcacgtg
caaaatgtcttgaaaatgacaaatttgcgtattaatttcacaaaattgcattcgttgggc
gacactttgttggatgatcgtgacgagattcaggagaaatattattacggtattacgaat
atgattgttcgtggatcttgctcgtgttatggacatgcttcgcgttgcttgcctctggat
ggcgttgaaaatcgctacgatatggtacatggcaagtgtgaatgtacgcataatacgaaa
ggtttgaactgcgaacaatgcgaggacttttacaatgatttgccgtggaatccagcgttg
ggaaaacaaacaaatgcctgtaaaagatgtaattgtaacgatcacgcctcaaaatgtcac
tttgaccaacaagtttacgaaaactctggacgtgttagtggcggtgtttgcgatggttgt
gaacacaacacacaaggacaacattgcgaacaatgtcttcccttcttctaccgtgatcct
ctcgaagatattcgcagtccttatgtttgcaaaccttgcaactgtgacgaacgtggctca
ttgaacgacggcatctgcgattccgttgaagatctcgaaaatggcatcgttgccggagct
tgtcactgcaaagccaatgtcaagggacgtcaatgcgatcactgcaaagagggatattgg
aactttaccgccgaaaatcccgaaggatgtcaagaatgtacttgcaacattttgggaacg
atcaataattcgggttgcaacgtttatacgggcgaatgtacttgcaagcgttacgttacg
ggacgcgattgcaaccaatgtactcccgaaacgtacggattgtcatcgagcgaagacgga
tgcacgccatgcgattgcgccatcggtggttcacttgataacgattgcgatgtcatcacg
ggtcaatgcaagtgtcgtccacacatgacaggaagaaattgtagcacaccaaagcagcat
tatttcattccgacgttgcatactgtcgttgaagcggaagatcagtttacgatttgcacc
aacgaacaatatccaggacacaactgctctatcgtcgttggtgatcgctcatacgatcgc
gtaacagaatggaccggacccggctatattcgtgtcaacgaaggcagcgaacttactttc
accgttgatgatgtgcccaaaacaagccaatatgacgtcgttattcgttacgtgccgcaa
caaaagggcggatgggaagatgttctcgtgacaattattcgtcccgacatttacgatcct
tcgtcttcggatccctgtcgcaacaaaaatcccgatgaagagaccgaagtaccgacatct
ctctcagactacgatcgcagtgctgttgttctctacgatgtctgcttggaaaaagataaa
aaatacaaatttgtcattactttccgcagtcaacggcgtcccgagtcaaatccatcggcg
caaatcttaattgattcgattgcgttgattccgcgcattgaagttacgacgttgttcagt
caacgacccgaaactgaacacattatcgatgaaattaagcgatacaactgcaatgcgacg
tactatgaagttaattacgacaaaaaagtcgatcgtcattgtcagaatttgattcatgat
attgaagttatcgtcaataacggagctacagaatgtaattgtaacccaactggatctgtc
agtaagaaatgtagcgaacacggaggcgaatgtacttgcaaaccaaacattgtgggacgt
caatgtgatcgttgtgcaccttcaacgtacggattcagtcctgaaggatgcaaaccatgc
gattgtaacagcattggatcaaaaacagcagaatgcgatttggtaactggtcaatgtgat
tgtcatccgaatacctatgggcgtgaatgtaaccaatgtcaacctggatactggaatttc
cctaattgcgagccttgtcaatgtaacggacattcgggaacgtgcgattctaaaactgga
gaatgtctttcatgtcaagattatacaacgggatacaattgcgatagatgtattgatggt
tattacggcgatccatacctcggaagtgacatcggatgtcgtccttgtcgttgtcccgac
acaattgcttcgggtcattcgtatgccagcagttgcgctctcgtcccaagcactcaagac
gtcatttgccattgtgaacctggatttgcgggagctcgttgtgacatgtgtgccgacaat
tattacggaaatcccgataaaccgggcggcatttgcaaggaatgcgattgtaacggaaat
gttgactataatcgacttggaaattgtgatgctcgaactggaaaatgcttgcaatgtttg
