KEGG   Culicoides brevitarsis: 134835625
Entry
134835625         CDS       T10947                                 
Name
(RefSeq) probable nucleoporin Nup54
  KO
K14308  nuclear pore complex protein Nup54
Organism
cbri  Culicoides brevitarsis
Pathway
cbri03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cbri00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    134835625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbri03019]
    134835625
Messenger RNA biogenesis [BR:cbri03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     134835625
SSDB
Motif
Pfam: Nup54 Nup54_C Nucleoporin_FG DUF4081
Other DBs
NCBI-GeneID: 134835625
NCBI-ProteinID: XP_063706602
LinkDB
Position
3:18952514..18954477
AA seq 556 aa
MAFSFGATSTPAKPATGFGQNTTFGFGNTSTFGAAPAAATTTVPSLFGATNTNTFGTSTF
GQATATTSAPSLFGTQQPATNTGLSLFGQTNTAFGQPQQQQQQPTLTGFGQKPAGTAWPA
FGSTTTTSQPSTGFGTGTSFGGFGTTFGQNTTQQQQMQQQQQLNVPQMSADEQFLNAVFN
VSIFGDERDATVAKWNHLQAMWGVGKAFYSNQPPVEIDQQNLLSRFKTMGYSKLSGKDNK
AGLIAINFNKPVAQVKDTQQQVVNTLTQIFGNKPNLSVHVESTKPLSDTKSQLIFYVQEK
SATNETRKIPSQEVYAFINGQTMSKQQLTNLGVENIFPFVLPDEDQLKEYLENPPKGIDR
RMWNQAREDNPDPKKFIPVPMIGFNDLKWRIKCQENETDAHALYLQKVEKDLNALKQRHA
NTSAKIMEHRRKLSELSHRVLKIIVKQESTRKMGIGLSAEEEAIRTKLDNMHIIVSAPTQ
FKGRLSELLSQTRMQRNQWRMVGSGNEYTLDKDAQEEMKSFLTMQQKAMAHVIDIANKDL
ADLKIIQEGITRLVQS
NT seq 1671 nt   +upstreamnt  +downstreamnt
atggcattttcctttggagcaactagcaccccagcgaaaccagctacaggttttggtcag
aacacaacttttggtttcggtaacacgagtacttttggagctgcaccagctgctgctaca
acgaccgttccatcactttttggagcaaccaatacaaacacattcggaacatccactttt
ggacaagcgacagcaaccacatctgctcccagtttattcggaacacaacaaccagctaca
aatacgggactttcgctctttggtcagacaaatactgcctttggacaaccgcagcagcag
caacaacaaccaactctcacgggattcggtcaaaaaccagctggcacagcatggcccgcc
ttcggaagtaccacaacgacatcgcagccgagcacgggttttggcacgggaactagtttt
gggggtttcggcacgacttttggtcaaaataccacgcaacaacaacaaatgcagcagcag
cagcaattaaatgtccctcaaatgtcggcagacgagcaatttttgaacgctgtcttcaac
gtttccattttcggcgatgaacgcgacgccacagtcgccaaatggaatcacttgcaggcg
atgtggggtgtcggaaaggcattttactcgaatcagccgcccgtggaaattgatcagcag
aatttgttgtcgcgtttcaagacaatgggctacagtaagcttagcgggaaagacaacaaa
gccggattgattgcgattaatttcaacaaacccgtggcacaagtcaaggacacgcaacaa
caagttgtcaacactttaacgcagatttttggtaacaaaccaaatttgagtgttcatgtt
gagagcacaaaacccctctccgacaccaaaagtcagctaattttttacgtgcaagaaaaa
tcggccacaaatgaaacgcgaaaaattccatcgcaagaagtttatgccttcatcaacggt
caaacgatgtcgaaacaacaactcacaaatctcggtgtcgaaaatatctttccctttgtg
ttgccggacgaagaccagttgaaggaatatctcgaaaatcctccaaaaggcatcgatcgt
cgcatgtggaaccaagcccgcgaagacaacccggacccgaaaaagttcattcctgtcccg
atgatcggtttcaacgatctcaagtggcgcatcaagtgtcaggagaacgaaacagacgct
catgctttgtatctgcaaaaagtagaaaaagatttgaatgccctcaagcaacgtcatgcc
aacacttcggccaaaatcatggaacatcgcagaaaattatcggaactcagtcatcgcgta
ctgaaaattatcgtcaaacaggaaagtacgcgaaaaatgggcatcggattgtcggctgaa
gaggaagctattcgcacgaaactcgataacatgcatataattgtctcggctccgacgcag
tttaagggacgtttgagcgaattgttgtctcagacacgcatgcaacggaatcaatggaga
atggtgggcagcggaaacgaatatacgctggacaaagatgcgcaagaggagatgaagagt
ttcctgacgatgcagcaaaaggcgatggcgcacgttatcgacattgccaataaagatttg
gcagacttgaaaatcattcaagagggaatcacgcgtcttgttcaatcataa

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