KEGG   Culicoides brevitarsis: 134835813
Entry
134835813         CDS       T10947                                 
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 3B subunit 1
  KO
K12828  splicing factor 3B subunit 1
Organism
cbri  Culicoides brevitarsis
Pathway
cbri03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cbri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    134835813
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cbri03041]
    134835813
   03036 Chromosome and associated proteins [BR:cbri03036]
    134835813
Spliceosome [BR:cbri03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    134835813
 Complex B
    134835813
 Complex C
   U2 SnRNP specific factors
    134835813
Chromosome and associated proteins [BR:cbri03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    134835813
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 XMAP215_CLASP_TOG Condensin2nSMC CEP104-like_TOG DUF2298
Other DBs
NCBI-GeneID: 134835813
NCBI-ProteinID: XP_063706853
LinkDB
Position
3:34805197..34812514
AA seq 1320 aa
MGDRKFTHEDIESQIRDIQEKKKQLDKQAESDKGVGLLESGYFDSELYESTNTNSKYEGY
VTSIAPNEEEDDEEDEGIPLQGKRSVNAPAALLNDVAQTDKEYDPFAGRRRLTIAEKEDE
YRQRRRLQIISPERIDPFADGGKTPDVGSRSYTEIMREQRLKGEEAELRKKIQEKSKEGT
LKISASENGSSAPKRRGRWDQTVEDAFVPAKKSAAGAATPTWDGDKTPADHRWDETPHHK
GNETPSTPAARMWDPTPAHQTPGRQAGGAETPAHEKSTRRNRWDETPKTERETPGHNSGW
AETPRTDRIEADKVIESGTPGTASKRRSRWDEMTPSMATPSGMGATPQMTPSMTPGATPG
HATPLMTPGGTTPVGHKAMVMATPTPGHLASMTPEQLQAYRWEKEIDERNRPFSDEELEA
MFPPGYKILPPPAGYIPLRTPGRKLLATPTPIAGTPVGFFMQKETEQVAKFADNQPKGNL
PFMKPEDAQYFDKLLVDVDEESLSPEEQRERKIMKLLLKIKNGTPPMRKAALRQITDKAR
EFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLID
EDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSL
LPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLKSLVEIIEHGLVDDQQKVRTI
TALALAALAEAATPYGIESFDSVLKPLWKGIRTHRGKGLAAFLKAIGYLIPLMDAEYANY
YTREVMLILIREFQSPDEEMKKIVLKVVKQCCATDGVEAQYIKEEILPHFFKFFWNHRMA
LDRRNYRQLVDTTVEIANKVGASEIITRVVDDLKDENEQYRKMVMETIEKIMGNLGADDI
DSRLEEQLIDGILYAFQEQTTEDVVMLNGFGTIVNQLSKRVKPYLPQICGTILWRLNNKS
AKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVI
GMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLE
LLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCR
PFTVLPALMNEYRVPELNVQNGVLKSLSFXFEYIGEMGKDYIYSVCPLLEDALMDRDLVH
RQTACAAIKHMALGVYGFGCEDALVHLLNYVWPNIFETSPHLVQAFMDAVEGLRVALGPI
KILQYTLQGLFHPARKVRDVYWKIYNSLYIGAQDALIAGYPRIQNDPKNAYIRYELDYHL
NT seq 3963 nt   +upstreamnt  +downstreamnt
atgggggatcgtaaatttacgcacgaagatatcgagtcacaaatccgtgacatccaggag
aaaaagaaacaattagacaagcaagccgaaagtgacaaaggcgtcggattgctcgaatct
ggatattttgacagtgaattgtatgaatcgacaaatacaaacagcaaatatgagggatat
gtcacttccatcgccccaaatgaagaagaagacgatgaggaagacgaaggaattccgttg
caaggcaaacggagtgttaatgcgcctgctgctttgttaaatgatgtcgctcagaccgat
aaggaatatgatccattcgcgggacgtcgtcgcctgacaattgctgaaaaagaagatgaa
tatcgtcaacggagacgcttgcaaatcatctcgcctgagagaattgatccctttgctgac
ggtggcaaaactcccgatgttggctccagaagttacacggagatcatgcgagagcagcga
ctcaaaggagaagaagctgaattacggaagaaaattcaagaaaaatcgaaagaaggaact
ttgaagatcagtgcatcggaaaatggttcatcagctcctaaacgtcgaggtcgttgggat
caaactgtagaagatgcttttgttcctgcgaaaaaatccgcagctggagctgctactccg
acatgggatggcgataaaactcccgcagatcatcgttgggacgaaaccccgcatcacaaa
ggcaatgaaacgccttcgacgcccgcagctcgtatgtgggatccaacgccggcccatcaa
