Culicoides brevitarsis: 134835559
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Entry
134835559 CDS
T10947
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cbri Culicoides brevitarsis
Pathway
cbri03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134835559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbri03019
]
134835559
03036 Chromosome and associated proteins [BR:
cbri03036
]
134835559
Messenger RNA biogenesis [BR:
cbri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134835559
Chromosome and associated proteins [BR:
cbri03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
134835559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
134835559
NCBI-ProteinID:
XP_063706508
LinkDB
All DBs
Position
3:complement(35119717..35129748)
Genome browser
AA seq
1779 aa
AA seq
DB search
MFGGSKPTFGQPASTGFGFGSTANTTTPFGGQSTGFGQTSAFGQPANNSLFGSNTQTQGT
GLFGASTSTAFGQPNQQQGTQQTAFGGFGTPQTQTQQQSSLFGGATTQPANTSLFGASNT
AFGQAAKPTGFGGFGQPAQQNTSLFGQASTSTAGTTGFFGQQAQSGGMFGATATPAPAFG
MTTQENAGTGIVKYNLTLDSDTILVKGNQTNVSTKQHCITFMKEYQNKSLEELRLEDYMA
NRKGPQAGAATGGLFGSPQQTGGMFGSTQPSTGLFGQTSTAPATGGLFGSTTNTIGGFGQ
TNNAFGATSQQNNSLFNKPFGQTTTTQTGFGGFGTSSAATATPFGQAKPLFGTSGATTGG
LFGQTSSTFGQPAQTTTGFGTTPFGQAQTQQQQPAQQTSLFGSTQPQTSAFGSNTNTGFG
GFGTNTSQASTGIFGKPATTGFGAQPATGFGTAASTAPTLGGFGQPAQGGLFGNSLNKPA
TGFTGFGQPQTSVAPLGTTGFGQGTSLFGQNNQQKPGGFFGSNTTNQSTGLFGNTSTGFG
TGSALGGSTLGGFGLNSSLGGLGQNNTSFGAQQQQSQPIHQQILQMATSPYGDNPIYKDL
KPSSTTSDEALKVTNPAAQKAMLESLSNKYKVSPAITNAVKIKPVGQLSKKSLFDGLEEY
DASLAESFTLKPNAKRLIIKPKGSPAAKPLQESNNVSLDDSLRLRSNVVSNVSSSEKIAK
PANLDTSEKFDNVIPTVAQPPVDNGRRVSWLQTVQFDKAREPDTAMETTLRELVTGGTEK
KGATPFSPTTASQTKSVDDSDLSVGAQTPNQSILSTSQSPPVDSEKPPHPTGIVLTRQGY
YTIPSLDDLLAIMDDQGRCVVNNFTIGRRGYGNVYFNESFDVAGLNLDEIVHFRHKEIIV
YPDDENKPPVGQGLNRKAQVTLDQVWPQDKTLHEPIKDPERLQAMNFEGKLRRVCDKSDT
RFLEYRPDTGSWVFKVDHFSKYGLTDSDEEDSAPTDPKQLKLTAEAMKADKDKNGNLNKE
TENVGKLGGIQQKALLSSIYEMDQRKLGGFIADQDFTLDYMDTTNHNKSDFLSQTNPMGI
EMNNPHKLQLMKASFFADDEYDGRSVVSDTSESCGSADQIVPNRGYGRSARNYLSSGALS
SVSEDPQMDDDILTSVGSMKSSVPSEQQQQIVQMETSFQMPEGPKSLPLIIKPKIYYETG
VDMAIPLHNSFLSTLKSTKIDPIFFNGRRFKIGWGPYSTLQLPQSSELVDDKKVHISKHC
YGRRDSDYSRSFINRIQFPSNDRIEHFSESIVPHLEIELQYDAIKRDPDMECPYFSSNGG
LKALAEHEELAKTLGHLTNLDSYAASVWSLCAALWGEREELEGQDELSHNVVMFRRDMFS
EWLEDVITDADLLTIKHKNSYMDQMLDLLFCHKVADACEVAISNGDYNLSLLLSQLSGGS
AVKQLMNHQLALWQDVEADKYIEEKRLRACMIVAGLPIFESNQGVINIYDDMDWIKALAY
HLWYISSPTSSITDALYAYEDTLEKTDIEKIKPKPIYTDKYETRTEKPLKDLRHHILHLF
SKKSHPMETLLNPATHTLDPMDFRLSWLLLQTFESIGYRHTSEVTRSQIHMSFANQLENY
GLWQWAIYVLLHINERSRREAAIKSLLVRHIQFKHDPDYIKLENFIVDRLGIPETWIYFA
KAVRAGSHGFRDDQAKFLLHAKEWSMAHEVIMTHIAPNAISIFTKNFITDKIPYLKMLLK
EFKDHRKVSNWTTQGKILLDFIEINETRMNLSKPSKSSK
NT seq
5340 nt
NT seq
+upstream
nt +downstream
nt
atgtttggcggttcaaaaccaacttttggtcagccagcatcaactggattcggctttgga
