Culicoides brevitarsis: 134835057
Help
Entry
134835057 CDS
T10947
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
cbri Culicoides brevitarsis
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbri03009
]
134835057
Ribosome biogenesis [BR:
cbri03009
]
Eukaryotic type
90S particles
Other 90S particles
134835057
Pre-60S particles
Other pre-60S particles
134835057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
TPR_TTI1_N
Motif
Other DBs
NCBI-GeneID:
134835057
NCBI-ProteinID:
XP_063705978
LinkDB
All DBs
Position
3:complement(20925312..20929437)
Genome browser
AA seq
1220 aa
AA seq
DB search
MRKIRSKLKRKTNNQKWKRGQSSTSNPTKKVYRNRARFNNVSGTCLTLDGVGKLNQIPRQ
FNDMDDNESMYSNAPTTTVRSFLSSFSTNTNASFSKLLDCDSLNERQKEMVAVLAASTET
IKEEEGNETSTEYFLAFINSLAITNEVNRADPIIGLMKLVIKAVPAAVMQDKFTLCRTIF
LKLMNSFEKYDRHSGLIDVIYCTSTLLSTQDFGKWNSNDMKPLLHALLAFTTHSKPKIRK
SAVSSVSYFLSRCKIGFEQISYTTKVPFEASKQVTLYCIQHLSANELNGNPVTVLHTLGL
VEKCFPFLDANDIKLICECLLSLSSTSNPLIRMHCYQAFYTLFDSEECQLSDVMAARLIT
AVFGLQPDSSDVRQTVAWITVLKKGYIFIVKKNPILCSDLLTQFVHLLVIELWSSNHLEI
RTTITNVLKDILKDAILKLVNIEVVDEKLIEVLNYLLKALKNPFALYQKDIIVLYSTVYE
VYGKRFSNELKETLKLISNKYSTDGDDRREIEICISSAIKNLNIGDILEAIPLANKNLDI
SIDNSWILPLLRENLRNSSLEYFYTDIVPLASICLKKWKHFEAIGKPNESHIYELLCCQL
WGLFPGFCRQPKDIEKFSMIARTVGTILSENLYLRAPILDGFKELIPSVISFENPESVGK
YARNYLPILFNLYITKPKGSYENDLRVNVLGIIKLFLLITPNDALNEMFNSAYNRLKTTN
VNDFAYNMIFDIIECFAIHLSPDQMIALYEDYVKPIFNTTEITESKNVSPKIKKGYRIIC
CILSNENENCKKFISQKKNDLEHLLMSTGELNGDNVKLTRLKCLKYLLDITKPSCDSSFV
KQCISEVILCFSNNPDKSNQLCTDMIKTIGTTFNDANKFDEFVHLMLFGFASEDSDLVIK
TIWSINYIFKFFGGIINDETLHLALENIYTSVQSKNRIEAKSALCTLFTCIKCIPRESLN
KYVNTLVATVSKMVPDTKRFCRLSYSHLLKKLCQYYTVQQITKIVPGDDIITHKLLKKIR
KGLNKSKTGNKNNALVDDEMKLESKLKSISINDVLKDSDNSEVDTDDEDSNEKIEKNDKI
YIKENAEKILDLTDINAISKISFKNKKSYCNNENVKDNVAKNVTFRTAPDGRLIIEEPKT
KLREIVRKSSCFTKRARESDDSESEKEEHTQTQSKGIHRMARSYKANKTINNNKKMRKET
SLGKKHIQPYAYLPFGSSKK
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaaattcgctctaaactaaaaagaaaaaccaataatcagaaatggaaacgtggt
caatcatcgacttcgaatcctactaaaaaggtctatcgtaatcgagctcggttcaacaat
gtaagtggcacatgcttgaccttagatggcgtaggcaaattaaatcaaatacctcgacaa
tttaatgatatggatgataatgaatcaatgtactctaatgccccaacaacaacagtacgt
tcttttttgtcaagcttcagcacaaacacaaacgcttcatttagcaaattgcttgattgt
gatagtttaaatgaacgtcaaaaggaaatggttgcagttttagcagctagcactgaaaca
ataaaagaggaagaagggaacgaaacatcaactgaatattttttagctttcataaatagt
ttggctataacgaatgaagtcaatcgagccgacccaattattggtttaatgaagttggtc
attaaagcagtacctgctgccgtaatgcaagacaaatttacactttgcaggacgatattt
ttgaaattaatgaattcatttgaaaaatatgatagacattctggtctcattgatgttata
tattgcacatctactctattaagtacacaagactttggcaaatggaatagcaatgatatg
aaacctctgctacatgctcttttggcatttacaacacactctaagccgaaaattcgaaaa
tcagcagtgagttccgtttcatatttcctaagcagatgtaagattggattcgagcaaata
tcttacaccacaaaagttccatttgaagcgagcaaacaagtaactctatactgcattcaa
catttatctgctaacgagttgaatgggaatcctgtaacagttttacatactcttggctta
