Culicoides brevitarsis: 134835777
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Entry
134835777 CDS
T10947
Name
(RefSeq) RNA-binding protein squid isoform X1
KO
K03102
squid
Organism
cbri Culicoides brevitarsis
Pathway
cbri04320
Dorso-ventral axis formation
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09150 Organismal Systems
09158 Development and regeneration
04320 Dorso-ventral axis formation
134835777
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbri03019
]
134835777
03041 Spliceosome [BR:
cbri03041
]
134835777
Messenger RNA biogenesis [BR:
cbri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
134835777
Spliceosome [BR:
cbri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
134835777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_DEAH11
AICARFT_IMPCHas
Motif
Other DBs
NCBI-GeneID:
134835777
NCBI-ProteinID:
XP_063706802
LinkDB
All DBs
Position
3:4797828..4813537
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AA seq
336 aa
AA seq
DB search
MSEQEQNSQNGQDFTQDVKDGEDVQMNGNGNSDNQNGPPARDDDRKLFVGGLSWETTEKE
LRDHFGQYGEIENINVKTDPNTGRSRGFAFIVYKSAEALDKVSNAGDHIINNKKVDPKKA
KARHGKIFIGGLTPEISDDEIKTFFGQFGNIVEVEMPFDKQKNQRKAFCFITFDSEQVVN
ELLKTPKQTIAGKEVDVKRATPKDGNAPGGFPMGPGGRFQRGAGPRGGPGGRGGKFGGQW
GNQGYPPYGQYGGGQPPYYEGYGYNQGYYDYDQYGGYYSGYPNYANGGSDLPKPKYGDYN
YGGGYGGRSGPRGGGKGGPGFQGKQRGGRPQRHQPY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaacaagaacaaaactcacaaaatggccaagacttcacgcaagacgttaaagac
ggcgaagacgttcaaatgaatggcaatggaaactctgacaaccagaatgggcctccagct
cgtgatgatgacagaaaattattcgttggaggtctcagctgggaaacaactgaaaaggaa
cttcgtgatcatttcggacaatacggcgaaatcgaaaacattaatgtcaaaaccgatcca
aacacgggtcgctctcgcggctttgcatttatcgtctacaagtcagctgaagctttagac
aaggtctccaatgctggcgatcacatcatcaacaacaagaaagtcgacccgaagaaggcg
aaggcacgtcacggcaaaatcttcatcggcggcttgacacccgaaatcagcgacgacgaa
atcaagacgttcttcgggcaattcggcaacattgtcgaagtcgagatgccatttgacaag
caaaagaaccaacgcaaagccttctgcttcatcacgttcgactcggagcaagtggtgaac
gagttgctgaagacgcccaaacaaacgatcgccggcaaggaagtcgacgtaaagcgtgcc
acaccaaaggacggaaatgctcccggcggtttccccatgggacccggaggacgtttccaa
cgcggcgccggaccacgcggaggtcccggaggacgaggcggcaaatttggcggacaatgg
ggcaatcaaggatatcctccatacgggcaatacggaggcggtcaacctccatactatgaa
ggatacggttacaatcagggatattatgattatgatcaatacggtggatattacagtggc
tatccaaattatgcaaatgggggatctgacttgccgaaaccaaagtatggtgattacaac
tacggcggcggttatggagggcgttcaggcccacgaggcgggggcaaaggcggtccagga
tttcaaggaaaacaacgcggaggtcgtcctcaaagacatcaaccttattaa
DBGET
integrated database retrieval system
