Culicoides brevitarsis: 134835719
Help
Entry
134835719 CDS
T10947
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
cbri Culicoides brevitarsis
Pathway
cbri03013
Nucleocytoplasmic transport
cbri03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134835719
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
134835719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbri03019
]
134835719
Messenger RNA biogenesis [BR:
cbri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134835719
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
SDA1_dom
Motif
Other DBs
NCBI-GeneID:
134835719
NCBI-ProteinID:
XP_063706714
LinkDB
All DBs
Position
3:27183508..27193239
Genome browser
AA seq
1695 aa
AA seq
DB search
MMSTEASFDEDNHGQTNDSIITKVKSRVSNIFPSVANWFSSPGPSTNNGSVRRRRDSESE
SDDEGNANTSLPQSKRRRSDVTTHQTNTPSAAPSNPRRLSMPVNATPADQLMRNRLAGRQ
QTQQMTSSPYDFAARNPSMTLMASPIQIRDSEDEEEDEEEEETDEVQLVQQEETVTKRKG
IHETQYNVLRMSSQQGDRSTSEPPTAPTAGPSSRVHRFGYGLQSEVIPENSSFQNGNDEA
TSETSDFTQPRASRPGRLSGFLGNRNKNMSASTGQLSFQAHLETEKSLFANEQRRQFNPS
LYGSSWSLNSGGSGSRFHRNFSPFYGGQTMYGGAAAYSRRDNRLQQTLRVPTLIRPSSRL
SNASSSSSLASVGDGSNQSNAANSTTGLSNTSKRILELLNQCTSPLKDARKMGTGLNTSV
RVPSLMNNSTSLSRAGRFNDADLNASRSIRLTQPKTPYSRPTAPLPPTSELQIPSISQLL
QMKRLLNSTAEVKKLADQSKSALNQVSEYTLPGGDQNSSSSTNKYTNKVKEKLTSTRDKQ
NAADVAPQPVNLPNIQLPNLKSVPKFDIAIPEQKSVISNNSSKDKSTNVFATLNFGNNNK
STKKDDDVIEIDDDDDEDEEEDDEEEEDDESDDEDDENDEDQDENTQESTGSNSNGSMQF
KFSSPVPILSKQVPANPSDSCKNFKFSSPLAVGAPALEVLKPDMTLAKKKLESPVVAAKE
KPEGIAVASELKAGSCLDALFGKKADASLPMGTPMGFGSQFKMASTQWECPACMIRNDNA
NEKCVACNSAKPGGAKNAAPQKEATLKTTDSGFASLLAAQKAKWECPACMSQNDQSAEKC
PACTEPKPGSKPKPAETTTAPAVPMDNAFKKLVEQQKASKWECKSCLTQNDQNSTKCACC
EEAKPGSAPEKVPQFSFSSGSTTSKFSFGVPKDAAAATSTAPQSSFVFGSVAKPAGNAET
APNKGFSFGTTVTKADTAAKPTFSFGVPAAASTTTSTSKATTDAVSSSTVNSTPGGFSFG
VSSSIAPKTEAISSTADTSSPRLNKRTLDETDSTSKVSATTFTFGKTNEAQAKPAFSATT
TSTFGSLASSTNNTVSSSGGFSFQKVTSPAVTTASATKDDSSSQISSTATTNAITTPIFG
SGVSGIKPLDRSFGGIKPATTVNDDASKKGTLIFGAAKKDEGIKPSTGGFTFGQSSTTAT
SKPADQPTSSIFGGAAALGKPETKPGFSFMTPAAEKPAATPTATSQENKPTFGMFGNAAN
NSPKTTTFGFGANTEQQKPEAPKPVFGASTFGNASDANKSVFGAAPAATTPAASPFVFGS
AQSGFNSSNTQQQQQQQQPTPLSGTPSSFGSSTPSSNIFGSANNSPASVFGQPSTENKLP
AFGASNAFGSSNLFGANAATARSASSASSPFGDANDEPNNKKLNTGGFQFNAQGPNTSST
GSAAGSPFVFGSASATPSMDNNNSKGAFSFTPEVKPTFNFSANAGMGSNNPTSTTATNVP
YQFGSTPPGVFAFGATPVLESRTVGGHATTSQNQGNETHSAVKAAPRRDLVWINPSIKQQ
LQSHIHRNMSRKRNLESLAVNNVRNHFRDNNNSTKTTTSSTDNNNLTTTLTSTSATVAEK
RSDDEIFVKPQNTARKFIKRNPQERRPIYDRSKFKYLAPSHNTKLMNNNNTTSDNTLLIS
DSPTNNSTEEQKNNF
NT seq
5088 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcaacggaggcgagtttcgacgaggataatcacgggcagacgaacgactcgatc