agtaccgcgaatacgacaactccatttggcggtcaatcgacgggctttggacaaacttca
gcattcgggcaacctgcaaataacagtttgttcggcagtaatacgcaaacgcaaggcacg
ggattgtttggagcaagcacttcgacagctttcggtcaaccgaatcaacagcaagggacg
caacaaacggctttcggaggttttggaacgcctcaaacacaaactcagcaacaatcctcg
ttgtttggaggagcaacgacgcaaccagcgaacacgtcgttgttcggagcttcaaatacg
gcattcgggcaagctgcgaaacccacgggattcggaggttttggacaacccgcgcaacaa
aatacttcgttatttgggcaagcaagcacaagtacagcgggaacgacaggatttttcggg
caacaagctcaaagcggcggaatgtttggagcaacagcaactcctgctccggcattcgga
atgacaacgcaagaaaatgcgggaacgggaatcgtaaagtacaatctcacgctggattct
gacacgattctcgtcaagggaaatcaaacgaatgtcagcacgaaacaacattgcatcacg
ttcatgaaagaataccaaaacaagtcgttggaagagttgcgtctcgaagattacatggca
aatcgcaaaggacctcaagcaggcgccgcaactggaggtttatttggatctccgcaacaa
acgggaggcatgttcggaagtacacaaccttcgacgggactctttggacaaacatcaacg
gcgccagcgacaggcggattgttcggaagcacgacaaataccattgggggcttcggacaa
acgaataacgcttttggagcaacaagtcagcaaaacaatagtctcttcaacaaaccattt
gggcaaacgacaacaactcaaacgggattcggaggctttggaacgagttcagcagcaact
gcaacgcctttcggacaagcaaaacccttatttggaacgtcaggcgctacaacgggaggt
ctttttggtcaaacatcatcaacttttggacaaccagctcaaacaacaacaggctttggt
acaactccattcgggcaagctcaaactcagcaacagcagcctgcacagcaaacatctttg
tttggatcgacacaaccgcaaacatccgcttttggctccaacacaaatacaggctttgga
ggcttcggcacaaatacaagtcaagcatcgacgggaatttttggaaaacccgcgacaact
ggatttggcgcgcaacctgctacgggatttgggacagcagcaagtacagctccaactctc
ggcggtttcggacaacctgcgcaaggaggattgttcggaaattctctgaataaacctgcg
acaggatttacgggttttggacaacctcaaacttcggtagcgcctctcggaacgacagga
tttggtcaaggaacgtcattatttgggcaaaataatcaacaaaagcccggaggattcttc
ggaagtaacacgacgaatcaatcaacaggcttatttggcaacacatcgacgggatttggc
acgggaagtgctttgggaggcagtacattgggcggatttggcttgaattcatcgttagga
ggcttgggacaaaataacacgtcatttggcgcacagcaacaacaatctcagccgattcat
cagcaaattctgcaaatggcaacgagcccatatggcgacaatcccatatataaagacctc
aaaccgagcagtacgacgtcagatgaagcactaaaagtgacaaatcctgcggcacaaaaa
gccatgttagaatccctttcaaacaagtataaagtttcgccagcaataacgaatgccgtg
aaaatcaagcctgtcgggcaattgagcaagaaaagtttgttcgacggattggaagaatat
gatgcaagtctcgcggaaagtttcacgctgaaaccaaatgcgaaacgattgatcatcaaa
ccgaaaggaagtcccgcagcgaagcctttgcaagaatcaaacaacgtttctttagacgat
tcgttgcgtttacgttcgaatgttgtctcgaacgtgtcgagcagcgaaaaaatcgcaaaa
cccgcaaatctcgatacaagcgaaaaattcgacaatgtaattccaacagttgctcaacct
cctgtcgataacgggcgtcgtgtttcatggctccaaaccgtacaattcgacaaagcacga
gaaccagatacggcaatggaaacaacattgcgtgaattagtgactggaggcacggagaaa
aaaggcgcaactccattttcgccaacaacagcgtcgcaaacaaagtctgtcgatgactcg
gatttgtcagttggagctcaaactccgaaccaaagtattctttcgacgagtcaatcgcct
cccgttgattcggaaaagcctccgcatccaacgggcatcgttctcacacgtcaaggttac
tacacaatcccgagtttggatgatttgttggcaattatggatgatcaaggacgatgcgtt
gtcaacaatttcacaattggtcgacgaggctatggaaatgtctatttcaacgaaagtttc
gacgttgccggattgaatttggatgaaattgtccatttccgtcacaaagaaattattgtc
tatccggatgatgaaaataaacctcctgtgggtcaaggcctgaatagaaaggcgcaagta