ttcaacacgggaggagacagctgcgagtactgcaaagatggatattatggagacgctaca
agacaagattgtagaagatgtgactgcaacgttctcggaacaaattcaacgattcagcat
tgcgatcgctttactggtcagtgcccatgtttgaaaaatgtcgaaggaaagagttgcgat
aaatgcgcggcaaatcattggaagattgctagcggagagggatgcgaaccttgcgcttgt
gatccaatcggttcaatggaagatcaatgcaatgaatacactggacaatgtgagtgcaaa
caaggatttggcgggcgtcaatgtaacgaatgcgaaacgaacttctggggagatccgaat
gagaaatgttctccttgcgattgtgacgtttatggatcggcaacatcccaatgtgatcgc
acaacgggacaatgtgtgtgtcatcaaggcatcggaggatacaaatgtaaccaatgtgct
cgcggatatattggagatgctcctcattgtcgtccttgcggagaatgcttcgataattgg
gacttgattctcatgaaattgagagctcaaactgacaccgtattggatgaagccaagcaa
attaagactttgggagcaacaggcgcttacacgaaagaattcgaaagtatggccttgaaa
atccaacaagttcaagaacttttggaaaataccacaattgacgatcaaaccattgccgaa
attcaacatgaaatcagcgtcgttatgctacacttgaacgattctcgtggcggattggaa
ggcgttgaagatgacatcaagaaaatttcctatgctattggtttaagcagtgctgaattg
gatcgcatgcaagcaaagagcgaagaaatcaaatcttttgcccatgaattgaaagaaaat
gcgacaaaattacaagaagctaatgtcgagggtgctctaaatctcacgcgtgatgcctta
catcgcgtgaacttgctcgaagataccaatcgtgacatccgcgagcttaataacaaagct
gaaaagcactgcaaacgcattgaacaactaatcaaccgcaattccgtcgattatgacact
ttcaatcgcaacaatgacgaacttatcacgcaatatcaagccgaactcgaaggtctaagt
gagaaaatccccgatttgaatgagaaaatgtgcgataaacgtggcgatccatgcgacagt
gtctgcggcggagctggttgcaatcattgcggaggtatttcatgcgaaaagggtgcctta
acgaaggccgaacaagcctacaagttcgcaaaagacacggaaaagatcgtaaaattgaag
gaagaagcagctgatgatctcattcgttcgatttcgcaagcaaaatcaagcgctgtcgat
ggttatcgtaaggcaaacaacgcttttaaggcaacggaaggttattacaacgaaaccgag
aagctgattagcgaagcacgagacttgataacgactttaacggacttaattgacaacaac
acggcatctccggatgaaattaagcatttagctgaccaaaccatcaaccaagagctcact
ttggaccccgatgagatcaaatatttggcgaagaagatcgacgagacggttgctcacttg
gaaaatgttgattccatcatcgcagcgacacgcaatgacatggaacgcgttgaagaattg
aaagcagatgcggaatttacaaagaaacgtgctgaagctgccttgaaacgcgctgaagaa
gtcgtcaaagacctaaatgatgccgaagaagctcaaacaaaggcccgtgttgcaattaaa
caagcgaatgaagacattgacttggcaaagattgatttggaacaaatcgacaacgaaaca
ggagacgctcaaacccgagcaagttccacggacgatcaagtacaaaaattgaacgaacgc
ctacaaaatctcgtcaaaaattcgttaaagaacgatttggatgccaaggacatcaagagt
cgtgctgacaatgtcaaagatttggcaggaaatgctcatgaattagtcactcaattgaaa
aacgaatacttgtcggcaaatgcttcgttaacggaacgtgcaagaaaatccgaaggtgct
cgcgaacgtgcccagctacttttgtctcgagcatccaaaatcaccgtcgataccgccaac
aaattaaaggagctacaaagcatgaacgacttgtacaaaacaaacgaaaaagaattgaat
gacctcgagggcacacttaatcgcttgaatgtcgatgttgcctaccatctcaacacaatc
acggaacgagcatcttactacaggcagtgtacatcataa
DBGET
integrated database retrieval system