acgcccggaagacaagcggggggcgcagaaactcccgcacacgagaaatcaactcgccga
aatcgttgggatgaaactcccaaaacggaacgcgaaactcccgggcataatagcggatgg
gcagaaactccgcgtacagatcgcattgaagccgataaagtaattgaatcaggaacgccg
ggaacagcgtcaaaaagacgttcgcgatgggatgaaatgaccccgagtatggcaacgcct
tccggaatgggagcaacgcctcaaatgacgccaagtatgacgccgggagctactccggga
catgcaacgcctttaatgacgcccggaggtacaactcctgttggtcacaaagcgatggtt
atggcaacgccaactccgggacatttggcttcaatgacacccgaacaacttcaagcatat
cgttgggaaaaagaaatcgatgaacgaaatcgccccttttccgatgaagaattagaagcc
atgttcccgccaggttacaaaattctccctccgcctgcgggttacatccctcttcgtacg
ccaggtcgaaaacttctcgccacgccaactccaatcgccgggactcccgtcggtttcttc
atgcaaaaagaaacggaacaagttgcaaaattcgctgacaaccaacccaagggaaatttg
cccttcatgaaacccgaagatgcgcaatatttcgacaaattacttgtcgatgtcgacgaa
gagagtttgagtcccgaagagcaacgcgagcgaaaaatcatgaaattgctgttgaaaatc
aagaatggaacacctccgatgcgaaaagcagcattgcgtcaaataacggataaagcacgt
gaattcggagctggcccgctattcaatcaaattttgccgttattgatgagtccaacgttg
gaggatcaagaaagacatttgttggtgaaagttatcgatcgaattttgtacaaattggat
gatttggtgcgtccatatgtgcataaaattctcgtcgttattgaacccttgctgattgac
gaggattattacgctcgtgtcgaaggtcgagaaattatctcgaatttggcaaaagcagct
ggattagctacgatgatttcgacaatgagacccgatatcgacaacattgacgaatatgtg
cgaaacacaacggcacgagcttttgctgttgtcgcatcagctttgggaatcccgtcgttg
ttacctttcttgaaagctgtttgcaaaagtaaaaaatcgtggcaagctcgacacactggc
atcaaaatcgtacaacaaatcgccattttaatgggttgcgcaattttgccgcacttgaaa
tcgctcgtagaaattattgaacacgggctcgttgatgaccaacaaaaagttcgtacgatc
acagctttggcattagcagcattggctgaagctgcaactccttacggtatcgaaagtttc
gattctgtgcttaaacctttgtggaaaggtattcgaactcatcgcggtaaaggtcttgcc
gcctttctcaaggcaattggttatttaattcccttaatggatgccgaatacgcgaattat
tacacgcgagaagtaatgttgattctaattcgagagtttcagtcgcccgatgaggaaatg
aaaaagatcgtattgaaagttgtgaagcaatgttgcgctacagacggtgtcgaagcccaa
tatatcaaagaagaaatcttaccacactttttcaaatttttctggaatcatcgtatggca
ttggatcgtcgtaattatcgacaactcgtcgatacaacagtcgaaattgccaacaaagtc
ggtgcttcggagattataacgcgcgttgttgacgacttgaaggacgaaaatgagcagtat
cgtaaaatggtgatggaaactatcgaaaaaatcatgggcaacttgggcgctgacgacatc
gactcacgtttggaggaacaattaatcgacggaatcctgtatgcgttccaagaacaaacg
acagaagatgtcgtcatgttaaatggctttggaacgatcgtaaatcaactgagtaaacgt
gtgaaaccatatttaccccaaatttgcggtacaattttgtggcgtttgaacaacaaatcg
gcaaaagtacgacaacaagctgccgatttgatctctcgtatcgcagtcgtgatgaaaacg
tgtcaagaagagaagctcatgggacatttgggtgtcgtgctgtacgaatatctcggcgaa
gaatatcccgaagtacttggatctatcttgggagcacttaaagcgatcgtcaatgtcatt
ggaatgacaaaaatgacaccgcccatcaaggatttgcttccgcgtctcacgccaatcttg
aaaaatcgtcatgagaaggtgcaggaaaattgtattgatctcgttgggcgtatcgcagat
cgaggacccgaatatgtctcggctcgggaatggatgcggatctgtttcgagttgctcgag
ttacttaaggcacataaaaaagccattcgacgtgcgacagtcaacacttttggttacatc
gccaaagctattggacctcacgatgttctcgccacacttttgaacaacctaaaagtgcaa
gagagacaaaatcgtgtttgtacaacggttgctattgccattgttgcggaaacgtgtcgc
ccattcaccgttttgccggctctcatgaacgaatatcgcgtgcccgaactcaacgtacag
aatggcgttctcaaatccttatcttttntcttcgaatacatcggcgaaatgggtaaagat
tacatttactccgtttgtccgttgctcgaagatgctttgatggatcgcgatttggtgcac
agacaaacggcatgtgcagccattaaacatatggcattgggcgtttatggtttcggatgc
gaagatgctctcgtgcatttattgaattacgtttggcccaatatttttgagacgtcgccg
catttggtgcaagcgttcatggatgcggtcgagggattgcgtgtcgcattgggacccatt
aaaattcttcaatacacactccaaggacttttccatccggcgcggaaggtacgagatgtt
tattggaaaatttataattcgctttacattggggcacaagacgcacttattgcgggatac
ccgaggatacaaaatgatcccaaaaatgcatacattcgatatgaattggactatcacttg
tag

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