Culicoides brevitarsis: 134835335 Help Entry 134835335         CDS       T10947                                  Name (RefSeq) collagen alpha-1(I) chain-like   KO K19719   collagen type II alpha Organism cbri  Culicoides brevitarsis Pathway cbri04512   ECM-receptor interaction cbri04518   Integrin signaling Brite KEGG Orthology (KO) [BR:cbri00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     134835335    04518 Integrin signaling     134835335  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:cbri00536]     134835335 Glycosaminoglycan binding proteins [BR:cbri00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    134835335 SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Motif Other DBs NCBI-GeneID:  134835335 NCBI-ProteinID:  XP_063706280 LinkDB All DBs Position 3 Genome browser AA seq 1162 aa AA seqDB search MCKICKEDTPLTTTTSTTTPPPTTTTPQPISERSTEQPARTHEIIPDLNVYSHHMYPHIL QSGDKGPNPEPFQYMEASIGPTGERGPPGPPGPSGLPGLPGKRGETGEPGAQGPPGPPGN RGLPGPPGKDGVGEDGEPGEPGKPGSPGPRGVPGLPGIKGPKGHRGFTGEKGETGSPGEK GAVGPAGPPGQGLRGERGERGRDGLQGPPGLRGEPGLRGEIGPQGQQGKQGVQGFPGAQG PKGDIGHPGLKGSTGDTGEKGADGAPGPIGSPGFPGPRGLPGVKGNDGEQGTVGPPGPAG DKGSKGESIKGDIGLPGPRGVPGQTGPEGKRGKKGMRGSAGERGPPGERGLQGLAGLPGN DGQPGSKGQMGPPGPVGVPGLKGSTGDVGPQGTAGLRGPPVHGPPGPPGRGDKGIPGLPG KDGKDGQRGPEGLPGPAGQKGNIGPPGVPGSKGATGERGLPGLTGSRGFQGLPGVNGKDG LPGPQGNPGTQGPQGERGERGQPGSPGIQGHPGAPGLKGDAGLNGQDGQQGPPGPPGSKG HAGLPGVGLPGLRGPVGHPGERGPPGSTGERGLPGERGERGLTGAPGERGEPGDKGENGI GIQGEPGARGERGERGPQGLQGIPGQVGPVGAKGDKGESGIKGTKGDGGLPGIQGFKGSR GEPGIPGSKGNRGEQGLRGDSGLLGPPGRPGKPGDVGPMGPQGMIGPIGPRGLKGEVGQQ GVQGQPGEKGNNGEKGDRGMPGLPGSTGPIGPRGARGVAGPQGNPGKDGIPGEQGKPGAI GPRGETGSAGEPGSRGSPGPPGAVGQQGNPGVPGIGEQGPPGERGLPGLRGIPGESGSPG QKGDIGDTGAKGMKGHRGLLGMQGLPGVPGKPGDKGERGTAGPPGPVGEPGSRGLTGQPG LVGMTGAAGPKGDTGNDGRPGHPGPPGPPGPPGPPGPSGDGFDYGAANLMAMLGRGSMNN QKGPSGDDVSEEQYPRDEELYNSNNILKNLNSLHTQIKLKMNGSKESPAQTCATLFSIHN KLKSGLYWIDPNGLSTTDAIQVYCDRETQATCLIAQPAEFNSINIVKASGTWFSEKINGN SLTYKADSSQIKHIQFLSSTVTQNITIDMNVSKEELRNIQKNLSIMLWNDAELKHNRPLQ YSSSTELICINFIIEGNCGWHT NT seq 3489 nt NT seq  +upstreamnt  +downstreamnt atgtgcaaaatttgcaaagaagatacaccgttaacgacaacaacatcgacaactacacca ccacccacgacaacaactccccaaccaataagcgagcgctcaacagagcaaccagctaga acacatgaaattattccggatcttaatgtttattcacaccatatgtatccacacatttta caaagtggagacaaaggtccgaatcccgagccatttcaatatatggaagcttcaattgga ccaacaggagaaaggggaccaccaggtccccctggtcccagcggattaccaggattacca ggaaaacgaggtgaaactggtgagcctggagcacaaggacctccgggacccccaggaaat cgcggattacctggtcctccagggaaagatggagtaggtgaagatggagagccaggagaa cctggaaagcctggcagtccaggtccacgcggtgttcccggccttcctggtattaaagga cctaaaggacacagaggttttactggagagaaaggtgaaactggatcgcctggagaaaag ggggctgttggtcctgcaggaccccctgggcaaggattaagaggagaaagaggcgagaga ggaagagatggactgcaaggacctcctggcttacgaggggaacccggcttaagaggagaa atagggccacagggacaacaaggaaaacaaggcgtacaaggttttccaggagctcaaggt ccaaaaggagatattgggcatcctggactgaaaggatccactggcgacactggagaaaaa