Culicoides brevitarsis: 134834775
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Entry
134834775 CDS
T10947
Name
(RefSeq) probable cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
cbri Culicoides brevitarsis
Pathway
cbri03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134834775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbri03019
]
134834775
Messenger RNA biogenesis [BR:
cbri03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
134834775
U7-dependent histone pre-mRNA processing factors
134834775
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B_2
Lactamase_B
PglZ_C
SRP54
Motif
Other DBs
NCBI-GeneID:
134834775
NCBI-ProteinID:
XP_063705620
LinkDB
All DBs
Position
3
Genome browser
AA seq
757 aa
AA seq
DB search
MTSIIKLHTISGAMDESPPCYLLEVDEVRILLDCGWDEKFDPNFIKELKKYVHTIDIILL
SYPDPQHLGALPYLVGKLGLNCPIYSTIPVYKMGQMFIYDLFMSHFNMYDFDLFTLDDVD
TAFDRITQLKYNQSVALKGKGLGITITPLPAGHLIGGTIWKIVKVGEEDIVYATDFNHKK
ERHLNGCELEKLQRPSLLITDCYNARYQQARRRARDEKLMTNILQTLRNKGNVLIAVDTA
GRVLELAHMMDQLWKNKESGLLTYSLALLNNVSYNVIEFAKSQIEWMSDKLMKSFEGARN
NPFQFRHVQMCHSMKDLANVPSPKVVLASSADMESGYSRELFVQWASGANNSIIITSRTS
PGTLARDLIDNGGNGRKIELDVRRRVELEGAELEEYMRTHGTKVTKSIIKEEESSDSDSD
DELQMSVITGKHDIVVRAGKSQTGFFKSSKKHYAMFPFFEEKIKYDEYGEIIQLEDYRLM
DTGDGYNNENDTDSKMNIKREEDIKKEKDIKSEDTLLAERPSKCISSRKLIEVNAQVQFI
DFEGRSDGDSLLKILSQLRPRRVIVVRGSQTNTELVADHCRKNIGARVFTPNRGDTVDAT
TESYIYQVRLTEALVSQLKFQKGRDAEVAWIDGQISIRTKQFEQENSEGKENTPMDTDQV
IVKDDEQERILALEPLSDDTKIAPHNSVFINELKLVDFKQVLNRNNIPSEFINGVLWCAG
EKVALRRVDTGKVTMEGTFCEEYYKIRELLYEQYAIV
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaattataaagctgcacaccatctcaggagccatggatgagagtcctccctgc
tatttgctcgaagtcgatgaagtccgtatcctacttgactgcggttgggacgagaaattc
gatccaaatttcatcaaagagctcaaaaaatacgttcataccatcgatattatccttctt
tcgtatccggatccgcagcatttgggtgccttgccgtatctcgtgggaaaattagggcta
aattgtcccatttactccacaattcccgtttataagatgggacaaatgttcatttatgat
ctcttcatgtcgcatttcaacatgtacgatttcgatttgttcacgttggatgacgtcgat
acggcattcgatcgcatcacgcagctaaaatacaaccaaagtgtcgcgttgaaggggaaa
ggactcggaatcacgataactccgttgcctgcgggacatttaattggcgggacaatttgg
aagattgtcaaggtcggagaggaggatattgtgtatgcgacggattttaatcacaagaag
gagaggcatttgaatgggtgtgagttggagaaattgcaacgtccctcgctgttgattacg
gattgttataatgcgagatatcagcaggcacggagaagagcacgggatgaaaagttgatg
acgaatatcttgcaaacgttgaggaataagggaaatgtcttgattgctgttgatacggca
gggagagtgttggaattggctcatatgatggatcaactgtggaaaaacaaagaatccggt
ctcttgacctactctctcgcccttttgaacaacgtcagttacaacgtcatcgaattcgcc
aaatcccaaatcgaatggatgagcgacaaactgatgaaaagcttcgaaggtgctcgcaac
aacccattccaattccgtcacgtgcaaatgtgtcactcgatgaaggatttagcaaacgtc
ccgagcccaaaagtcgttctcgccagttcagctgacatggaaagcggttattcgcgcgaa
ctttttgttcaatgggcatcgggagcgaataacagcataattattacaagtcgaacatcg
cccggaacactcgcacgtgacttgatcgacaacggaggcaacggaagaaaaatcgaactt
gatgtgagacgaagagttgaactagaaggcgccgaattggaggaatatatgcgaacgcat
ggcacaaaagtcacaaaatccatcattaaagaggaggaatcttccgattcggattctgat
gacgagttgcaaatgtcggtaatcacgggaaagcatgatatcgtcgttcgcgcgggaaaa
tctcaaactgggttcttcaaatcgagtaaaaagcattacgctatgttcccgttcttcgag
gaaaagataaaatacgacgaatacggcgaaattatccagttagaagactatcggttgatg
gatacgggcgacggatacaacaacgagaacgacaccgacagcaaaatgaacataaaacgc
gaagaagacatcaaaaaagagaaagacatcaaatcggaagacactttactcgcagaacgt
ccttcaaaatgcatcagcagccgaaaactcatcgaagtaaatgcccaagttcagtttatt
gacttcgaaggacgttctgatggcgattctttgttgaaaattctctcccagctgcgcccg
cgacgcgtaattgtcgttcgtggcagtcaaaccaacacagaactcgtcgcagatcattgc
agaaaaaatattggcgcacgtgttttcactccaaatcgcggagataccgtcgatgccacg
accgaatcgtatatttatcaagttcgactcacggaagcgcttgtaagtcaattgaaattc
caaaaaggacgcgatgcagaagttgcctggatcgacggacaaatttccattcgaacgaag
cagtttgagcaagaaaattccgaaggcaaggaaaatactcccatggatacggatcaagta
atcgttaaagatgacgaacaagagagaattctcgctttggaacctttaagtgacgacaca
aaaatcgcgccgcataactcagtgttcattaacgaactaaaactcgtcgattttaagcaa
gttttgaaccgaaacaacatcccatccgaatttattaacggagttttgtggtgtgcaggt
gaaaaagtcgcgttacgaagagttgacacgggcaaagtcacgatggaaggcactttttgc
gaagaatattacaaaatacgggagttgttgtatgagcagtacgccattgtttaa
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