Entry |
|
Name |
(RefSeq) sodium channel protein Nach-like
|
KO |
K03440 | acid-sensing ion channel, other |
|
Organism |
cbri Culicoides brevitarsis
|
Brite |
KEGG Orthology (KO) [BR:cbri00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:cbri04040]
134833400
Ion channels [BR:cbri04040]
Ligand-gated channels
Acid-sensing ion channel (ASIC)
134833400
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
3:complement(27854425..27857248)
|
AA seq |
585 aa
MSSAAFSAVPSASGLRDRVLKLPWWSSLKNVTYELCMKYSIHGYKNLVEAKRMSLEKFIW
FVVHVVAASVSLWIVWSTWTEFTDNPTITTLESQNYPIGKKAFPAVALCNINRISKSRAR
QYAIQLAQKSVEQQRLEGNLDAEVTEELIARYFANIRYLGRLLDFDIEGNEIFLSFQEEL
EVLDPDPLLGMWDVQKTFEYLRPNCEDLLLSCRFQEVDHNCTELFKARRTGIGVCCVFNS
ARPSGDKTDLALDAAFPVGIGWKNGLNIVVNTSTADYYYPIMNFPGIFVLLADPMEYADI
TTGNARTEIIDPNTENFIRISVNVYESDSEVKNYAVEKRNCKFSDEDFEEYRGRYTYTEC
LIKCKIKSIIDLCGCIPFFMPINHVDLVKNTTLRCTLQHIPCLNKYRVKWRTITPSVPDI
PGLEQEYQDSLNCPQCFSLCGYTQYKLEGTFNPIIKNPPGGMLQNYTNITDMSIIRVFYA
EDTGLQYKISVTNTWFDLLSTFGGLFGLFLGFSIMTVLEIVYFCCFRMYQYLTRQFDDEE
DDLKISIRKEMYPSRKLPPSYKEIERSLVSGYNRKMKLHEVYEEE |
NT seq |
1758 nt +upstreamnt +downstreamnt
atgtcaagtgcagctttttccgctgttccgtcagcttcgggattgcgagatcgcgtttta
aagcttccttggtggagttccctcaaaaatgtcacgtatgagctgtgtatgaagtacagc
attcatggctacaaaaatttggtcgaggcgaaaaggatgtctctggaaaagttcatttgg
ttcgttgttcatgtcgttgcggcaagtgtctcactttggatcgtttggagtacgtggacc
gaatttacggataatccgacaattacgacgctggaaagtcagaattatcccatcggcaag
aaggcctttcccgcagttgcgttatgcaatattaatcgcattagtaaatcacgcgcacga
caatatgcgatacaattagctcaaaagtcagttgaacaacaaagactcgaaggaaatctc
gatgctgaagttacagaagaattaattgcgagatatttcgcaaacattcgttatctcggg
cgattacttgactttgacatcgaaggcaacgaaatatttttgagctttcaggaggaatta
gaagtgctcgatccggatccgctattaggaatgtgggacgttcaaaaaaccttcgaatat
ttacgtccgaattgcgaagatcttttactgtcatgtcgtttccaagaggttgaccacaat
tgcacagagttgtttaaagcgcgtcgcacaggaattggcgtttgttgtgtctttaactca
gcgagaccttcgggggataaaaccgacttagcccttgatgctgcctttcctgtcggaatt
ggatggaaaaatggcttaaatatcgtcgtaaatacctcaacggcggactattactatcca
ataatgaattttccgggcatctttgtcttgcttgctgacccaatggaatatgctgacata
acaacgggcaacgctcgcacggagataattgatcccaatacggaaaattttatcagaatt
tcagtcaacgtttacgaatctgactcggaagtgaaaaattatgctgtcgaaaagcgaaat
tgcaaatttagtgatgaggattttgaagaatatcgcggaaggtatacgtacacagagtgt
ttgatcaagtgcaaaatcaaaagtatcatcgatctttgtggatgcattccgtttttcatg
cctattaatcacgtggatttggtgaaaaatacaacgctgagatgtacattgcagcatatt
ccttgtttgaataaatatcgagtaaaatggcgaacaattaccccttcagtgcccgatata
cccggattggaacaagaatatcaagattccctcaactgtcctcagtgtttctccctttgc
ggctacactcaatacaaattagaaggaactttcaatccaattattaaaaatcctcccggt
ggaatgctccaaaattacacaaacatcacggatatgtccattattcgggtattttatgct
gaagataccggtttgcagtacaaaattagcgtcacaaacacgtggtttgaccttttaagt
actttcggaggcttattcggactctttttgggcttttccatcatgacagtgctggaaatt
gtctatttctgttgttttcgcatgtatcagtatctcacgcggcaattcgatgacgaagaa
gacgacttaaaaatcagtatccgaaaggaaatgtatccaagtcgaaagttgccgccaagt
tacaaggaaattgaacgaagtcttgtctccggatacaatcgaaaaatgaaattacacgaa
gtttatgaggaggaatag |