acactcgatcaagtatggcctcaggataaaacgttgcatgaaccgataaaagatcccgaa
cgccttcaagctatgaatttcgagggaaaattgcgacgcgtttgtgacaaatctgatact
cgcttcttggaatatcgacctgacaccgggtcttgggtctttaaagtcgatcatttttcg
aaatatggtttgacagatagtgacgaagaagattcggcgcctacagatccgaaacaactc
aaattaacagcggaagcaatgaaagcggataaggataaaaacggaaatttgaacaaagaa
acggaaaatgttggaaaactcggcggaattcaacaaaaagcacttctttcttcgatttac
gagatggatcaacgaaaactcggcggttttatagctgatcaagatttcactttggattac
atggatacgacaaatcacaataagagcgattttttgagtcaaactaatccaatggggatt
gaaatgaacaatccgcacaaattgcaactcatgaaagcctcctttttcgcagatgatgaa
tatgatgggcgttctgttgtctctgatacatccgaaagttgcggatctgctgatcagatc
gtgccaaatcgcggttatggtcgaagtgcgagaaattatttgtcatccggagcgctcagt
agtgtcagtgaagaccctcaaatggatgatgacatcttaacatctgttggaagtatgaaa
tcgagtgttccgagtgaacaacagcaacaaattgtgcaaatggaaacgagttttcagatg
cctgaaggtccaaaatcccttccgctcatcattaagcccaaaatttattatgaaacgggc
gttgatatggcaatcccattgcataatagtttcttatcgacactcaaaagtactaaaatc
gatccgatattcttcaatgggagacgttttaagatcggatggggtccttacagcacatta
caacttccgcaatcatctgaactcgtggatgacaaaaaagtgcacatttcaaaacattgt
tatggtcgacgtgattccgattattcaagaagtttcataaatcgcatccaatttccaagc
aacgataggattgaacacttttccgaatcgattgttcctcatttggagatcgaattgcag
tatgacgccataaaacgagatcccgatatggaatgtccttatttttcatcgaatggaggc
ttaaaagcgcttgctgaacatgaagaactcgcaaaaactttgggtcatttaacaaatttg
gattcttacgctgcttcagtttggtctttgtgtgctgctttgtggggcgaacgtgaagaa
ctcgaaggacaagacgagttaagtcacaatgttgtcatgtttcgacgtgatatgttctcc
gaatggttagaagatgtcattacggatgctgatttgctcacaattaaacataaaaactcg
tatatggatcaaatgctcgatttgttgttctgtcacaaagtagctgatgcttgtgaagtt
gccatttccaacggggattataatttatctttgttattgtcacaactttcgggcggatca
gcagttaaacaactcatgaaccatcaattggcgttatggcaagatgtagaagctgacaaa
tatatcgaggagaaacgtttgagggcatgtatgatagttgcgggtcttccgatattcgag
tcaaatcaaggagtcatcaatatttacgacgatatggattggatcaaggctttggcatac
catttgtggtatatttcgtcgccaacgtcatcgataacggatgcattgtacgcttatgag
gatacattggagaagacagacatcgaaaagatcaaaccgaaaccaatttacacagataaa
tatgaaacgcgtacggaaaaacctttgaaggacttgagacatcatattttgcatctattt
tccaagaaatcacatccaatggaaacacttttgaacccagcaactcacactttggatccc
atggacttccgtttaagttggcttttgctccaaaccttcgaatctatcggatatcgacac
acaagtgaagttactcgatcccaaattcacatgtcctttgccaatcaactcgaaaattac
ggtttatggcaatgggcaatttacgtattacttcacatcaatgaacgaagtcgacgtgaa
gctgctatcaaaagtcttcttgtgcgtcacattcagttcaaacatgatccggattacatc
aaattagaaaatttcattgtcgatcgtttgggaattcctgaaacgtggatttatttcgcg
aaagctgtacgtgctggaagtcacggattccgcgatgatcaagcaaagttccttttgcat
gcgaaagaatggtcgatggcacatgaagtcatcatgacacatattgctccaaatgcaatt
tcgatttttactaaaaattttattacagataaaatcccgtatctgaaaatgcttttgaaa
gaattcaaagatcaccgtaaagtatcaaattggacaacgcagggaaaaattctgctcgac
ttcattgaaattaatgaaactaggatgaatttgagcaaaccctcgaagagctcaaagtaa
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integrated database retrieval system
