Culicoides brevitarsis: 134833595
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Entry
134833595 CDS
T10947
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
cbri Culicoides brevitarsis
Pathway
cbri04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
134833595
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cbri02000
]
134833595
Transporters [BR:
cbri02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
134833595
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
134833595
NCBI-ProteinID:
XP_063704030
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Position
3:25510936..25517586
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AA seq
625 aa
AA seq
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MTDSTQATEHLDDSVRKKNDEHGIEMPVRRNDSHETHVVVAKSDLPERGSWSTKLDFILS
VVGLAIGLGNVWRFPYLCYKNGGGAFLIPYFLTLILAGVPMFFMELALGQMLTIGGLGIF
KIAPIFKGIGYAAAVMSCWMNVYYIVILAWAIFYFFMSLRSDVPWRNCDNYWNTAACVNP
YARKDLLCWDKVNTFNNTVVKYCQLNGKNYTTAALSDPVKEFWERRTLMISDGIDEVGGI
RWELAGTLLIVWILCYFCIWKGVKWTGKVVYFTALFPYVLLTILLIRGITLPGAAEGIKF
YVMPNLSKLKESGVWIDAVTQIFFSYGLGLGTLVALGSYNKFTNNVYKDAIIVCCVNSST
SMFAGFVIFSVVGFMAHEQQRPVAEVAASGPGLAFLAYPSAVLQMPGAPLWACLFFFMLL
LIGLDSQFCTMEGFITAMVDEWPQLLRRRKELFIGIVCIISYFVGLTCITEGGMYVFQIL
DSYAVSGFVLLFMIFFECISISWAFGVNRFYDGIKDMIGYYPIGWWKFCWVFTTPAICVS
VFIFNLVQWAPVKYLNYEYPLWTHFFGWFTALSSMLCIPGYMIWLWRRTPGDTGTKLRLL
VRIDDDVATLREKMQAEQIKLHQGI
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgacagacagtacgcaagcaacagagcacttggatgactccgtgcggaagaaaaatgac
gagcacggcatcgagatgccagtccggcgaaacgattcgcacgaaacgcatgtcgtcgta
gcgaaaagcgacttacccgaacgaggctcctggagtacaaaattagactttattttatcg
gtagttggtttagcgattggcctgggaaatgtctggcgtttcccatacttatgctacaaa
aatggaggaggcgctttcttgattccgtactttttgacgctcatcctggctggtgtgccg
atgttctttatggagttggcgctcggtcagatgttgacgattggcggtttgggtattttc
aaaattgcccccatcttcaagggtatcgggtatgcagctgctgtcatgtcatgctggatg
aacgtttactacatcgtcatcttggcatgggctatcttctactttttcatgtcgttgaga
tcagacgttccatggagaaattgcgataattattggaacactgcagcttgtgtcaatccc
tatgcccgcaaagatctcctttgctgggacaaagtcaacacttttaacaacacagttgtc
aaatactgtcaattaaatggcaaaaattacacaacggcagctttgagtgatcccgtcaaa
gaattctgggaacgtcgtaccttgatgatttccgatggcatcgatgaagttggcggcatc
cgatgggaattggctggaacattgttgatcgtgtggattctctgttatttctgcatctgg
aaaggtgtgaaatggaccggaaaagttgtgtatttcaccgctttgttcccgtatgttttg
ttgaccattttgcttatccgtggaatcacattgccaggagctgcagagggaattaagttt
tacgttatgccgaatttgtcaaagttgaaagaatctggggtatggatcgacgctgtcacc
caaatcttcttctcatacggtctcggtttgggaacattggtcgccttgggcagttacaac
aaattcacgaataacgtgtacaaggacgccattatcgtttgttgtgtcaactcaagtacg
agtatgtttgctggttttgtcattttctccgttgttggtttcatggcgcacgaacagcaa
cgacctgtagctgaagtcgcagcttctggtcccggtttggcatttttggcatatccatcg
gctgtcctgcaaatgcctggagctccgttatgggcatgtttgttcttcttcatgttgctg
cttatcggtctcgattcgcaattttgtaccatggagggtttcattactgccatggtcgat
gaatggcctcaattgttgcgtcgtcgcaaggaactcttcatcggtatcgtttgtattatc
agttatttcgtgggacttacgtgcatcacggagggcggcatgtacgtcttccaaattttg
gattcatacgctgtcagtggtttcgtcttgttgtttatgattttcttcgaatgtatttcc
atctcgtgggccttcggtgtcaatcgattctacgacggtatcaaggacatgatcggttat
tatccaatcggatggtggaaattctgctgggtattcacgacgccagctatctgtgtgagc
gttttcatctttaaccttgtacaatgggcccccgttaaataccttaactacgaatatccg
ctgtggacacactttttcggatggtttaccgctctttcgtcgatgttgtgcattcccggt
tacatgatttggttgtggcgtcgcactcctggagatactggaacgaaattacgtctgttg
gtccgaatagacgacgatgttgcaactcttcgtgagaaaatgcaagctgaacaaattaaa
ctccatcaaggaatttaa
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