Entry |
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Name |
(RefSeq) probable ATP-dependent RNA helicase DDX10
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KO |
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Organism |
cbri Culicoides brevitarsis
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Brite |
Enzymes [BR:cbri01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134836161
Ribosome biogenesis [BR:cbri03009]
Eukaryotic type
90S particles
Helicases
134836161
|
SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
3:complement(32488084..32490613)
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AA seq |
802 aa
MQDKRKPFKKKGKFQPAFKKKKSQSSLEDEEIKNLRAKYDNVDLTKVKTFADLPLSKKTL
KGLKESNYTIPTEIQKQAIPNSLLGKDILGAAITGSGKTLAFLIPVIERLFMQKWTRMDG
VGAIIISPTRELAHQIFETLRKIGRYHDFSAGLIIGGRNLKFESGRMDQMNILICTPGRL
LQHMDENSLFNCTSMQILVLDEADRCLDLGFSQTMNSIIENLPPGRQTLLFSATQTKDVK
DLARLSLVSPVYVAPHEQSEFSTPMSLQQNYVVMELEDKIAMLWSFLKNHPRQKILVFMA
TCKQVKYVYEIFQKLRTSHQLFALYGTLSQHRRTNIYEEFVRKTNVCLFATDIASRGLDF
PVVNWVVQLDCPEDAKAYIHRAGRTARHTAKGENLLVLTPSEEEPMLEELKAAKIPINRI
SIDQKRLFNPRAKMEAYLAANTELKESAQRAFVNYFKSIALMKNKKIFKVESIDPDSFAR
SLGLMITPRVRFLQRLKKLKKGNNEESDDEEDEKSDRRAKNGRQEAPSLNKIMSFDSDSG
SEDDLITVKRTNHEIENELDDDETPLVDLHATKQKKAVTKAALAKKIQKKQIIPNRKTLF
DDDGNMITNTSKVLQSEMAREYENDNEAGINIEKARRLLQEEDKFDKQRFKELIQKKHKE
IKKKAKLAEKDDDDDQQEQDDFGTDSEEDQPDLSWLPDPDKVYKGRHSTFESDEEFDARV
ATGSSSEESSDEEPIEAIHKPPTKLVTKKVGKKRQLEDDSESDSAPPVENDSKKSKKKPK
TKEIVENLSLNEAEQLAMQLLG |
NT seq |
2409 nt +upstreamnt +downstreamnt
atgcaagacaaacgaaaaccctttaagaaaaagggtaaattccaaccggcgttcaagaaa
aagaagtcacagagcagtttagaggacgaagagataaaaaatttgcgtgcaaaatacgac
aacgttgatttgaccaaagtaaaaacctttgctgacttgccgctgtccaaaaaaacgcta
aaaggtttaaaggagtcaaattacacaattcccacggaaattcaaaaacaggccattcca
aactccctgctcggcaaagatatcttgggagccgccatcacaggcagcggaaaaacctta
gcgttcctaattcccgtcatcgaacgactttttatgcaaaaatggacccgcatggatggc
gtcggagcaattatcatctctcccacgcgcgaattagcccatcaaatcttcgaaacactt
cgaaaaatcgggcgatatcacgatttttcggcaggtctcatcatcggagggcgaaatttg
aagttcgaaagcggtagaatggatcaaatgaacattctgatttgcactccggggcgtttg
ctacaacatatggacgaaaattccctttttaattgcacttccatgcaaattttagtgtta
gatgaggctgacagatgcttggatctgggtttttctcaaacaatgaactcaattatcgag
aatttgccgcccgggagacaaactttgctgttttcggcgacacaaacgaaagatgtgaag
gatttggcacgcctgagtcttgtcagtcccgtttatgtagcaccgcatgagcaatcagag
tttagtacgccgatgagtttgcagcaaaattacgtcgtgatggagttggaagacaaaatt
gcgatgttatggtcgtttttgaagaatcatccacgtcaaaaaatcttagtttttatggcg
acatgcaaacaagtgaagtacgtttatgaaatttttcaaaaattaaggacttcgcatcaa
ttattcgcgctgtacgggactttgtcgcaacatcgacgcacaaatatctacgaagaattc
gtgcggaagacaaatgtttgcttatttgcgaccgatattgcgtctcgtggtttggatttt
cccgtcgttaattgggttgtgcagttagattgccccgaagatgccaaagcgtacatccat
cgagccggtagaacagctcgtcataccgcaaaaggtgaaaatttgctcgttttgacacca
agtgaagaggaacccatgctggaagagttaaaagcagcgaaaattccaataaatcgcatc
tcgatcgaccaaaagagactttttaatccgcgagcgaagatggaagcatatctcgccgca
aatacggaactcaaggaatcagctcaacgggctttcgtgaattatttcaagtcgatcgct
ttgatgaaaaacaagaaaattttcaaagtcgagtctattgatccggatagtttcgccaga
tctcttggtttgatgattacgcctcgtgtacgattcctgcaacgactgaagaagctgaaa
aagggaaataacgaagaatctgacgacgaagaggacgaaaaaagtgatcgtcgtgccaaa
aatggacgacaagaagctccgtcactcaacaaaatcatgtcctttgactcagattcgggc
tcggaagacgacttgatcaccgtaaaaagaacaaatcacgagatcgagaacgaattggat
gacgacgagacgcctttggttgacttacatgcgacgaaacaaaagaaagctgtcacaaaa
gcagctttggcgaagaaaattcagaagaaacaaattattccgaaccgaaaaacgctcttt
gatgatgacggcaacatgataacgaacacttcgaaggtactccagtcggaaatggcgcgc
gaatatgaaaatgacaacgaagcaggcatcaatatcgaaaaagcgcgacgtttgttgcaa
gaagaagacaaattcgataagcaacgtttcaaggaattaatccagaaaaaacacaaagaa
atcaagaaaaaggcgaaattggctgaaaaagacgacgacgacgatcaacaggaacaagat
gactttggaacagactcggaagaggaccaaccggatctctcatggttgccagatcccgat
aaagtctacaagggacgtcattcaacgttcgaaagtgacgaggaattcgatgcaagagtc
gccacaggcagtagcagtgaagaatcttccgacgaagaaccaatcgaggcaattcacaaa
ccacccacgaagcttgtcacgaaaaaagtcggcaaaaaacgtcaattggaagacgattcg
gaaagtgattcagctcctccagttgaaaacgattccaaaaaatccaagaaaaagcccaaa
acgaaggaaattgtcgagaatttgtctctcaacgaggctgaacaactcgccatgcaactt
ttgggataa |