atcacaaaggtcaagtcgcgcgtttccaacatatttccaagtgtggcgaattggttttcg
tcgccgggcccctcgacgaacaatggcagtgttcgtaggcgccgcgattccgagtcagag
agcgacgacgagggaaacgcaaatacttctcttccgcagagcaaacgtcggagatcggat
gtgacaacacatcaaacaaacaccccgagcgccgctccaagtaatccgcgacgactttcg
atgccagtaaatgcgaccccagcggaccaattgatgcgaaatcgacttgcaggaaggcaa
caaacacaacaaatgacctcgtcgccatacgattttgccgcgcgcaatccttcgatgacg
ctaatggcgtctcccatccaaatccgggactccgaggacgaagaagaggatgaggaagaa
gaagaaacggacgaagttcaattggtgcaacaagaggaaacggtaacaaaacgcaaaggc
atccacgaaacgcagtacaatgtgttacgaatgagcagtcaacaaggcgatcgttcgact
tcggagccaccaacggcgcccacagctggtccatcatcgcgggtgcatcgtttcggctac
gggttgcaatcggaagtcattccggaaaattcctcctttcaaaacgggaatgacgaagca
acaagtgagacgtcggatttcacgcaacctcgggcatcacgacccggacgcttgtcgggc
tttttggggaatcgcaacaaaaatatgagcgcatccacgggtcaattgtcgttccaggcg
catttagagaccgaaaaatctcttttcgccaacgagcaacgtcgtcaattcaatccctcg
ttgtacggcagtagttggtccctgaacagtggcggcagcggaagtcgttttcatcgaaat
ttctcgcccttttacggaggtcagaccatgtacggaggtgctgctgcctactcgcgacgc
gataatcgcttgcaacaaactttgcgcgtgcccacattgattcgtccgtcgtcgcgtctc
tcgaacgcttcgtcaagcagctccttggcatccgtgggcgatggcagcaatcaatcgaat
gccgcaaattcaactacgggactctcaaatacctcaaaacgcattctggagctgctgaat
cagtgcacgtcgccgctgaaggatgcccgaaagatgggcacgggactcaatacgtcagtt
cgggtgccgagtctcatgaataacagcacgagcctgagtcgtgcgggacgctttaatgac
gccgatttgaatgctagtcgcagtattcgactgacacaaccgaaaacgccttacagtcga
ccaacggctccgttaccgccgacgtcggagctgcaaattccctcgatttcgcaactgctg
caaatgaagagattgctcaatagcacggcggaagtcaagaaactcgcggatcaaagtaaa
agtgcactcaatcaagtgagcgaatataccttgccaggcggagatcagaatagtagtagt
agtacaaacaaatacacgaacaaggtcaaagaaaagctcacaagcactcgtgacaagcaa
aatgctgctgatgtcgccccccaacccgtcaacttaccaaacatacaattgcccaacttg
aaatctgtcccgaaattcgacattgcgatcccggaacaaaagtccgtcatatcaaacaac
tcatcaaaggacaaatcaaccaacgttttcgcaacactcaactttggtaacaacaacaaa
tccactaagaaggacgatgatgtcatcgaaatcgacgacgacgacgacgaagatgaagaa
gaggatgacgaagaagaagaagacgacgaaagtgacgatgaagatgacgaaaacgacgaa
gatcaagacgaaaacacgcaagagagcaccggcagcaacagcaacggctccatgcaattc
aaattttcctcacccgtgccaattctcagcaagcaagttcctgcaaatcccagtgatagt
tgtaaaaatttcaaattttcgagtccgttggctgttggcgcaccagctcttgaagtgctg
aagcccgacatgactttggcaaagaaaaaactcgaatcgcccgttgtcgcggcgaaagaa
aagcccgaaggaattgccgtagcgtctgaactcaaagcgggaagttgcttagatgcgctt
ttcgggaaaaaagctgacgccagtctcccaatgggaactcccatgggcttcggatcgcaa
tttaaaatggcctcgacgcaatgggaatgcccagcttgcatgattcgcaacgataacgcc
aacgaaaaatgcgtcgcttgcaacagcgccaagccaggcggagccaaaaatgcggcgcca
caaaaagaagccacgctcaaaacgacagattcgggctttgcatcacttcttgccgcccaa
aaagcaaaatgggaatgcccggcgtgcatgtcacagaatgaccaaagtgccgaaaagtgt
cctgcctgcaccgaaccaaagcccggaagtaagccgaagccggcggaaacgacaacagcg
