KEGG   Culicoides brevitarsis: 134833646
Entry
134833646         CDS       T10947                                 
Name
(RefSeq) superkiller complex protein 8
  KO
K12602  WD repeat-containing protein 61
Organism
cbri  Culicoides brevitarsis
Pathway
cbri03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cbri00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    134833646
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbri03019]
    134833646
Messenger RNA biogenesis [BR:cbri03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     134833646
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_SPT8 Beta-prop_Vps41 NBCH_WD40 Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_WDR19_1st Ge1_WD40 Cytochrom_D1 Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 Beta-prop_NWD2_C Beta-prop_DCAF12 WD_LRWD1 WD40_like Beta-prop_Nup120_160 WDR54 Beta-prop_LRRK2 Beta-prop_WDR75_2nd Beta-prop_DCAF4 DUF7165
Other DBs
NCBI-GeneID: 134833646
NCBI-ProteinID: XP_063704115
LinkDB
Position
3:6611955..6613309
AA seq 340 aa
MYSLKHKEENAHEEAIWSCVWGRNVIELSPEKEDEPQQEKEEGEASSQEKEKPPKETRTE
DLIVTGGVDDVVKVWDLNKNKLTLRHTLQGHSLGIVSVDMSKDGKIIASSSLDSTLCLHD
TATGTLKQKIATGPVDLWTVAISPDNKYVISGSHEGKISMYSMENGKVEQVLDPQNGKFA
LSIAYSPDGKYIASGSIDGIIYIFDVAAGKITQTLEGHAMPVRSLCFSPDSQMLLTASDD
GHSKLYDVTHSHSDVMGTLSGHASWVLCVSFSGDGQRFVSSSSDKTVKVWDVAERKCLHT
FNDHTDKVWGVAYSPDTDQLISVSEDRAIHLYDCPSNIVF
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgtacagtttaaagcataaagaagaaaatgcccatgaagaagccatttggagctgtgtt
tggggtcgaaatgtgatcgaactcagtcccgaaaaggaagatgaacctcaacaggaaaaa
gaagagggtgaagcttcgtcacaagaaaaggaaaagccccctaaagaaacccgcaccgag
gatctcatcgtcacaggcggcgttgatgatgtcgtcaaagtatgggacttgaacaaaaat
aaacttacccttcgccacacgttacaaggtcactccttgggcattgtctccgttgacatg
tccaaagatggcaaaatcatagccagctcttcgctcgattcaacgctctgcttacatgac
accgctacaggaaccctaaagcaaaaaatcgcgacaggacctgttgatctttggactgtc
gcgatttcgccggataacaaatacgtcatctcaggttcgcacgaaggcaaaatttcgatg
tattccatggaaaatggcaaagttgaacaagttcttgatccgcaaaacggaaaatttgcc
ttgagcattgcttacagtcccgatggaaaatacatcgcaagcggaagtatcgacggaatc
atttacatttttgacgtagctgcgggaaaaattacgcaaacgttggaaggtcacgctatg
cctgttcgtagcttatgtttctcgccagactcacaaatgctgctgacagcttcagatgac
gggcattccaaattgtatgatgttacgcattcgcattcggatgtcatgggaacactttcg
ggacatgcctcgtgggttttgtgtgtttccttttcgggagatggacaacgctttgtgtcg
tcatcgagtgataagacagtgaaggtttgggatgtagcggaaaggaaatgtcttcataca
tttaacgatcacacggataaggtatggggagttgcttatagtcctgatacggatcaactg
atttcagtttcggaagatcgagcaattcatttgtacgattgcccatcgaatattgttttt
tga

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