Culicoides brevitarsis: 134836379
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Entry
134836379 CDS
T10947
Name
(RefSeq) ATP-dependent RNA helicase p62-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cbri Culicoides brevitarsis
Pathway
cbri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134836379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbri03041
]
134836379
03009 Ribosome biogenesis [BR:
cbri03009
]
134836379
Enzymes [BR:
cbri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134836379
Spliceosome [BR:
cbri03041
]
Complex A
U1 snRNP components
U1 related factors
134836379
Complex B
134836379
Ribosome biogenesis [BR:
cbri03009
]
Eukaryotic type
Pre-60S particles
Helicases
134836379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
CMS1
Cas3-like_C_2
LAGLIDADG_3
DUF934
Motif
Other DBs
NCBI-GeneID:
134836379
NCBI-ProteinID:
XP_063707674
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MLITKLFSTLFSRSYCTVSLRPILVNPLLNQIDTQNMAPHFRENKQKRSYHGVQQHNKFK
NNRFGGGAGGQSMNPKVLKEIDWSDTSKLTEIVKDLYCESDITKNRNLKEVKSFLETNQI
NTKGNQLPKPVLTFDEIQFPDYIKKEIQRQQFENPTAIQAQAWPIVLKGQNLVSIAKTGS
GKTLGFLLPAIMHINNQKASTYNARKGPMVLVLAPTRELAQQIQQVASQFGATSYIRNTC
LFGGSSRYAQERELRRGCEIVIATPGRLIDFLESGVISLEQVTYLVLDEADRMLDMGFEP
QIRKILSQVRPDRQTLMWSATWPKEVHNLAEDFIGNYSMINIGSMELTANHNIKQHVEVI
EDYKKDQRLVELLNELKDEHGNIRKTLIFGGTKRRCEKITSHLNRVGFRCVVMHGDKSQN
ERETALKKFRNDYAPILIATDVCARGLDVEGIDTVINYDFCQGIEDYVHRIGRTGRSTNL
GQSF
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgttaataacaaaactcttttccactcttttcagtaggagttattgtacagtatcgctg
aggcctattttagtgaatccgttgttgaatcaaatagacacgcaaaacatggctccccat
tttcgtgagaacaagcagaagcgcagctaccatggcgtacagcaacataacaagtttaag
aataatcgctttggtggcggcgccggaggtcagtcaatgaatccaaaggtcttgaaagag
atcgactggtctgacacctccaaactaacggagatcgtcaaggatttgtattgcgagagt
gacatcacgaagaatcgcaatctcaaggaggtcaaaagcttcctggagaccaatcaaatc
aacacgaaaggtaaccaattaccgaaacccgtgttgacctttgacgaaatccagtttccg
gactacatcaagaaggagattcaacgacaacagtttgagaatccgacagcaattcaggcg
caagcatggcccatcgtgctcaagggacaaaatttggtatctattgccaaaactggttcc
ggcaagacacttgggttcttgttgcctgccattatgcacatcaacaatcaaaaggcatcg
acctacaatgcccgcaaaggccccatggtgctagttttggcaccgacacgtgaactggca
cagcaaattcaacaagtcgcatcgcaattcggcgctacatcgtacatccgtaacacttgt
ctcttcgggggctcaagtcgttatgcacaagaacgcgaattgcgtcgcggatgcgaaatt
gtcatcgcgacacctggacggttaattgactttttggaatctggcgtcatttctttggaa
caagttacgtatctcgttttggacgaagctgatcgcatgttggacatgggctttgaacca
caaattcgcaagattttgtcacaagttcgtccggatcgacaaacattgatgtggtctgct
acatggcccaaggaagtacacaatttggccgaagatttcattggcaactactccatgatc
aacattggctcaatggagttgacagcgaaccataacatcaaacaacacgtggaagtgata
gaagattacaaaaaggaccaacggctcgtcgaattgctgaacgaattgaaggacgagcac
ggcaacatcagaaaaacattgatttttggtggcacaaagagacgttgtgagaaaatcacg
tcacacttgaatcgcgttggattccgttgtgtcgttatgcacggagacaaatctcagaat
gaacgcgaaactgcactcaaaaagttcagaaatgattatgcccctattttgatagctaca
gacgtttgcgctcgcggcctcgatgtcgaaggaattgatacagtaattaattacgatttt
tgtcaaggtattgaagattacgtgcacagaattggcagaaccggacgttcgacgaacctc
ggacaatctttc
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