KEGG   Culicoides brevitarsis: 134834346
Entry
134834346         CDS       T10947                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
cbri  Culicoides brevitarsis
Pathway
cbri03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cbri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    134834346
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cbri03021]
    134834346
   03036 Chromosome and associated proteins [BR:cbri03036]
    134834346
Transcription machinery [BR:cbri03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     134834346
   Coactivators
    SAGA/TFTC/STAGA complex
     134834346
Chromosome and associated proteins [BR:cbri03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     134834346
    STAGA complex
     134834346
    TFTC complex
     134834346
    SAGA complex
     134834346
    SLIK complex
     134834346
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 EIF3I WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_EML TFIID_NTD2 WDR55 ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_Aladin WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_1st WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_Nup120_160 NBCH_WD40 RMC1_N Beta-prop_TEP1_C Beta-prop_SCAP Tricorn_2nd Beta-prop_IFT140_1st Beta-prop_WDR41 Beta-prop_VPS8 Beta-prop_Vps41 WD40_RFWD3 eIF2A Beta-prop_WDR35_TULP_N B-prop_COPA_B_2nd
Other DBs
NCBI-GeneID: 134834346
NCBI-ProteinID: XP_063705048
LinkDB
Position
3:11140518..11144552
AA seq 736 aa
MASNKTKKKHEVIRSTLGNYLKQRNYSLARFHSANVERRTQSDFLLETTTRDQIIMNETI
KNEISRANSFLYSNVFCLNNNPAQVDKEFRKLQSFIMAQKTSLRRELLGLLPPLLCHLYI
EMLKGRDWKPAIEFLKKYANILGTLEPSAATQFTKVNGTMEETAANVVPLAYSVDQENPD
LAAFRQLVTTLSSITCIQDIENDIQAAHFRSCKYQIRMSDRTLLALRRYLSKDAHVLILQ
ILQIWIDIDTSDDKSSEAEDEPAPDDSGSILHHNSLNGFSSSALDDLHETDISKFTNLLA
SPKPATKRDEPKDPTETEYSQKPMDVDQASSSAGAGAATLLGDETKALAATRLQNLAGIT
EKVAAHQLPMQVFAVQNANEVLCTGNLDAMNCHFACGLEDAGVMLWSSDGSEQAGRKPYG
KSTTRQCGWHVTSVQDPEDEMSSDDEEEIQSAKQKKIRETRYERERERFWGKRSRQNVFD
DYGAFTFRGHSSGITDLLFSQFSELLITTSRDLTMRAWRATDYSCGAVYRGHNYPIWCVA
ESATDLYLATGSRDSTARLWSTTREFPLQIYAGHTQDVTAIAFHPNGKYLATGSVDQTIR
LWCITSGKLLRVLTDCRLPVHKIAFSPNGKWLAAAGEESRVRIFDLATSSQLYELKDHPS
AVSDVVWHADNQKLATATTSGVIRLYNVGDFESGATSSDTKTGGGATLLNQYGTQCKRVV
RIKFNGDGSLTCIGSV
NT seq 2211 nt   +upstreamnt  +downstreamnt
atggcgagcaataaaacgaagaaaaagcatgaagttattcgttccacgctcggaaattac
ctgaaacaacgaaattactcgctcgcccgtttccacagcgccaacgttgaacgccgcaca
caaagtgactttttgctcgaaaccacgacgcgggaccaaataatcatgaatgaaacaatc
aaaaatgagatttcgcgtgccaattcttttttatactcgaacgttttctgcctgaacaac
aatccggcgcaagttgacaaggaatttcggaagttgcagagtttcataatggcacaaaag
acgtcgttgcggcgggaattgctcgggttgttgccgccgttgttgtgtcatttgtacatc
gagatgctcaagggacgcgattggaagccggcaattgagtttttgaaaaaatacgcgaat
attttggggaccctcgagccatcagctgccacgcaatttaccaaggtcaatggcacgatg
gaggaaacggcagcgaatgtggtgcctcttgcgtattccgtggaccaggaaaatccggat
ttggcggcgtttcgacaactggttaccactttgagcagtattacgtgcatccaggatatc
gagaatgacattcaggcggcgcactttcgttcctgcaaataccaaattcggatgagtgac
cgaacgttgctcgctctgaggcgttatttgtcgaaagatgcgcacgttttgattctgcaa
atcctccaaatttggatcgacatcgatacgagtgacgataaatcgtcggaggcggaagat
gagcccgctcccgatgactctggcagcattttgcatcacaacagtctcaatggcttcagt
agctccgccctcgatgaccttcacgaaacggacattagcaaatttacgaatctcctggca
tcgccaaagcctgccacgaaacgcgacgaacccaaagacccaaccgaaacagaatactca
caaaaaccgatggatgtcgatcaagccagttcctcggcgggggcgggggcggcgacgttg
ctcggtgacgaaacgaaagcccttgctgcgacccgtctccaaaatctcgccggaattacg
gaaaaagttgcggcccatcaactaccgatgcaggtttttgccgtgcaaaacgccaatgaa
gtgctttgcacgggaaatttggatgccatgaattgtcattttgcctgcgggctcgaggat
gccggcgtgatgctttggtccagtgatgggagtgaacaagcggggcggaaaccttatggg
aaatcgacgacgaggcagtgcggatggcatgtgacgagtgtgcaggatccggaagacgaa
atgtcgagtgatgatgaggaggaaattcagagtgcgaaacagaagaaaattcgggagacg
cggtacgagagggaaagggaacgattttgggggaagcggagtaggcagaatgtgtttgac
gattacggtgcatttaccttccgaggccacagcagcggcataactgatctcctattctca
caatttagcgaattactgataacgacgtcacgtgacctgacaatgcgtgcctggcgcgcc
acagattacagttgcggagccgtgtatcgcgggcacaattacccgatttggtgcgtggcg
gaaagtgcgaccgatttgtaccttgcaacgggctctcgtgacagcacggcacgactttgg
tcaaccacgagggaatttccgttgcaaatttacgccgggcacacacaagatgtcaccgca
atcgcattccatccaaatggcaaatacctcgcgacgggttccgttgaccaaacgatccgg
ctgtggtgcatcacgagcggcaaattgctccgagtactcacagactgccgattgccggtg
cacaaaatcgcttttagtccgaatggcaagtggctagctgccgcgggcgaagaatcgcga
gtgaggattttcgatttggcgacaagttcgcaactttacgagctgaaagaccatccgagt
gccgtgagtgacgtcgtttggcatgcggataatcagaaattggcaacggcgacaacgagt
ggcgtcattcggctgtataacgtgggggatttcgagagtggggcaacgtcgagcgacaca
aagaccgggggaggagcaactttgttgaatcagtatggcacgcagtgcaaacgagtcgtt
aggataaaatttaatggggatggcagtttaacgtgtatcgggagtgtgtag

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