gttgaaaaatgtttcccatttttggatgcaaacgatattaaattgatttgtgaatgtctt
ctttctctatcttcaacttcgaatcctttgataagaatgcattgttatcaagcattttat
acgctttttgattcagaagagtgtcaactttcggatgtgatggcagctagattaattact
gcagtgtttggtttacaacctgattcttccgacgtccgtcaaaccgttgcttggataacg
gtgttaaaaaaaggctatatatttattgtgaaaaaaaatccaatattatgttcagatttg
ttgacacaatttgttcatttgttagtaattgaattatggtcatctaatcatcttgaaatc
cgaacaactattacaaatgtcctcaaagatattcttaaggatgccattttgaagttagtt
aacattgaagttgttgacgaaaaactgattgaggttctgaattacttgttaaaggcacta
aaaaatccttttgcattataccaaaaggatattattgttttatattcaacagtttacgaa
gtatatggcaaaagattttcaaatgaactgaaggaaactttgaaattaatttcaaataaa
tacagcactgatggagatgatcgtcgagaaatcgaaatttgtatttcatcagcaatcaaa
aacctgaatattggagatattttggaagctattccattagctaataaaaatttagacata
tcaatcgacaattcgtggatattacctcttcttagagaaaatttaagaaattcttctttg
gagtatttttacactgatattgtgccattagcatctatatgcctaaagaaatggaaacac
tttgaagctattggaaagccaaacgaatcccatatttatgaattactctgttgccaactt
tggggtttgtttccaggattttgtcgccaaccgaaagacattgaaaaatttagtatgatt
gctaggaccgtgggaacaattttaagtgaaaatttgtatctacgagcaccaattttagat
ggtttcaaagaattgataccaagcgttatttcatttgaaaaccctgaatccgttggcaaa
tatgcaagaaattatctgccaattttgttcaacttgtatatcacaaaaccaaaaggcagt
tatgaaaacgatttacgagtaaatgtattgggtataataaaattatttttattaataacg
cccaacgatgcattgaatgaaatgtttaatagtgcatataatcgtttgaaaacaacaaat
gtaaatgattttgcatacaacatgatattcgacattatagagtgctttgcaatacatttg
agtcctgatcagatgattgctttatatgaagactacgttaaacccatattcaatactact
gaaataacagaaagcaaaaatgtttcaccaaaaataaaaaaaggttacagaatcatttgc
tgtattttgtcaaatgaaaacgaaaattgcaaaaagtttatatctcagaagaaaaatgat
ttagaacatttgttgatgagtaccggggagttgaacggagacaacgtaaaacttacacgt
ctaaaatgtttaaaatatttgttagacatcacaaagccaagttgtgactcaagcttcgtt
aagcagtgcattagtgaggtcattctttgtttttctaataaccccgataaatcaaatcaa
ctgtgtactgatatgataaaaactatcggtacaacttttaacgatgcaaataaattcgat
gaatttgtccatttgatgctttttggatttgcatcagaggattctgacctcgtaattaaa
acaatttggagtattaactacattttcaaattttttggaggtatcataaatgatgaaacg
ttacaccttgctcttgaaaacatatatacatctgttcaaagtaaaaatcgtatagaagct
aaatccgcattgtgtactctttttacatgtataaaatgtattcctcgagaatcccttaat
aagtatgtaaatactttagttgcaacagtttcaaaaatggtaccggacaccaaacgattt
tgccgtttatcatacagtcatttgttgaaaaaactgtgtcagtactacactgttcagcaa
ataaccaaaatagttccaggagatgatatcataacacataagttgctcaagaagataaga
aaaggcttgaataaatctaaaactggcaataaaaacaatgcattggtcgatgatgaaatg
aaacttgaaagtaaattaaaatctatatcgattaatgatgttctaaaggactctgacaac
tcagaagtcgataccgacgatgaagattctaatgaaaaaatagagaaaaatgataaaata
tatatcaaagaaaatgcagaaaaaattctcgatttgacagatatcaatgcaattagtaaa
atttcttttaaaaacaaaaaaagctattgcaataatgaaaatgtgaaagacaatgtcgca
aaaaacgtcacgtttcgaacagcacctgatggccgtctaattattgaagaaccaaaaacc
aaattaagagaaattgttagaaagtccagctgttttacaaagcgagcacgagagtccgat
gattctgaatcggaaaaagaagaacatactcagactcaaagtaaaggtatccatcgaatg
gctagatcttacaaagctaacaaaactataaataacaataaaaaaatgagaaaggaaaca
tctctcggtaagaaacatatacaaccttatgcatatttaccatttggttcttcgaaaaaa
taa
DBGET
integrated database retrieval system