cccgctgtgcccatggataacgcctttaagaagttggtggaacagcaaaaagcctccaag
tgggaatgtaagtcttgtttaacgcaaaatgaccaaaattcaacgaaatgcgcgtgttgc
gaagaagcaaaacccggaagtgcgcccgaaaaagtgcctcaattctcgtttagttcggga
tcgacgacgtcaaaattctcgtttggcgtaccaaaagacgctgcagcagcgacaagtact
gcaccccaatcgagtttcgtctttggaagtgtcgccaaacccgcaggaaatgcagaaaca
gcgccaaataagggattttcgttcggaacgacagtcacaaaagcagatactgctgcgaaa
ccaacattttcgttcggagttcctgccgctgcttcaacgacaacgtcaacgagcaaagcc
acaactgatgcggtgagcagttcaaccgtcaatagcactccaggcggctttagtttcggt
gtgtcatcaagtattgctcccaaaacggaagcaatttcgtcgacagcagacacttcgagt
cctcgtttgaacaaaagaacgctcgatgaaacggattccacgtcaaaagtatccgcgaca
acttttacttttggcaaaacgaacgaagcgcaagcaaaaccagcattttcggcgactaca
acttcaacttttggcagtttagcgtcttcgacaaacaacacagtttccagttcgggcgga
ttttccttccaaaaggtcacgagtcccgcagttaccacggcatctgccacgaaagacgat
tcctcgagtcaaattagctcgacggcaaccacgaatgccattacaacgcccattttcgga
agcggagtgtcaggtattaaaccgctagatcgctcctttggcggaataaagcccgcaaca
accgtcaatgatgatgccagtaagaagggaactttgattttcggggctgcgaagaaggat
gaaggcataaaaccatcaacgggaggctttacgttcggtcaatcgtcgacaacggcgact
tcgaaacccgcagatcaaccaacaagttcgattttcggaggtgcagctgctttgggaaag
cctgaaacgaaaccgggattttcttttatgactccagctgccgaaaaacccgccgccacg
ccaacagcgacgtcacaagaaaacaaaccaaccttcgggatgtttggaaatgccgcgaat
aacagtccaaaaacgacgacattcggttttggcgcgaatacggagcaacaaaagcccgaa
gcgcccaaacctgtgttcggagcaagtacttttggaaatgcctcggatgcgaataaatcc
gtttttggagcagcgccggcagcaacaacgcccgctgcgtcgcctttcgtctttggaagt
gcgcaatcgggtttcaacagctcgaatacgcagcaacaacaacaacaacaacagccgact
ccgttatcgggcaccccaagcagttttggatcgtcaacaccttcgtcgaatatcttcgga
agtgctaataattcgccagcatcagtttttgggcaaccatcgacggaaaataaattgcca
gcatttggcgcctcgaatgcatttggaagttcgaatctttttggagcgaatgcggcaaca
gcacggagcgcaagtagtgcgagtagtccgtttggggatgcgaatgatgagccaaataac
aagaaactcaataccggagggttccaatttaacgctcaaggacctaatacgtcgagtacc
ggaagtgcagcaggctcacccttcgtctttggaagtgccagcgccacaccaagcatggac
aacaacaactcaaaaggagctttcagctttacgccggaagtcaaaccgacatttaatttc
tctgcaaatgccggcatggggtccaataatcccacatctacgactgccactaacgttcct
taccaatttggatctacgcctccaggcgttttcgctttcggagccacgccagttcttgaa
tcccggacagtcggtgggcatgcaacaacgtcgcaaaatcaaggcaacgagacgcatagt
gcggtaaaggccgctccccgtcgcgatctcgtgtggataaatccttccatcaagcaacaa
ttgcaatctcatatccaccgtaatatgagtcgcaagcgaaatttggagtcacttgctgta
aataatgttagaaatcactttagagataataataatagtactaagacaacaacgtcatcg
actgataacaacaacttgaccacaacgttgacatcgacatctgctacagtggcggagaaa
cggagcgacgacgaaattttcgtaaagccacaaaataccgcgcgaaaattcatcaaacgt
aatccgcaggaacgtcgaccaatttatgaccgttcaaaattcaaatatttagcgccctcc
cacaacacaaaattgatgaataataacaatacaactagcgataatactttactaattagt
gatagtcctacaaataattctacagaggaacagaaaaataatttttag
DBGET
integrated database retrieval system