ggagcagatggagctccaggtcctataggttcgcctggatttccaggacccagaggatta ccaggagtcaaaggaaatgacggagagcaagggacagttggtcctcctgggcccgctggt gacaaaggttcaaaaggagaatccataaaaggagatataggtttgcctggacctagaggt gttcctggccaaaccgggcccgaaggaaaaagagggaaaaagggaatgcgcggatctgcc ggtgaacgtggacctcccggtgaaagagggttgcaagggctagcaggactaccaggaaac gatggacaacctggttccaaaggacaaatgggacctccaggaccagtgggagtaccagga ttgaagggttcaactggtgatgttggacctcaaggaactgcgggactgaggggacctcca gttcatggaccaccgggacctcctggaagaggggataaaggaattcctggattgcctggt aaagacggtaaagacggacagagaggacccgaaggtttgccgggacctgctgggcaaaaa ggaaacattggacctcctggagtacctggctcaaaaggagctacaggagaacgaggttta cctggtttgactggaagtagaggtttccagggacttcctggtgttaatggaaaggatgga cttcctggacctcaaggaaatccaggaactcaaggtcctcaaggagaaagaggtgaacgt ggacaacccggttctccaggaatacaaggacatcccggcgcacctggattaaaaggagat gctggattaaatggacaagacggacaacaaggaccaccggggcctccaggatcaaaagga catgcgggattgcctggtgttggattgcctggattacgaggtccagttggacatccagga gaacgaggtccacctggttctactggtgagagaggacttccaggtgaaaggggtgaaaga ggtttgactggtgctccgggtgaaagaggagagcccggagataaaggagaaaacggtata ggaattcagggagagcctggagctcgtggtgaacgaggagaacgtggcccacaaggtctt caaggtattcccggtcaagttggaccagttggagcaaaaggagataaaggcgaaagcggc ataaaaggaacaaaaggagatggtggacttccaggtatacaaggctttaaaggatccaga ggagagcctggaattcccggatcaaaaggaaatcgcggagagcaaggacttagaggagat tccggtttattaggccctcctggcagacctggaaaaccaggagatgtgggacccatgggc ccacagggaatgattggtccgatcggacctagaggtttgaaaggagaagtcggacagcaa ggagtgcagggacaaccaggtgaaaaaggaaacaacggcgaaaaaggtgacagaggaatg ccaggtcttcctggttctactggaccgattggcccaaggggagcaagaggtgtagcaggt ccacaaggtaatcccggaaaagatggaatacctggagagcaaggaaaaccaggagcgata ggacctcgtggagaaacaggatctgctggagaacctggctctcgaggatctccaggtcct cctggtgctgtcggccaacaaggaaatcctggagtacctggtattggagaacagggtcct cctggagaaagaggtttgcctggactcagggggataccaggagaaagtggatcgcccgga caaaaaggcgatattggagacactggagcaaagggaatgaaaggacatagagggcttctc ggaatgcaaggattgccaggtgttccaggaaaacctggtgacaaaggagaaagaggaact gctggacctccgggcccggttggtgagccaggatctcgcggattgacgggacaaccagga ttagttggaatgactggagcagcaggacctaaaggagatacaggaaatgacggaagaccg ggacatccaggccctccaggtcctccgggtccaccgggaccaccaggcccttctggagat ggatttgactatggagctgctaatttaatggcaatgttaggacgaggatcaatgaataat caaaaaggaccttctggagatgatgttagcgaagagcagtatcctagagatgaagaatta tataactccaataacattttgaagaatttaaactctttacacactcaaattaagttgaag atgaatggcagtaaagagagtcccgcacaaacatgcgctacattgttttctattcacaac aagttaaagtctggcctatattggatcgatccaaacggattaagcacaacagacgctatc caagtttactgtgatagagaaactcaagctacttgtttaattgctcagccggcagagttt aacagcattaacattgtcaaggcgtcgggaacgtggtttagtgaaaaaatcaatggaaat tcattgacatataaagcagatagtagtcaaataaagcacattcaatttttgtcatctacc gttacacaaaatataactattgatatgaatgttagtaaggaagaacttcgaaacatacaa aagaatttgtcaattatgttgtggaatgatgcagagttaaaacataatcgaccactgcag tattcgtcatctacggagctaatatgtataaatttcataattgaaggaaactgtggctgg cacacatag

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