Culicoides brevitarsis: 134834835
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Entry
134834835 CDS
T10947
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
cbri Culicoides brevitarsis
Pathway
cbri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134834835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbri03041
]
134834835
Spliceosome [BR:
cbri03041
]
Complex B
Other components
Prp19-related factors
134834835
Complex C
134834835
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
RRM_occluded
zf-CCCH_2
RRM_YTH1
zf-CCCH_4
zf-CCCH
Nup35_RRM_2
RRM_3
zf-CCCH_DUS3L
Motif
Other DBs
NCBI-GeneID:
134834835
NCBI-ProteinID:
XP_063705695
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All DBs
Position
3:26665250..26666653
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AA seq
393 aa
AA seq
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MAMSKTTNTYNRQNWEDSEFPILCQTCLGDNPYVRMIKEKFGKECKICSRPFTVFRWCPG
ARMRFKKTEVCQTCCKLKNVCQTCLLDLEYGLPTQVRDAALKIQDDLPQSDVNKEFYIQN
IDAQLAQTDGTVAAGTVGKSLAASDMLAKLARTQPYYKRNRPHICSFWVKGECKRGEECP
YRHDKPNEPDDPLSEQNIRDRYYGVNDPVADKLLKRAASLPRLNPPEDKTITTLYVGNLG
EHITEVDIRDNFYQFGEIRTVSLVPRQQCAFVQFTKRASAEMAAEKTFNKLVMGGKKLSI
KWAHSQAKQGPPKVPKGNPAVENIPGLPPQIPLPPPIHASDYVVMPSGMKLHSLPSSYGG
AGPSTSYVPPMEGQGPGIHYPSQNPNRLGATQK
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggctatgtcaaagacgaccaacacctacaatcgtcaaaattgggaggactcggaattt
cccatactttgtcagacttgtttgggtgacaatccctacgtgcgaatgatcaaggagaaa
ttcggcaaagaatgcaagatctgctcgcgtcccttcaccgtatttcgttggtgcccggga
gctcggatgcgtttcaagaagaccgaagtgtgtcagacgtgttgcaagctgaaaaacgtt
tgtcaaacgtgtctccttgacttggaatatggcttgccaacgcaagtacgtgacgcagcg
cttaaaattcaagacgatttaccacaaagcgatgtcaacaaagagttttacattcaaaat
atcgacgcgcaattggcgcaaactgatggaactgtcgctgcgggcaccgttgggaaatct
ctcgctgccagcgacatgttggcaaaactggcacgaacgcaaccctactacaaacggaat
cggcctcacatttgctccttttgggtcaagggcgaatgcaaacgtggcgaggaatgtccc
tatcgtcacgacaaaccaaacgaaccggatgacccgttatccgaacaaaacattcgcgat
cgttattacggcgtaaacgaccccgttgcggacaaattattgaaacgggcagcttccttg
ccacgcttaaacccgcccgaggataaaactatcacgacgctgtacgtgggaaatttgggc
gaacacattaccgaagtcgacattcgtgacaatttctatcaatttggggagattcgaaca
gtttcccttgtcccgcggcaacaatgcgcctttgttcagttcacgaaacgagcttcggca
gaaatggcagctgaaaaaacttttaataaactcgtgatgggcggcaagaaactctccatt
aaatgggcacattcacaggcgaaacaaggaccgccgaaagttcccaagggaaatcccgct
gtggaaaatattccgggattgccgccacaaatcccacttccgccgccaattcatgcgtcg
gattatgtcgtaatgccgtcgggcatgaagctacattctctgccgagctcttatggcggc
gcaggaccaagcacgagttatgtgccccctatggaaggacaaggaccggggattcattat
ccgagtcagaatccgaatcgacttggcgcgacacaaaagtaa
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